Array 1 228433-228790 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPQC010000004.1 Halomicrobium sp. IBSBa NODE_4_length_232814_cov_60.546, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 228433 30 100.0 35 .............................. GGTCGACGAGAGGTTGTCCCGCCAGCCCTGGCCGG 228498 30 100.0 35 .............................. CCCCACGAGAAGGCTGACAGCGTAGAGGAGATAAT 228563 30 100.0 35 .............................. ACGATCCCAGCGGCAGAGATTTCGGCGGACCTGTA 228628 30 100.0 37 .............................. CCGCCCCTCGACGACGCCCTCGGCGGCATCGGTGACG 228695 30 100.0 36 .............................. CTGACGAGTGTCTCGGCGGTCGCCGGGATCTCCTGG 228761 30 73.3 0 ............TA..G.A.T..CC...T. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 95.5 36 GTTTCAGACGGACCCTTGGGCGGTTGAAGC # Left flank : ACCTGTGTGGGAGACAGGTCTGTGAGAACCACTACGCCGAGAGCGACGGCATCTGTACCGCCTGTCTGGGCGACGCCGGGAGTCGACAGGACCGGCAGCCGGCGTCGGAGGACCTACCGGACGGCGTCGACACCTACGAGTTCTGAGACGGATCGTTGTGGACTGTTGATGCCGAACAATTCGATACAGGTTTGCACTTTCCGGATGTCACGCTCTGTTCCGCCGGGTTGCAGAGTCTCTCCGTCACCCACAGGGTAGTCGATCCGGTCAAGACGGGGTTTATGAGACTCGATAAGTGCGAATGTACACCCACGGAGAGCGTGGCTGGAAGATCGATTCCCACGTCGACGGGCCGCTCGTCGACGCCGTCGCAAGCGATTTGGCCACGTCGCCGGCCCGTTCCATCGACCCCCCAGGGGTTCAGGGGTTATTGCGGGTCGACGGAAATAGTGAAGTAAGTTCCGGCGTGATAGCCGCTATGGCCTCCAAATCGGCCATGG # Right flank : CGATTCGAGACCCGGTGCCGTCGTCGCCGTCGACAATCTCGAACAAGCACTCAAGGAGTGATGCTACGCTGTCTGTGGATTCAACAAAGCATCTCTTAGCTAAAGACGGATGCTCTTTGGATTACTACTGGTCCAGTCGGAAGAGCGCGGCTCATCACTCGGTAGCTACCCTGTATCAAAGTCGACTTATCGAACGGCACCGGCATTGGTGATCCCTTCACATGGAGTTAGCTTATCTGAACGCTTCTGCTGTAGGATAGAAACAGTGATGCAGTTCGGTCAGAAAGACTATACACATGAAAAGAAGGACATTTATCTCGGCATCTATCGCCAGTTTAGCCGGTTGTACGACACCACAACTTAGAAGCGAGTCTCGATCAAAGCCCGCGAACTCCAGTAGTAAGACGATTGATGAAGCGACGCCGATCGGTTCGATATCCGGAACATGGCCGACGACACACCGGACCAACGCTCGAACTGCTAACACCCCTGAATCACCG # Questionable array : NO Score: 6.04 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGGGCGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 179554-179909 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPQC010000006.1 Halomicrobium sp. IBSBa map unlocalized plasmid unnamed NODE_6_length_201004_cov_36.4261, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 179554 30 100.0 36 .............................. TCTGCCTGTCGAGCGCCCACGTCGTCGATGAAGCGG 179620 30 100.0 36 .............................. GGATTCTGGAAACCGAGGGTGGGAAGGACTCGTTCG 179686 30 100.0 32 .............................. CGCGCCGGGGCCGACTTGCTCGCGCACCAGCG 179748 30 100.0 37 .............................. GCTTACGGCTGGCGCGGCAATCTGTTTGAAGAACACA 179815 30 100.0 35 .............................. CTCCGTCACTGGGATATGTAGGTTATCTAGCTCGG 179880 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 100.0 35 GTTTCAGACGGACCCTTGTGGGATCGAAGC # Left flank : TTGATCTCCTTGACCGTGATCGTCGCCTTCGACGGGACGCCGTCGGGAGGGTTCTCGGGTCCGTCCTCCCGTTTGTGGGCTCTGTCGGCGTGCTCGCCGTCGCCGTCGTCGGCCCCATCCAGACGATCGTTCCGTTCGCGAAACGCTGCGAGCGCCTCGGCGTACTCCGCGACCTGGCGGAGACGAGTCAGCGAACACTGTTCGAGTCCGTCGCCGAGGTCATCGGGCAGGTCTGCCGGCGGCGTCGGTGGCTCGTCGCTCACTTCGATCTCCCTGTTAACCAACACGGACTCCAGCACCGTCGTTCTGTTGGTTAAGACGGTCGGACCGATCCCTCTGTCGCCGGTTTCCCGCCACGTCGACCGTGTCTCGCCTGCGTACTGATCGAGAGAGCACGCGTTTCCATCGACCCCCAGGGGGTTCGAGGGGTATCGAGGGTCGACGGAAACCATGAAATGCAAACGGCAAATAGCGATGTATACGTGGTCAAATCGGCCATG # Right flank : CTAGCCGGTATCGTCCGGCGACTTCCACAGCGCTTCCAGATCGTCCCGCAGATACCGGATCGATTCGTACCGATCCCGCTTTGCCGTCGCCAGCGCCGTGCGTACGATCTCGTCGAGTTCGGGCGGCACGTCGTCACGGCCGTCACTCGGGGCTGGTGGTGGCCCGTCGTCGCGGACGATCCGCTTGCGGACGGCGAGGCGTCCGCCGCTCACGGGGGGCTCGCCGCGTAGCATCGCGTACAGCACAGCGCCGACCTGGTAGATGTCCGTGACCGGGTCCGGTTCGCCGAAGGCCTCGGCGTCGAACTGTTCGGGCGCGGCGAAGTGCCGGGAGAACCCCTCCATCGAGTCGGTTCGGTCCCGCAGTTTTCTCGCGAGGTCCCAGTCGGCGAGCTTCGGCAGGTCCCAGCGTGACGGTGCCGTTTCGGTGAAGAGGACGTTCCCCGGCTTGACGTCCAGGTGGGCGATCCCGTACTCGTGTGCGACTTCGAGCGCGCGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGATCGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //