Array 1 162003-160038 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387150.1 Thermococcus sp. PK ThePKDRAFT_TPC.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 162002 30 100.0 37 .............................. TATTGCTGCTCTTGCGGCTAACCAAGTTTTTCCTACT 161935 30 100.0 35 .............................. ACACTACGTCATCATCAACCTCTTCGAGAATCTCT 161870 30 100.0 37 .............................. CCCTCAATGAGAATTGTTGCGTTCACCGTGTTTCCGT 161803 30 100.0 35 .............................. TTTTTTCAAAAACTGGAACAATCGTGCATCTACAA 161738 30 100.0 39 .............................. GCGGTTAAAAAGGTAGTTAATTATGTGAAACAACAAGGA 161669 30 100.0 37 .............................. AAAATACAACACCCAGCACAGTTTCTTAAAAACTGGG 161602 30 100.0 38 .............................. AAGCATAGTTATCTTTTTTGTGCTGGTCGTGGTTGCCC 161534 30 100.0 36 .............................. AAGGGTGTATTAGTTTATGAAAGACAGTATTTAGTG 161468 30 100.0 36 .............................. GCGATCACAAAACCAAAAACTGCAACTACCCACTAA 161402 30 100.0 36 .............................. ACCGCTGAGATGAAAAACTATGAAATCCCTGTGACC 161336 30 100.0 37 .............................. CAATAATCTGAATATCACCGTTTACTCTGAAAAATCT 161269 30 100.0 37 .............................. GTTGAAAAAAGTGAAATTGCTAAGAAATTCGAAATAA 161202 30 100.0 36 .............................. TGAACGACGTTGGTCGTTTTTTTGGTGTCTTAAAGT 161136 30 100.0 36 .............................. TTCGTACACCGTTGCTAACTTTATCTTATTAGGCGG 161070 30 100.0 36 .............................. CTTGTTTGCTGAAATTCTGTAAGTCTCAACTATGTT 161004 30 100.0 37 .............................. CCATGTGGGGCACGGCATTAATGTTTAACATCTACTC 160937 30 100.0 36 .............................. ATCCTCTCGGAAACCTATCGTTTGGCGTTATTATCC 160871 30 100.0 38 .............................. ACTTATAACAATCAACAAAAAATAAAAGAAAATCACTT 160803 30 100.0 38 .............................. AGGTATCTCTTCTTTGCCTTTTCTATTGCTTCGAACTC 160735 30 100.0 39 .............................. CTGTGAAGACAACATGGAAGCAGTATCCCAAATCTTCCA 160666 30 100.0 36 .............................. TTTACCCTTCTTAAAAACAAAACTCCCTTCTCAAGG 160600 30 100.0 36 .............................. AAACAACTTTTGAGCTTCCTTCAACGCATCCTCCCT 160534 30 100.0 38 .............................. ACGAGCGAAGGGACAACTACTGATGGCGATACGTTATA 160466 30 100.0 37 .............................. CATTTTGTCTATTTCTTTGAATATCTCATTTATTTCT 160399 30 100.0 37 .............................. TAAGGTATTCTTTGAATTAATTGCAGGATACATATAA 160332 30 100.0 36 .............................. TTCTTCACTGTAACCCTCATTTTGTATTTCCTTGAA 160266 30 100.0 37 .............................. TCCAGTTTTGTTAACACTAACGTACTGGTTAATCGCT 160199 30 100.0 36 .............................. ATTTTTGAAAACCCTGTGGGAGCAGAAATGCGTATT 160133 30 100.0 36 .............................. ATTTGTTGGTTATACACGTCGCTAAATTGTTGTTAA 160067 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 30 30 100.0 37 GTTCCAATAAGACTTTAGAAGAATTGAAAG # Left flank : CAACACCCAGCACAGTTTCTTAAAAACTGGGGTTCCAATAAGACTTTAGAAGAATTGAAAGAAGCATAGTTATCTTTTTTGTGCTGGTCGTGGTTGCCCGTTCCAATAAGACTTTAGAAGAATTGAAAGAAGGGTGTATTAGTTTATGAAAGACAGTATTTAGTGGTTCCAATAAGACTTTAGAAGAATTGAAAGGCGATCACAAAACCAAAAACTGCAACTACCCACTAAGTTCCAATAAGACTTTAGAAGAATTGAAAGACCGCTGAGATGAAAAACTATGAAATCCCTGTGACCGTTCCAATAAGACTTTAGAAGAATTGAAAGCAATAATCTGAATATCACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAGAATTGAAAGCTATTAAACTACTTCGCTTCCTTGCGAGGATGATTAT # Right flank : GAAGATGTTGTTACAAACCCTCGTCGTTAATAAATTTTAGATAAATTTCATTTAATCAGTTTCTTTTTCATTTCATATTCTCTTTTTAAGTTTTTGAATAAAACCCATCTCCTATAATTAGATCATTTTTTAAATTATTTTCGTAAACTTTAAATATTTTAATCGGGTAATATTATCACTAAGATGCCTCGCTGATGGAGGTATGAATTTGCGGTTCCTGATACGTCTCGTTCCTGAAAATTCGGAGTTTAAGGTTCCCTATAGTCATCAGCATTATCTTCAAGGCCTTATCTATCGCCGTATTCAACAAGTAAACCCTGACCTAAGTCTTGCCCTTCATCGGCCAAAAGTTCCAAAGCTCTTTACCTATTCTCTCTTCATGGCAGAGAAGAGGAGATCATCAAATGGCTTATCCTATTTTACCGGGAAAGGAAAGGCGTTCTTCTATTTTTCTACTCCGATCATAGAGATAGCAGAAGCCTTTATTGGTGGCCTTCTCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAGAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 2 163139-162176 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387150.1 Thermococcus sp. PK ThePKDRAFT_TPC.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 163138 30 100.0 36 .............................. AAAACTACTTACACAGCAACAGTAAAAGAGTAAGAA 163072 30 100.0 37 .............................. ACAGCTTACCGGAATTGATCCAAAAGCTGGACAGAGC 163005 30 100.0 37 .............................. ACTGATTTTCTCTCTAGTGTTCTGAGCTCTAATATAC 162938 30 100.0 37 .............................. CTATTAAACTACTTCGCTTCCTTGCGAGGATGATTAT 162871 30 100.0 37 .............................. TATTGCTGCTCTTGCGGCTAACCAAGTTTTTCCTACT 162804 30 100.0 35 .............................. ACACTACGTCATCATCAACCTCTTCGAGAATCTCT 162739 30 100.0 37 .............................. CCCTCAATGAGAATTGTTGCGTTCACCGTGTTTCCGT 162672 30 100.0 35 .............................. TTTTTTCAAAAACTGGAACAATCGTGCATCTACAA 162607 30 100.0 39 .............................. GCGGTTAAAAAGGTAGTTAATTATGTGAAACAACAAGGA 162538 30 100.0 37 .............................. AAAATACAACACCCAGCACAGTTTCTTAAAAACTGGG 162471 30 100.0 38 .............................. AAGCATAGTTATCTTTTTTGTGCTGGTCGTGGTTGCCC 162403 30 100.0 36 .............................. AAGGGTGTATTAGTTTATGAAAGACAGTATTTAGTG 162337 30 100.0 36 .............................. GCGATCACAAAACCAAAAACTGCAACTACCCACTAA 162271 30 100.0 36 .............................. ACCGCTGAGATGAAAAACTATGAAATCCCTGTGACC 162205 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 15 30 100.0 37 GTTCCAATAAGACTTTAGAAGAATTGAAAG # Left flank : CTTCTATCCTGCCCTTTTTTATTTGTGATAATGGTTGAGTCTGCTTGAGTGCTGGCGTAGGGTAATTTCTGGAGTTTTTCAGGAGGTGGTTTGTCAGTTCTTCGAGGTTCAGCTTTTCTCCCAGTTGTGGAGGGTTGAGTAGTGAATGTTTGCTCCGAAGAATTTTCTGCCGTAGTGCTGGGCGTCTCTGAGGGGTAGGTTGTAGTATTGTTTAAAGAGGAGTATTGCCAGTATTGTTTTACTGGAAATTTTTTGGATTTTGGCAGGTTCTTCAGCTTTCCTTCTGATTCGAAGTCTGCTAAAACGTCAAGAATTGCGAATGCCACGCTTTCAGGGTCTTTGAGTCTGTGATCCCATCTGGGGATCACGACAACCACCTGAAAGAATTCAGCAAAAACCCTAATAAAGGTTACTATAAACACGCCCCCCTTCAAAGAAAACCTTATAAAATTCAAGCAATATAATAACGTTATAGGCAAATCAAAGGAAAAATCGGCCCT # Right flank : CAATAATCTGAATATCACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAGAAGAATTGAAAGCTATTAAACTACTTCGCTTCCTTGCGAGGATGATTATGTTCCAATAAGACTTTAGAAGAATTGAAAGTATTGCTGCTCTTGCGGCTAACCAAGTTTTTCCTACTGTTCCAATAAGACTTTAGAAGAATTGAAAGACACTACGTCATCATCAACCTCTTCGAGAATCTCTGTTCCAATAAGACTTTAGAAGAATTGAAAGCCCTCAATGAGAATTGTTGCGTTCACCGTGTTTCCGTGTTCCAATAAGACTTTAGAAGAATTGAAAGTTTTTTCAAAAACTGGAACAATCGTGCATCTACAAGTTCCAATAAGACTTTAGAAGAATTGAAAGGCGGTTAAAAAGGTAGTTAATTATGTGAAACAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAGAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 3 468733-468152 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387150.1 Thermococcus sp. PK ThePKDRAFT_TPC.6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================ ================== 468732 30 100.0 38 .............................. CAGGTTGAACCTGAAAAGTGTATGTATATGCTTCCCAA 468664 30 100.0 38 .............................. CACTAAGCAAAAGGGCGTTTAATGACCAGGTGAAGAAA 468596 30 100.0 37 .............................. ATTATAAGCACAGAAAACTAGATGAAATAGCGAAGAA 468529 30 100.0 38 .............................. TTCTTTCCAGAGAACATAGGGATGACAGAAAATCCTTT 468461 30 100.0 36 .............................. ACAGTTATGACACTGGATGAGATGAAAGAAATTGTA 468395 30 100.0 38 .............................. TTTCGATAAAATTTCATGGAAAAATCAAAGGTTCGAAA 468327 30 100.0 48 .............................. CTCTATAAGGTCTTGAATTGTAACGTTCTGGGGTTCTTTCTCTTTCAA 468249 30 100.0 38 .............................. TTCCTTGATGTTTTGGATTTGGTTGTCGATGTCTTCTT 468181 30 90.0 0 .................A....G......T | ========== ====== ====== ====== ============================== ================================================ ================== 9 30 98.9 39 GTTCCAATAAGACTTTAGAAGAATTGAAAG # Left flank : ACTACGTGAGTGAATAGCCGAAGATTCTTTGTATCACGTTTAGCTTTTCCTTTTTTGGATTTTCTTTCTTCTGGTGGGCCAGTTTTGATTTTAAGGCTCTAAGGTTGCTCTGGAAGTCTTTAGTAACTAAAAGTTACTATCAGACAAAGAGTTATGGTATTTTGGAGGTTTTGTAACGAAATTTTTTCGAAATTTTGAGCGGAGGTTTCTCAGGACTTCTTTGATATTCTCTCCTCGTGGAAATTTAACCTTTTTGGATTTAATGCTTTTTTGTGGTTTTATTTTTGTTTTAGGTTTCTGTCTTCTCTCTGGAAGTCTCGTGAACAAGATTGGACATGGAGAAATTTGAAGGTTTTCGTTTACAAAACAAGCCTAAACTCTTAGTTAATCACTGGAATTAAAGGCTCCAAAATACTGTTTTATTGACCCTTCGGGGAAAAGTTTATAAATTTCAAGCCCTCTAATTACTCTATAGGGGATTTAAAGAAAATTTGCCCCCT # Right flank : GCTGAAATGTAAGGCACCTTAACCCAAACCACGGCCTGTTCCAAAAAGACTCCTGACATCCTCTACCTTCTCACCAGTTATGAAATATGAATGACGAAGTGATATTCTCCCCTTACCTGAACCCCCGACATCTCGAAAACGCTGGGTTTTTAAACTCTCACCCTTCTACTTTACCATATATCAAAGGGGAGGGTGAGAGAATGGACAAAGTTTATCTCACATGGTGGCAGGTTGATAGGGCAATCTTCTCACTTGCTGACAGCTTAAGAGAATACAAACCCGACTTCATCGTTGGAATCTCAAGGGGAGGCCTTATTCCAGCAGTAAGGCTTAGCCACATCCTCGGAGATGTGGAGTTCAAGGTAATCGACGTAAAGTTCTACAAGGACATAGGAGAGAGAGGAGAAAAGCCTGTGATAACAATCCCCCTCCATGGAGACCTCGAAGGAAAGAAGGTTGTAATAGTAGACGACGTCAGCGATACCGGAAAGACTCTCCAA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAGAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA // Array 4 523368-523867 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387150.1 Thermococcus sp. PK ThePKDRAFT_TPC.6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 523368 30 100.0 39 .............................. TAATACATCTTTATTGTTTCACTTCCTGAGGCTGGTATA 523437 30 100.0 37 .............................. GACAAAGTGCGGTTACTGAATACGGACTATTTAACGA 523504 30 100.0 37 .............................. TATATGGATTTTTGGCTCATAGAAACGCTTCATCTCC 523571 30 100.0 36 .............................. CCAACACAGCGGCTTTTAGAAGTCATAAAGTCATGG 523637 30 100.0 36 .............................. CTTCAGATTATTTCAGTAAAGAAAGTGATGTTTGTT 523703 30 100.0 38 .............................. CTAAAAACGCTTATATTAGCTTTAGCGGAATAACGCCG 523771 30 100.0 37 .............................. TAATACATGTAAATGGTTGTCTGCCCGTTAGCGGGAA 523838 30 96.7 0 .................A............ | ========== ====== ====== ====== ============================== ======================================= ================== 8 30 99.6 37 GTTCCAATAAGACTTTAGAAGAATTGAAAG # Left flank : TTAAGGATGTTTTAGGGCTTTGTTTTTGATTTTACCTTTTGTTTTGTCTCTGGAAGTCTTGTGAACATTTTTGTGCATTGAAAGAAAAGTAGTAAGTTCAGGCGAGTGAGTGCTTTAAAGTCTTGTTTGAAATCTTGGATTTGAGCCTTCTTATGGCTGTTTTATTGACCCTTTGTGGGGGCGTGTTTAGTTTCACCCCCTGTTATTTAAACAGTATTTGACTCTGAGGAGGATTTTCAGACCATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGATAGGCCTCCGGGTGATGTTATTGAATGGCTTCAGGAGGTGATGCCCCAGTTATCCTGACAATATCAACACGCCCCCCTTTGTGGAAAGGCTTATAAATTTCAAGCTTTCTAATTACTTTGTAGGGGATTTAAAGGAAAATTCGCCCCT # Right flank : GAGCCTTAGTTGGAGTAGCAAAGCTAAGTTAAGATCTCGTCAAGTCTATCTTCTTCAATTGCCTGCCTTATCTCTCTGGCAATTCTCCTTCCAGTGCTCATTGACTCGTTGTATCTGAGCCATGTGTAAGGGGAGCCGTTTATGAAGGGATTCGTCCCGGCAACGATTCTCGCTGAGATTTCAAACACCACGAATTCCATGTCCTCTGTGATAACCCCCTCAAGGCAGAAAGGCCCCCAAAGTCCTCCCATAAGCTTTTCCGCCGCTTTTACCACTCTCTCTCCAGCCTCGATTATATCCATGAGCAGGCTTTCCCTAAGCACTATTGGTATGTTTCCTACGACGGTATAGCTCGTCTCCATCCCAATTTCAAGCTGCTGCTCTGCGCTTATCCTTCCTATCGCATCTGCATTGCTTTCGTATCTCTTGTCCACGCTCATAAGCTCAAGCTCTTTGTTGAGCTTCGAGTAGAAGAAGTGTGGGTAAACGGGAACACCTAT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAGAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 12463-11556 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387149.1 Thermococcus sp. PK ThePKDRAFT_TPC.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 12462 30 100.0 39 .............................. GCGTGGCTTTTTCGTGGAAGAAGTTTAAGCACCGTGCAA 12393 30 100.0 36 .............................. CTCTTTGACAATTTCTTGTTTAAGTTCCTCTTCAAG 12327 30 100.0 36 .............................. TAAGGTGGGGTACGCGATGGCGGGGGGCGGGGGCGC 12261 30 100.0 37 .............................. CAAGCTTGCTTAGTTCCAGCTCCCTGCTATCTTCCAG 12194 30 100.0 37 .............................. AGGTCGTCAAAAAGGCAAAAATACAGCATGTAAAGAA 12127 30 100.0 38 .............................. TATGCAAAAAAATATATAACAATTGCGGTGGTTGACAC 12059 30 100.0 38 .............................. CGTTGCCTGGCTATTGCTCACGCTCTGGGGGTGAGAAA 11991 30 100.0 41 .............................. TGATATAGAGGATAAAGACCTTGCTATGGTTTGTTTACTAA 11920 30 100.0 37 .............................. TTTTTTGTTATGCTCATTATATAATATGTGTCTGCAG 11853 30 100.0 36 .............................. AGTTGCAAAAACTCCAGCCTTGCCCTGCTTTCCTGA 11787 30 100.0 37 .............................. TTTCACACTCACACAACAGATGAGTTAAACGCTAAAG 11720 30 100.0 37 .............................. GATAAAGTATTAGCAGAGCTTCAAGAAATATTTAATG 11653 30 100.0 38 .............................. TTCAAACCTTACCACCTCTTTCATTACCAACACCTCCT 11585 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 14 30 100.0 38 GTTCCAATAAGACTTTAAAAGAATTGAAAG # Left flank : TACAAGTCAGAATAATTGCAAAATAGCACGTTATCATGTTTAAATTTTCTCTTTTTGGATTTTCTGCCCTCTGAAGGATTAATTTTGAGTTCAAGGCTCTAAGAATGCTCTGGAAGTCTTTAGTAACTGAAGGTTACTATTAAACAAAAGGTTACAAAAATTTTAAAAGTTTATAACGAAATTTTTTCGAAATTCTAAACAAAGACTTTTTAGGACTTCTTTGGTATCCTCTCCTCATGGAAATTTAACCATTTTTAGTTTAAGGCGTTTTTGTGAGCTTATTTTTGATTTAAGCTCCTATTTCGCCTCTGGAAGTCTCATGAACATTCTTGAGCATTGACAAAAAGGAGGAGTTTCAAGTGTGGTTGAGTTTCAAGGTTTCTCTCAAGGGCTCGAATTCGAGCTTTCTGAGGGGAGTTTTATTGACCCTTTGAAGAAAAGTTTATAAGATTCGGGCCTTCTAATTACTCTTTGAGGAGTTTAGAGGAAAAATCGCCCCT # Right flank : AAAAAGAGTTGGACAGTTATGAACAACACTTTTAAACCTCACCAGCTACTCTATTTTGATGATAGCGTTAGGAATTGAGGGGACTGCACACACACTTGGCATAGGGATTGTGACGGAAGATAAGGTTCTCGCCAACGTATTTGATACTCTAACAACCGAAAAAGGTGGCATACACCCAAAGGAAGCCGCTGAACACCACGCAAGGCTCTTAAAGCCCCTTTTGAAAAAAGCCCTTAGAGAGGCTAAAATCAACATTGAAGATGTTGACGTAATTGCTTTTTCTCAAGGGCCAGGACTGGGGCCGGCTTTGAGGGTTGTGGCAACAGCCGCGAGGGCTTTGGCTATAAAATACAACAAACCCATTGTCGGGGTCAACCACTGCATCGCCCACGTGGAAATTACGAAGATGTTTGGAATAAAAGACCCGGTTGGCCTCTACGTAAGCGGGGGCAATACTCAGGTTCTTGCATTAGAAGGCGGTAGGTACAGAGTATTTGGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAAAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: R [matched GTTCCAATAAGACTAAAATAGAATTGAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : III-B [Matched known repeat from this family], // Array 2 579983-578004 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387149.1 Thermococcus sp. PK ThePKDRAFT_TPC.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 579982 30 100.0 37 .............................. TAGGGCCTTAGCTAAACTTATGGCCTCGTCCACCTTA 579915 30 100.0 36 .............................. CCTCACCGTTGTGGATCACAAAGCCGTATCCTTCGA 579849 30 100.0 37 .............................. AAAGAGTTGTTTGATTTTTGTTTTTCAGTTTTAATGG 579782 30 100.0 37 .............................. TAGTGTTTAGTTTGCCTTATCAAAAGCTCATGCTGAA 579715 30 100.0 36 .............................. ATTTTGTAATACTTACAAAAATTTTGTATTATCTAT 579649 30 100.0 40 .............................. GCGTCTGTGCGGTAACCGCCTACTCTGACGGGTAAGTCGC 579579 30 100.0 39 .............................. TCAATGTGTCTGACGCTAACATATCACCTGCATCATCAG 579510 30 100.0 39 .............................. TTTGAAGATCCAACATAAAAGGAGTTAAGCCCTCCCCAA 579441 30 100.0 37 .............................. CTAAGACCCTCTTCACAGCACTAATTTCCTTGTCGAT 579374 30 100.0 37 .............................. CTCCTTAAACTTCTTCTTATCTACCTTCACTTTCTCA 579307 30 100.0 35 .............................. CCCTCCCACTGCTTTTGGTTTTTGTGTGTTGGCTT 579242 30 100.0 37 .............................. GTGCTACGTATTCCCGTTCACCTTCCTTGCCTATACG 579175 30 100.0 36 .............................. TATTCATTAACTGTTTAGGATCGTGGATGCCGTAAA 579109 30 100.0 38 .............................. ATAACAGCACAAGAGGCCCTAAACCGCTTGATGAATTA 579041 30 100.0 38 .............................. ATACATCCCTTTCCACCTCCTTCAGAGGTAGAAAAAAT 578973 30 100.0 36 .............................. TGAGATGCTTTTAACAATGTATTTCAGAAAGGTGAT 578907 30 100.0 38 .............................. GGAGTGGTAACAAAGAAGCCCAGCTAAGCCTTAACGGC 578839 30 100.0 39 .............................. TGAGTGAGTTGAAAAAATTTCCACTCAGACGATATCGGA 578770 30 100.0 37 .............................. AATATAACGCCTCTTCCGACGATATGACCTTTTCCTT 578703 30 100.0 37 .............................. ATAAAAAACGCCTCCGTGCGCCCGCCTCTGTAGGAGA 578636 30 100.0 36 .............................. CTTTAGTCTCCTCATCGATGTGTGCCTGTAAAAGCT 578570 30 100.0 37 .............................. TGGTGAAAATAAGCGTATTTATTATACGTTAGTGCTA 578503 30 96.7 37 .................A............ TATATGTATCCGGCGCTGGTGGTATTCTATCGAGTGA 578436 30 96.7 36 .................A............ TGCCGGGAGAGACCGAACCATACGTTTTACCACCAG 578370 30 96.7 37 .................A............ ATCCTCAAAGGTCTTGGTAATGTAGGCCCGTCAAAAA 578303 30 96.7 38 .................A............ GAAGAGGTAGTGAGTGCGTGGAGGGAAAACCTTCGCGC 578235 30 96.7 36 .................A............ GAAAAAATTAAAAGGTTACTCGAAATGATAGACCAC 578169 30 96.7 38 .................A............ AAGTCAATAGACCACAGCCAGGATATAGATATTTCACT 578101 30 96.7 38 .................A............ AGGAAAAAGTTAAAGAAACTCTTGAGTTTCAGTTTAAA 578033 30 86.7 0 .................A.........GTA | ========== ====== ====== ====== ============================== ======================================== ================== 30 30 98.8 37 GTTCCAATAAGACTTTAGAAGAATTGAAAG # Left flank : AACACGCTTTCTTTTATGTTTTTTGGAATGTTATCACGTTAGAATAGTCCTATTTTTAGTTCACTCTTGTATTAGAGAATTAAATTTGAAATCATTCTATAAGAGGGTTTTGGAAGTCTTTAGTAACTAAAAGTTACTATCAGACAAAGAGTTACAAAATTTTGAGGTTTTTGTAACGAAATTTTTTCGGAATTTTGAACGGGGTCTTTTTAGAGCTTCTCTGATACTCTCTCCTCGTGGAAATTTAACCTTTTTGAATTTAAGGATGTTTTAAGGCTTTGTTTTTGATTTTGGCTTTTATTTTGTCTCTGGAAGTCTCATGGACAAGATTGGACATGGAGGAAAAAGAGTAAGTTCAGGCGAGTGAGTGCTTTGAAGTCTTCTCTAGTGGCTTGGATTCGAGCTTTTTGAGGGGATTTTTATTGACCCTTTGTGGAAAGGCTTATAAATTTCAAGTTCTCTAATTACTTTGTAGGGAGTTTAGAGGAAAATTCGCCCCT # Right flank : TGAGCCTTTCTTCCCTGTTTCTGCTCCTATAGTAGAAGACATGGCTTCTTCTCCATAATGATTATGTTAAACTGTCTGTTAACTTGAGAGCTCATTTGCAAAAACATCACAAAGAGAATCAGGAATTGGAAAAATCGAAGAGCTAACATTAATGTATACCCTAGCATTGTATGTACACATATGTTCAGAAAAGCTTATATATGAAGTTGGTTGTTAATTTACTGAAAGTACTATATACTACTACAAGTACATGAGGTGTTAAACATGAGAAAATTAGTGTTTGTCATGTTGCTCCTTGGAATTTTGGGTTTTAGTGTAATAGCAAGTGGGTGCATTGGGGGTGGCAAAACAACTAGCACAGCAACACAAACACAGTCTTCAAGCCAAGAAGAACAGAAGATTATTGAACTCGAATTCTGGCATGGGATTGAAGCCCCAGAAAACCAAAAGGTTCTCGAAGAACTAGTCAACAAATTTATGGAGAAACACCCAAACATTAG # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAGAAGAATTGAAAG # Alternate repeat : GTTCCAATAAGACTTTAAAAGAATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 3 722217-724516 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387149.1 Thermococcus sp. PK ThePKDRAFT_TPC.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 722217 30 100.0 39 .............................. TGCTAGAGAGAGCGAAGCGGGAGGGAATTAACATAAGTG 722286 30 100.0 40 .............................. TGCTATCTCTACAATCTTGCCGCTTCTTATCAGTTCAGCA 722356 30 100.0 36 .............................. TTCAGAAAAGAGCTGTTTTCTTTGGCTACAAAACTC 722422 30 100.0 36 .............................. ATTGAACTCGTAAGCGTTAGACCATGCAGTTCCTCC 722488 30 100.0 37 .............................. TTCATCTCATAATACAGAATTTTGTTTGAGTGAGGAA 722555 30 100.0 37 .............................. GTCATCGGGCTTGCAGGTGTTCTCATGGGCATTATGT 722622 30 100.0 37 .............................. CATGTCTTTCAGAGACTGATACAGCAACGCCGTGCCG 722689 30 100.0 33 .............................. TTGCGACACCACTGAACTCCAGTTTAAACTCTT 722752 30 100.0 37 .............................. TTTGTGAGGCAAAAACTATGTTTAAGTGAGTATCAAG 722819 30 100.0 37 .............................. TGAAATTAAACCGTACTCTTCGAGTGTTGATAGGTAT 722886 30 100.0 37 .............................. CGTTACGTCGGCATTTGATAGGGGAGGATCGAACTTT 722953 30 100.0 38 .............................. TTGTGTGTCCTATACGTTTCAGTTTTCTCTATCTCTTC 723021 30 100.0 36 .............................. TTGAACTTGAACCATAGCCGGAACATCGAAGACGAA 723087 30 100.0 35 .............................. GACGCTATCGTTATAACCCCCGAAGTGCATAGCCA 723152 30 100.0 34 .............................. ATTGAAAGCGCGGTTGGATGGGTCAAAGACAAAT 723216 30 100.0 37 .............................. CTAATCCTCTCATTAATCTCAAAATCCTAAACGCTTC 723283 30 100.0 36 .............................. AAAGCAAGCTCGTAAAACTCCTTATCTAACTCATAA 723349 30 100.0 37 .............................. GGAGTGGAGTTAAAGCCCCTAAGATGAAATGAAAAAG 723416 30 100.0 37 .............................. GCAGGTCTATATAAATCAAGTAATCCATCCCTCACTG 723483 30 100.0 37 .............................. TTAAAAATTTAGAAAGAGAGCGGAAATTATCGGGCTT 723550 30 100.0 35 .............................. GAAAGCAACATTATGTGCACTTCAATCGCTCTATA 723615 30 100.0 39 .............................. GAAATATCTAACGCAATTGCTCAATCGAACGACACGCAA 723684 30 100.0 38 .............................. ACCCCAATCCCGGCTATTTCTGCAGTCATGGTCATCAG 723752 30 100.0 37 .............................. TTTCAATTTCCTTGTTGCCTCTTGTTGCCCCTGGCGA 723819 30 100.0 37 .............................. CGAGAACTAAGATTGCATGTATCGCTGCATCAGCAAA 723886 30 100.0 37 .............................. TTAACTTCATTGAGAACTCGTTGCTGAGGATGAAGCT 723953 30 100.0 38 .............................. ATAATGATATATTTATTAACCCCTGGAAGAATTTTCCT 724021 30 100.0 37 .............................. TTAATTTTCAATTCTGCAAATATACGCTTAACCATCT 724088 30 100.0 37 .............................. GGCTTCCAGAGCCTGCAGGGCTTCAACGGCGACATCT 724155 30 100.0 37 .............................. TGAAATATTGCCACTTGTCTATAACATCAAACGCTAT 724222 30 100.0 35 .............................. GGGAGTGGTGGGGTTTTTGTGCTCCTCAGCTGTGT 724287 30 100.0 38 .............................. TGAGCTCGTTCACATACTGTTGGACTGTTGCAAACAGG 724355 30 100.0 36 .............................. GTTTTGCTCCCTTGAACCCATAATCATCTGTGATGG 724421 30 100.0 36 .............................. GAGAAAAAGACAACTTTTAGGATAGTTGCATACAAC 724487 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 35 30 100.0 37 GTTCCAATAAGACTTTAAAAGAATTGAAAG # Left flank : GAAAACTCAAAATGCTTATCCAATAGTCTTGTATCATGTTTGGATTCTCTCTTTTTGGTTTTTCTGCTTTCTGAAGGATTAATTTTGAGTTTAAGGCTCTAGGAATGCTCTGGAAGTCTTTAGTAACTGAAGGTTACTATCTTACAAAGAGTTACAAGTTTTTGAGAGTTTTGTAACGAAATTTTTTCGAAGTTTTGAGTTGAGGCTTCTTAGGGCTTCTTTGGTATTCTCTCCTCGTGGAAATTTAACCATTTTTAGTTTAAGGCGGTTTTATTGGGTTATTTTTGATTTAAGCTCCTATTTTGCCCCTGGAAGTCTTATGAACAAAGTTGGGCATGGGGAAAAAGGAGGAGCTTTAAGTAGGCTAGAGCTTTAAAGTTTTTTCTGGAAGCTCGAATTTGAGCTTTTTGAGGGGAGTTTTATTGACCCCTTGAAGAAAAGCTTATAAGATTCAAGCCTTCTAATTACTCTTTGAGGAGTTTAGAGGAAAAATCGCCCCT # Right flank : GCGCTTAGGCGAAATCTTAAAAACAATAAAAGCGAAATCAAAGAACTCTTTCCAGGATTTCCCTCAGGTCTTTCAAAAACTCCTCAAGGTGCTCCCTCTTTACGTGGGGCATCATAACTATCCTTATGTACCCCCTGTGGGCGCTTATTCCCCAGCCTCTGGCTTTGAGCTCGGCCTCAATTTTCTTAAGCTTCCTGGAGCCGAAGGAGACTATGTTCAACATGGGCTCCCTTATAAGGTATACCCCATTTAGACCCTTTATTTGCTCCGCGAACCAGTAAGCATTTTCCATAGCCTCCTTGACAACTCTCTTGTATCCTTCAAAGCCAAGATGCTTGAGGAGGGCCCATACTGCTATTGCATTTGCACCTGGCCTAGTGCCGGTAATGGTCGCCTGGAATATCTTTCCTCCAGCTAAATAAGGTGCTAAAACGTTTATGGCCTCTATGTACTTTTTCTTTCTAAAAACTATCCCCCCAGCAGGGATTGGGGCCATGCCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATAAGACTTTAAAAGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: F [matched GTTCCAATAAGACTAAAATAGAATTGAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : III-B [Matched known repeat from this family], // Array 4 820712-819131 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE387149.1 Thermococcus sp. PK ThePKDRAFT_TPC.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================= ================== 820711 29 100.0 40 ............................. GAAATCTAGAAAGAGATTTGAAATCATCGACTGGCTTTCT 820642 29 100.0 37 ............................. ATGCCCTCCTCGCTTATGTTGCAAGATGCTTCGTCCA 820576 29 100.0 39 ............................. TCACAAAAGTTAGCACAACGTCGCCGTGTGCAGTGTCCA 820508 29 100.0 40 ............................. AAGTAACCCCTGCCAATATGCAAAATCCTCTCTGAGGTCT 820439 29 100.0 36 ............................. TAGGAGGTGGAAGAATGAAGTTCTTAAAGAAGATCT 820374 29 100.0 40 ............................. ATCATAATGTACTCATTCTCCCCACCAATGCGCATCCCGT 820305 29 100.0 42 ............................. CTTCTTCTTAGTACCGCTTTTTCTTCTTTCGTCAAAAATTTA 820234 29 100.0 39 ............................. CCCTCCTCAAACTTAAAACTCCCTTCTCAAGCCTTGTGG 820166 29 100.0 38 ............................. ATGAACTTGAGTATCTTGGACTTGAGTACAAGTGCAAA 820099 29 100.0 37 ............................. GAAACATAATATTCATTGACAACCATGCGGAGGTGAA 820033 29 100.0 37 ............................. TGGAACCTGAACCCCCAAAACCAAAGCATACAAAGCC 819967 29 100.0 36 ............................. ATCTTATTTCCGTTGATGTCTTCACCTTCTATTTTC 819902 29 100.0 38 ............................. TGTTATAGTACAGCAAGTCTCCCTTCTTCTTGATCTCT 819835 29 100.0 45 ............................. CCATAGTAAACCCTGAAAGTGTATAACTTTGAATTCTCTAGAACC 819761 29 100.0 39 ............................. TTTTTTATTGGAAAACATAAAAGGAGGGTTGGAAAATGG 819693 29 100.0 38 ............................. GCGGTTCGTGTTTTTCTAAAATAACTTCCCCCTTATAG 819626 29 100.0 38 ............................. ACCAACCGGCGTAAATACTGCGGTCCCGTCTTCCTTGA 819559 29 100.0 38 ............................. ATTCATAAAAATATTCTGCCAACTCGTCTGGGCTGCAC 819492 29 100.0 37 ............................. CTTTTCATTTATCCAGTCTTGATAGCCCGAGAGTGAG 819426 29 100.0 37 ............................. AATCTTGCGGTGTCGTTAGTGATGTTGGTCGTAACGC 819360 29 100.0 40 ............................. CGCTGTATATATGCGCTTGGCGTGTCGTGGGTTGATAAAC 819291 29 100.0 36 ............................. AACGTCTGTGAAATTGTGTCTTCCAACAACTACAAA 819226 29 100.0 38 ............................. AACAGGTGATGCTTTTGGGCTGGCGCATGGTCAGGGAG 819159 29 79.3 0 ................G.....C..TGGT | ========== ====== ====== ====== ============================= ============================================= ================== 24 29 99.1 39 GTTTCCGTAGAACGTAATCGTGTGGAAAG # Left flank : GTGCTACTCTTCGATGGGGAACCGGTTTTCGTGTTTTGAAGCTCTTTTTTCCTTCTTGTTCGTCCTTTGTTTTTGGTTTTAACTGCTTTGAAAAGTGTACACGAGGTTTAAAATGCTCGGAAGGGTTTTCGTTTTCTGTTTACCCTGTCAGTGGTAAGGCTTTGCCAAATGGATACGTTTGACGGAGAATGCATGGAAAGTCCCGGATAAGCAAATTGCGTGAAGTCCGTAGAGTTTGAATGGTTGAAAGGGTTTATATGACCATGGATTTTGTTTTCAATGGTTCTACCGCCCACAGATTTGCTAAATTTGGTTTCGATTTTTGGGAGGAGGTTTTCGGGTGCTTTAAGGTAAGCGGAGACGATTTAGTGCTTTTTGGCGGCTTTTTCATTTTTGCATCAAGTTTATAAATGGAGCGCAGTGCTACGGGTTTCCAGAGAAAGCCTTAAATAGGAGTTTGAAGATTACCTTATTTGTCAATCAGAGGAAAAAAGTGAAAG # Right flank : GCTATGAAGAAGCCCGTGTACATAACCCAGATGGGCGTCCTCGAGAGGAGGGGCAACACCCTCTTCTTCGAGAACGAGAACGGTAAGAAAGCCATACCCGTGAACTCTACGAGTGAGGTCTACTGCTTTAAACCCGTGACGCTGACGAGCGGGGCCATAAAGCTCCTCTCCGAGAAGGACGTTCCTGTACACTTCTACAACAAGTATGGTTATTACAGAGGCTCTTATATGACGGTCGAGGACCAGGTGAGCGGGAGCGTTGTCATAAAGCAGGCGGAGCACTATCTCGATGAAGAAAAGCGCCTCTACATAGCAAAGCAGTTCGTCGAGGGCATAAAGGCCTCAATGCTCGCACTCCTTAAATCCTACCGCGCCGATGCCTCGGCAATTGAAGGGATTCCCGTCGATGGAGAAAGCCCGGCCGAGCTCATGGGCGTTGAAAGCACCCTTTGGAAGGAGTTCTACGCCCTCTTCGGCTCTCTCCTCAAGAACTTCGAGTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCGTAGAACGTAATCGTGTGGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //