Array 1 2106741-2104472 **** Predicted by CRISPRDetect 2.4 ***
>NZ_CP011642.1 Serratia marcescens strain CAV1492 chromosome, complete genome Array_Orientation: Reverse
Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion
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2106740 29 100.0 32 ............................. GCCTTGGAAGCTCGCTTGTTGATATCCTGCTG
2106679 29 100.0 32 ............................. CGAACTGGCCGAAATGTCGGTGCGCAGTTCGC
2106618 29 100.0 32 ............................. CCCCAAGGCGGCCATGACGTCAGTGCCAGTGA
2106557 29 100.0 32 ............................. CCTGGACTAAACCTCTTGTGCGGTGATTGTAA
2106496 29 100.0 32 ............................. GCCGTGGCCATGACGCCGGCGCAGCGCCAGAT
2106435 29 100.0 33 ............................. TCAGCTTTTGAGCGAACGATATCGTTCTCAGGC
2106373 29 100.0 32 ............................. TAGGTTGTGCGCCAGCAGTCATGCGTGGCCAT
2106312 29 100.0 32 ............................. GTCAACGTAACATTGCCGCCACTGTAAGATCG
2106251 29 100.0 32 ............................. TATCGGCATTTCATCGAAACCAGACTCGCTCA
2106190 29 100.0 31 ............................. TACGAATATGGCGGCGACTGGGATGGGTACA A [2106162]
2106129 29 100.0 33 ............................. GTGGCGGTAATTATTGGGATCCATCTGGTGAAC
2106067 29 100.0 32 ............................. CGGGCTGCGTTTATATCGCCGGTTAACGCCGG
2106006 29 100.0 32 ............................. AGGTGTTTGCCGTGGTGGCGCTTAGGGGCGAA
2105945 29 100.0 32 ............................. CAGCTTTACGGCAATGTGGATCTGCTGAAACG
2105884 29 100.0 32 ............................. CTGATTGCACGCGGCGGGCCACTGCTTTTTAT
2105823 29 100.0 32 ............................. TTCGGAAAAACCAACGTCTCCCCATCGAGCGC
2105762 29 100.0 32 ............................. GCGCGCTAACTGGGTTGAAAGATTCGGTATCC
2105701 29 100.0 32 ............................. GCTTGGGTATATACGCGATCCCATTTCTCAGT
2105640 29 100.0 32 ............................. GATTCTCGGTTGCCCCTGGCAATGGTCTAAAT
2105579 29 100.0 32 ............................. TATTGGGCAAGATTGTGTCCATGCCATTTTAG
2105518 29 100.0 32 ............................. GTGGCGTAATGAAACTAAATAGATACCCAGTA
2105457 29 100.0 32 ............................. GCATTGCAGCCAGCGGATTTCTGATTTCGTCG
2105396 29 100.0 32 ............................. GCACCGGCGCAGACCGTTACCTGAAGCTGCGC
2105335 29 100.0 32 ............................. GTGACGCGGTAGAAATATGGGTTGGTCTTCAC
2105274 29 100.0 32 ............................. GCACCGGCGCAGACCGTTACCTGAAGCTGCGC
2105213 29 100.0 32 ............................. GTGACGCGGTAGAAATATGGGTTGGTCTTCAC
2105152 29 96.6 32 ..........................A.. TTGATGGATGTTGCATCGGGCGCTTTGGAGGA
2105091 29 100.0 32 ............................. GCACGATTATCGCGCTATTACGGGCTGTTACA
2105030 29 100.0 32 ............................. CTGGCGTTTCACATGACAGGCCGCGTGATGGT
2104969 29 100.0 32 ............................. GAGGAAGAAGACGACGAAGCAGCCTTTACCGC
2104908 29 100.0 32 ............................. GCCGCCAATTCTTTTTGCGTCAGGCCGAGTTG
2104847 29 100.0 32 ............................. CGATTATGAGACCCTTGATAGGGCTATATAAA
2104786 29 100.0 32 ............................. GTGTCACGCTGTACAACCCGCGCACCATCGAA
2104725 29 79.3 12 .................ACC.T.G....C CATACGCGGCAA A [2104703] Deletion [2104685]
2104683 29 100.0 32 ............................. ACGAAATCCGGGCTTTCTCTGAGAAGGCGCAG
2104622 29 100.0 32 ............................. TAGATCGCATTGCATCCGGCGTTATGACAATA
2104561 29 100.0 32 ............................. TTGATAAGATCGCTGTTGATATCGCACAGCAG
2104500 29 82.8 0 ............T.........GG...AA |
========== ====== ====== ====== ============================= ================================= ==================
38 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Left flank : ACGCCGCGTTCAGCCCGGTAGACGTGGCCGGCGAAGACCGACAATGGGTGGCGCTGGCGCCGCTGGCGGTAGACGAAAGCCTGCGCCGCCAGGGGCTGGCTGAAAAGCTGGTTTACGAAGGCTTGGATTCGCTGAACGAATTCAGCTACGCCGCGGTGGTGGTGCTGGGCGATCCTGTTTACTACGGCCGCTTCGGTTTTAAACCGGCCGCCGCCTATGGCCTGCATTGTCGCTGGCCGGACACGGAAAGCGCGTTCCAGGTCTACTCGCTGGCGGAAGACGCCCTGAATGGCGTCAGCGGCGAAGTGGCTTTTTCGGCGCCGTTTAATTGCTTTTAACTTGTTGATAATTAATTTTAATTTGGTGGAAAAGGATTTCACCGAAGTGTATTTCAAAATTTGATTATAAATCAAATGGTTGTGTTTTTTCAGAAGGCGAAAATATTTGGTAGGATTTAAGGTCTTTAAAAATACATTTTAATTCAACCATATACTCTAAGA
# Right flank : TTGAACGCTCGCAATCACATAGGCAGCTTTGAAATGCAGGGGGAGGAAAAAACCACGTAATGAAATCTGTTAACCAGGAAGCAAATACGCCAACGACAGCGGCGGGTGATTCACCAGCCGCTCTTTTTGTATTTTGCTCAGCTGTTTGACGCGGTATTCCAGCTTCAGCGCCGTTGAGCGATCCCCCACCTGGCAGTGAAACGCTAGCGTCAGCTCCCCTTTACCGCGCAGCGCCTTGGCGCCTTTGCCGGCTTGATGTTGCGCCAGGCGGCGCGCCACGTCGGTGGTGATGCCGGTATACAGCATGCCGCTCGGTAAACGCAGCATATAGAGGTGCCAGTGGGGCAAGTCCATCATTGGGGTCCTGTGCAAGGGTAGAAACGACATCAGGCCGCCATAGCCAAGCGCGGTATCTCTATTTTGTCACGATTTAACGATGGATTTCACCACTGGCGGAACGGTTTGTTTATTCTGTCTTGACGATAAAGGGTTATTTTACA
# Questionable array : NO Score: 6.17
# Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1,
# Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat : NA
# Directional analysis summary from each method:
# Motif ATTGAAA(N) match prediction: NA Score: 0/4.5
# A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37
# Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37
# Array degeneracy analysis prediction: R [13-1] Score: 0.41/0.41
# AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27
# Longer leader analysis prediction: NA
# ----------------------------------------------------------------------------
# Final direction: R [0,5.92 Confidence: HIGH]
# Array family : I-E [Matched known repeat from this family],
//