Array 1 156572-153444 **** Predicted by CRISPRDetect 2.4 *** >NZ_QVFA01000004.1 Faecalibacterium prausnitzii strain AM39-7BH AM39-7BH.Scaf4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================================================================================================================================================================================== ================== 156571 28 100.0 33 ............................ TAGCTGTTTGGCACTGTGCCGCTTAATGCTGAT 156510 28 100.0 33 ............................ CGAGGCCGTCCGCGAGCATACCCGCCGCGAGAA 156449 28 100.0 33 ............................ TCTTGCCCACGCCCTGAAACCTCCGCCCGTGAA 156388 28 100.0 33 ............................ TGATAGTCATATCGGGGTCCATGCTGACCGTCT 156327 28 100.0 33 ............................ CTTGTTCGGGGTCATTGGAACAAGGTTTGCCCG 156266 28 100.0 33 ............................ TCCGACTTCAGCACGACCCGCCGGACAATCAGC 156205 28 100.0 34 ............................ TCAATGCCATTGGCTACACCCCCTTTCTGTATCG 156143 28 100.0 33 ............................ CTGCTGGATAAGTCCCATCGGGTTTTGTCCGAC 156082 28 100.0 33 ............................ CAGGCCTCGCGGCAGATCTCGACAACGTTCTCG 156021 28 100.0 33 ............................ TGTGCGGGCTTGTCTTTCACATCCAAGTGTAGT 155960 28 100.0 33 ............................ TGAGTCTGTTTTCCGGCATCAGTGCCGCCAGTA 155899 28 100.0 33 ............................ GATCTCCGCCACTGGCACATCGGGCAGAGCCGG 155838 28 100.0 33 ............................ TACTGCGAAGAATGGTTTGACGTGTACGATGAA 155777 28 100.0 33 ............................ TTCCTGATGGAAATAAAAAGGTTTTTGCAGATG 155716 28 100.0 33 ............................ CTCTTTATTGTATAGCTTTGCTCCCTCAGTAGC 155655 28 100.0 33 ............................ CATAAGGTACAGGGGTTTCCGGCTCTTGGTATA 155594 28 100.0 33 ............................ CGAAAGCTCTTTCACGAAAAGTTTTGAGGAACA 155533 28 100.0 33 ............................ TCAGATACACAAACTTTACACACATTGATGTGC 155472 28 100.0 33 ............................ TGTCCACGGTGTCCATGGTGGCCTGTTGCTCGG 155411 28 100.0 33 ............................ CATCATTGGAAGATGAACTACATCAGTGACCCC 155350 28 100.0 33 ............................ TGCGGCAATGTCGGTTTTGGTAAAACCTGCGTT 155289 28 100.0 33 ............................ TATCTGCGTCAAAACCTTCTTTTCTCAGAGGCA 155228 28 100.0 33 ............................ CCGTGGCAGTGCTAGACAAGATGCTCAACCGCC 155167 28 100.0 33 ............................ CCGTGGGAGCGGTTGCGCCGGGAACCTGCACAG 155106 28 96.4 33 .................A.......... TCGCTTGAAGTTGTTCCAGAGAATTCTGTTTGG 155045 28 100.0 33 ............................ TAGCTGTTCGGCACATTGCCGTTTAGTGCAGAT 154984 28 100.0 33 ............................ CAGCAAGACCGCACTATCACATGATACTGTACG 154923 28 100.0 33 ............................ CAACTCCCGGGAGAGAAATGCCGGAAAACCTAG 154862 28 89.3 33 .......T......T............T GGACGATGCCTACTACGAGAAGCTGGCTATGGA 154801 28 100.0 33 ............................ TGACCGCTCAGGAGCTGGAGACCCGGCAGGCTG 154740 28 96.4 33 ..............T............. CTGCGGTTCGTTCTGCACGATGAGCGTTCGCGC 154679 28 100.0 33 ............................ TGATGATTCCACCTATCCCTTCATCAGCTACCT 154618 28 96.4 33 ............T............... TGTGCGGCTCTACCAGCCGGACAAACTCGCCGT 154557 28 89.3 33 ............TG.........A.... CACTCTGCAACTGCTCATACGCCTGCTGTTCGG 154496 28 85.7 33 ........T...TGT............. TACCATGTTGTCCCACACGAAGGGCTGATAAAA 154435 28 96.4 203 ........................C... ATGGAATGATGGGCACAATGCAGGAGTGTTCAAGCTTAACCTGAGGATGCAGAAGCAAATTACAAGAAAGAAGGTGAAACAATGGAACATGAATATGAAGCACTATTCAGAGCGATTTTGGAGCTTATCGACAAATGCGACACGATTGAAGAATTGCGTGAGAGCGTGAAGCGTATCATGGGCGAGGGTTAAGCTGAGATGCA A [154413] 154203 28 96.4 33 T........................... TGATGCGCAAACTGTTGATTTCTTCCTTCAGGT 154142 28 92.9 33 ............A.T............. TCCTTTCCGATGTGATATCATCAAGGTGATGGG 154081 28 92.9 33 ............T.T............. TGCCCCGACCGACCTGCGCGGGCGGCCCATCAA 154020 28 89.3 33 ............TG..........C... CTACCCCAAAATCATCCGCAAGAAGGGCCTGAC 153959 28 92.9 33 ............TG.............. CAGCCCAAGCCCCGGCACCGTCTGCCTGTATGC 153898 28 92.9 33 ............T.T............. TAACTTCCATGATTTCATTCCTTTCATTCCTGA 153837 28 85.7 33 .C..........TGT............. TGAACCAGAACACCATGAACAACCAGGTTGGCA 153776 28 92.9 33 ............TG.............. CTACTGCCATTTCCCGTCCAACCCGGAAGCGGG 153715 28 92.9 33 ............TG.............. TGCCATCGACCAGTCCCCCAAAAAGTACATCAA 153654 28 85.7 33 ...........TTGT............. CTATGTGGTGCTGTACCAGATGCTCTGCCTTAT 153593 28 100.0 33 ............................ TTTCACGGATTTGATGACCCACCGATAGCTGCC 153532 28 96.4 33 ............T............... CAGTTCAGCAGTCTTGAACCTATCGCCCAGTTC 153471 28 85.7 0 .......................TCCA. | ========== ====== ====== ====== ============================ =========================================================================================================================================================================================================== ================== 49 28 96.9 37 CTTTTCCCCGCCCACGCGGGGGTGATCC # Left flank : GCCGCCTCAGATGCCATTGTGGAATACGGCGCTCTCCGTGTGCGGGATGGTCAGCCTGCCGAAGAATTTTCGGCCCTTGTCCGGGGCACAGAACCTCTGCCGGATGTGGTGGCAAAGCTCACCGGCATCACGCCGGAGGAGCGGAGCGGCGGTATGGAGCCGCTGGCCGCGCTGGAGGCGTTCCTCGCATTCGTGGGCAAAGACACGCTGGTGGGCTATCACCTGAAATTTGACCTCGATTTCTTGCGTGCGGCCTGCATTCGGAATGACAGACCCCTGCTTACCAACCGCAGCATCGATGTTTTGCCCCTTGCCCGCCGTAAGGTGTCGGGGGTGATGAACTATAAGCTGCTCACGCTGGCCCGGCATTTTGAGGTTGCCCAGCAGGAGACCCATCGCGCCCTGCCCGACTGCCGCCTGATCCAGCAGGTCTATGCAAAACTGAATGAAACGGGATCGGCCCGCTGATAAAAATGCCGCTTCTATGGGATCTTTTTAGT # Right flank : ATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCGCATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGTTACGGCACCGATCCCTATTGCGCCAGTGCGCGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGCACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCTGCCCACGAGGCCGGTGCCATTGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACGGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATATGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCACCCGTCGG # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.32, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCCCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.20,-12.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [34-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //