Array 1 9676-10435 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSEL010000043.1 Klebsiella pneumoniae strain Kpngiani7132494, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9676 29 100.0 32 ............................. GCTGTCAGTACTCAACGTTATAGAAATTCCTC 9737 29 100.0 32 ............................. GAGTGAAAGTGATAGCAAGAGTGTAATGGCTA 9798 29 100.0 32 ............................. GCAACTATTGCCTGCATTGCTGTAGACAAATC 9859 29 100.0 32 ............................. AATCAATACGCCCTGATGCTTAAAAATGGCCG 9920 29 100.0 32 ............................. AGCAACGTTTCCGGATTATATGGCTGGAACGT 9981 29 100.0 32 ............................. TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA 10042 29 100.0 32 ............................. TGGTGTTGTCCACGGTTACCCGCTGGCTGGAA 10103 29 100.0 32 ............................. TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA 10164 29 93.1 32 ............CA............... AGGTATTTGACCTCATCCAGAAAGGCACAGAC 10225 29 93.1 32 ............CA............... GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 10286 29 96.6 32 ..............A.............. TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 10347 29 89.7 32 ............CA...........A... CACTACCAGATCCGAATGGACACCCGTAATGA 10408 28 82.8 0 ............CAC.......-.....A | ========== ====== ====== ====== ============================= ================================ ================== 13 29 96.6 32 GTATTCCCCCCGTGTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : ACATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCAAATCTTGCAGGTTGCAATCAGCAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCAATAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGGTTATATATACAGTGTTTTTAAGTGATCGGAGGTTGTGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAACGATTATTGCATCAGGCATC # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 87293-89820 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSEL010000007.1 Klebsiella pneumoniae strain Kpngiani7132494, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 87293 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 87354 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 87415 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 87476 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 87538 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 87599 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 87660 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 87721 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 87782 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 87843 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 87904 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 87965 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 88026 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 88087 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 88148 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 88209 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 88270 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 88331 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 88392 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 88453 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 88514 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 88575 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 88636 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 88697 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 88758 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 88819 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 88880 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 88941 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 89002 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 89063 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 89124 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 89185 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 89246 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 89307 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 89368 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 89429 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 89490 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 89551 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 89612 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 89673 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 89734 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 89792 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //