Array 1 3291974-3294561 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP011624.1 Klebsiella pneumoniae strain CAV1344 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3291974 29 100.0 32 ............................. GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 3292035 29 100.0 32 ............................. ATCTATTCCAGCATCGAGCTGCACCCGCAATT 3292096 29 100.0 32 ............................. GTGGTTCGGGCGGCTCCGCGCAAAACCACGCA 3292157 29 100.0 32 ............................. CACCGCGTTGCTGTTCCCGCCGGTCGCCGCCG 3292218 29 100.0 32 ............................. ATATCGCCGTCGCAGTGGTAGAATCGGTCTTG 3292279 29 100.0 32 ............................. CCCGGAGGAAACGTGGCAACAGTTCAATACCC 3292340 29 100.0 32 ............................. AACGGAATTCAGTGGAGAGATGGGAAAGGTAG 3292401 29 100.0 32 ............................. AGGACGGCGAGCTGATCGCCGGACACGGTCGA 3292462 29 100.0 32 ............................. GGATACAAATCCAAACAGCGAGCCATTTTCCT 3292523 29 100.0 32 ............................. TTTATCGGACCGGGCGCGGACACGCAGACAAC 3292584 29 96.6 32 .............T............... GCGGGTTAGTTATCCATGGTGCATAGGGGCGA 3292645 29 100.0 32 ............................. TCACTTGATAGTTTATCTCGCCGCCGTGGCGC 3292706 29 100.0 32 ............................. GTGCGGAACAAACCAGTAGGTGTCCAGGTCGT 3292767 29 96.6 32 ............................T TTTTTTGACGCGTTCGGACTTCAGGTAATATT 3292828 29 100.0 32 ............................. GGTTTACCAGCGGTAAAACAGCAGGAAGGAGA 3292889 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 3292950 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 3293011 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 3293072 29 100.0 32 ............................. CCAATTCATTAAAATACTCTGCAAGTATATCG 3293133 29 100.0 32 ............................. CCGCTCCACGGTGAGCGGCTGTTCAATGTAGT 3293194 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 3293255 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 3293316 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 3293377 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 3293438 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 3293499 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 3293560 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 3293621 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 3293682 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 3293743 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 3293804 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 3293865 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 3293926 29 100.0 32 ............................. AACGTAATTGGCTTACGGGGCGGTCGGCACAA 3293987 29 100.0 32 ............................. TCGCCGCCTGTTTTTGTCTCTTTCCGGGTGAG 3294048 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 3294109 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 3294170 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 3294231 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3294292 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3294353 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3294414 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3294475 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3294533 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGTGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //