Array 1 151299-148580 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABASW010000008.1 Halomonas venusta strain DSM 4743 NODE_8_length_301067_cov_258.366, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 151298 28 100.0 32 ............................ GTCCAGTAGCTGGTCGGCAAACGAGTCGAAGC 151238 28 100.0 32 ............................ AGAAGAAGAAACGCCCGCCCCTAAGCAGAAGC 151178 28 100.0 32 ............................ CAATCACGGCAGCGGGAAGAGGAAAGCAAGGT 151118 28 100.0 32 ............................ TGGTGCTAGTGATTAAATCATTGGGGGCAGTT 151058 28 100.0 32 ............................ TCCAACGATTGCTACAGCACCGTTATTGGCTT 150998 28 100.0 32 ............................ AAAGGGAAATCACTGGCCTGGTGCTAACTATG 150938 28 100.0 32 ............................ TTTGGGCTATAGCCACGAGGACGGCAGCACAA 150878 28 100.0 32 ............................ AAAGATTGCTCAACGAGCAATCAAAGCAAAAA 150818 28 100.0 32 ............................ ATCAAGACCGGAGAACTCTAAATAAAAGTAAC 150758 28 100.0 32 ............................ AACCGCGTGCGCGGGTTCAACGAACTGTTCTC 150698 28 100.0 32 ............................ ACAACCAAGCCGACGAGCTGGCGAACCTGCTA 150638 28 100.0 32 ............................ TTGGCCCATTTTGGGGAGTGACTGGCTTTCGT 150578 28 100.0 32 ............................ AGTTTCGCCATGAAACCAGCCGAGAGCAAGAC 150518 28 100.0 32 ............................ TGCTGCTCGGTCTTGTTATTCGATAGCACCTG 150458 28 100.0 32 ............................ AGTGGCAAGAAAGTAAGCTTTACGGTGTGTTT 150398 28 100.0 32 ............................ TCCGCGCCCAGGCCCTCCAACGCAAGATGGAA 150338 28 100.0 32 ............................ CGTGGAAACGAAATCGTCCTGCCCAGCGTGAA 150278 28 100.0 32 ............................ TTGCCGACGCCAACGACCGCTTCTTTCGTCTG 150218 28 100.0 33 ............................ GCGATCGTTTTATGGACAAAGTACGGACTCAAA 150157 28 100.0 32 ............................ AGAAGTGATTTATCGAGCCAACCCGCTACCTT 150097 28 100.0 33 ............................ CTTTCATGTGATGGCCGTCATGCTCACTGCTAA 150036 28 100.0 32 ............................ ATGCCGGGTGATCATGCACCCGGCCGCAGGTA 149976 28 100.0 32 ............................ TCGACCCAATCCCCCCAAATACGTTCTCCTTC 149916 28 100.0 32 ............................ TGGCTGATGGGTAGTGAGCGCACCATGAAAGC 149856 28 100.0 32 ............................ TCATCTAGCAGCGCGGACTGATCAACCATCTC 149796 28 100.0 32 ............................ TGCAGCCGCTCAACGCGAACCTTGGTAATTTC 149736 28 100.0 32 ............................ CTGCGCAAGTTTTGGCAAATGGCCCGCTTCAC 149676 28 100.0 32 ............................ TTCGGCGCGGTGGTTTTACGTGTTGCCATGTG 149616 28 100.0 32 ............................ AAGAGATGACTGCCGCCGATCGCAAGCGGATG 149556 28 100.0 32 ............................ ACGTTGGAAGCATCCAGCATGCCGATCTCTCT 149496 28 100.0 32 ............................ AGCACCAGGCGCTTCCATTCGTTGCCGAAGAT 149436 28 100.0 32 ............................ GCTGAAATCCCAGTCAACGACTCTGAATTCGC 149376 28 96.4 21 ...........................G TGAGATTGCTAGTCCTAGTAT Deletion [149328] 149327 28 100.0 32 ............................ TGCATAGTCCATTTCGCACAGCACAACCCTGG 149267 28 100.0 32 ............................ AGCGAGCAATACAGGTAATGCGCGGCTTGCTC 149207 28 100.0 32 ............................ AGCACGTACTCCAGGTCGTCGATGCTCAGTTT 149147 28 100.0 32 ............................ TGCCCGATGATCGCCGCCGTAAACAGGAAGGC 149087 28 96.4 32 ............T............... AGAACCACCTAGCGCTGGATGAAGAACTAGAA 149027 28 96.4 32 ............T............... TGCTCTTCAAGATAGTCGTGTCTGTCGTACAC 148967 28 96.4 32 ............T............... ATTTTCCATTATTAGACCAAGAGAAAACACAA 148907 28 96.4 32 ............T............... TTACACGCCCAAGCGGCGGCTTTCACCTCACG 148847 28 96.4 32 ............T............... AGTGACTGGTTTCAAGAGCGGTGGCCTACCCC 148787 28 100.0 32 ............................ TAGGTACACCACGAGATGGGATGAATTACCCG 148727 28 100.0 32 ............................ GTGGTCGCTGGGGGCGCGGTGTCGTTCGGAAA 148667 28 100.0 32 ............................ TCTAATGTTAGATTTGATTTAACCGGGCCAGA 148607 28 78.6 0 ..................C...TT.GTG | ========== ====== ====== ====== ============================ ================================= ================== 46 28 99.1 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CGCGGCTGAAGCAACTGATGGGCGCTGACTGGCTAACCGGTATGCGCGACCACACGCAAGTCAGTGAGCTGCTTGCCGTGCCTGAAGGAGCGAAGCATATCAACGTGGCGCGCAAGCAGTTCAATACGGGCAGCCCAAGCCGCGCAAAACGCTATGCTAAACGGCATAACATCACAGAAGATGAGGCACGGCAGATCTATGCCAAGTTGGCTGAACGACGTATAGAGCTTCCCTTTGTGCAGATTAATAGCCGTTCTACCCAGCAGCGATTCAGCCTGTTTATAGAACACGGCAAGCCTCATGAAAACGCAGTAGCGGGTGCCTTTAACCACTATGGTTTAAGCAGTAACGCTACCGTGCCGTGGTTTTAACCCTTTTTTCTAACGTGAAAATTGGCAACCAATAATCAACCACTTAGCGGTGTCGCTCAAAAAAGGGTGATACCGCTTTTTTTGGCTAAAGCTCTTTAACAATCAGCACATTAATTTTGATATGCTCTA # Right flank : CTACCTGAAACTGGTATCGCTGTGCAGCGTTTTCGCGGGTGCGCTAACGCTTACGCCGCGCTACTCGAAATGTGCATTACCTTCATTAATTCGTAGGTTAGATGTTGCCGCCCAGACAGTTCAGTGTTTAGTCGGTGTGAATGCTCTCTCAGTTTCGGCGTCATCATCACAATGGTGCTTTAATTGTTAAATATGGTGAGGAAGAGAGTGTTCAAAAATAAAACTGCTTTAACATAATGATTGGGGTGTGTTTCGGTAACTGCCATCTAGAGGATATTACGTCGTGGAAAACTTTCTTGAGCAATTTGGAGCTTACGTTCCTTTGATTATCAATGCCGTGAAAGCATTGTTGGTATTGATTGTGGGCTGGATGGCTGCTGGGATCGTCAGCAGCTTAGTGCGTAAGCGGGTGAATGCGATACCGCGTATCGACCCTACTCTGGGCAATTTCCTTGCAGCCTTGGTGAAGTGGGGCATTCTACTGGTTGTATTTATTACGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //