Array 1 992616-996307 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024173.1 Klebsiella pneumoniae strain KSB1_9A chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 992616 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 992678 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 992740 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 992801 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 992862 29 100.0 32 ............................. CACCTCGCCTATAAATCGTACCAGCCTGACAG 992923 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 992984 29 96.6 32 ............................C CGATCGACCTGGGTGATACGCAGGGCGTGCAG 993045 29 100.0 32 ............................. ATTTTTCATACCTGGCCGGTTGTCTTCAGGGA 993106 29 100.0 32 ............................. GCCATCACTGCCATAATCGAACGTTGATAAAA 993167 29 100.0 32 ............................. CGTACGAATGGAACAAACCGCGCCCGGCTATC 993228 29 100.0 32 ............................. TAACTCCAGCTCGCCGATGCGCTGGCGCAGTT 993289 29 100.0 32 ............................. ACGTCGATAACGAGACCGTGCCGGGACTGAAT 993350 29 100.0 32 ............................. TTCCGTTTTCGTGTAACCAGGAGGGACGTTGA 993411 29 100.0 32 ............................. AGATCGCAGCGTTGGGCCTACAGGTTGTTCCA 993472 29 100.0 32 ............................. CGCCCATGTTTGCCCGGCTACGTACCGCCAGA 993533 29 100.0 32 ............................. ATCCACCGTGACCACGCCATCCTGGTGCAACG 993594 29 100.0 32 ............................. TGACAGCACAACTTGCGGGCTGGCCTACGCCG 993655 29 100.0 32 ............................. CTATCCGGCAGTTTGACCAGTCATTGATTGCA 993716 29 100.0 32 ............................. CCGCCGATCCCGGACGGGCCACTAAGCAGCGC 993777 29 100.0 33 ............................. CGTGCGCCTGCGCATTTCGCCATATCGTTGTGC 993839 29 100.0 32 ............................. GCTGGCTCTTTTCCTTCTGCCGCTCGGCGGTC 993900 29 100.0 32 ............................. CCGGTGGAGCGCCGCGGGCGAGAGGTTCTCTA 993961 29 100.0 32 ............................. CCGCTCTTTGTACGCGACGCCGGACGCTGCGA 994022 29 96.6 32 .......T..................... TCGCAATAGGCACTGTCAGCATCCAGAACGTA 994083 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 994144 29 100.0 32 ............................. TTACACAAGAGAAGCACTGACAACCATTCACA 994205 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 994266 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 994327 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACAATTTCG 994388 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 994449 29 100.0 32 ............................. CGCACGGTGCATTCACGCCCGCGCGCCTGTTT 994510 29 100.0 32 ............................. CATCGCTTTCCATCGCAGCTTTTTCCAGGCGC 994571 29 100.0 32 ............................. GTGACGCGCTGCAGTTTGCCAAAACCCTGCCA 994632 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 994693 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 994754 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 994815 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 994876 29 96.6 32 A............................ GGTTTATAGAGGCTGAGGTATTCACAATGCGC 994937 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 994998 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 995059 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 995120 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 995181 29 100.0 32 ............................. GGCTCGGTTGATATTGCCCGAAGTACGGCGGA 995242 29 100.0 32 ............................. ATTTCGCACACGTCCATTACGAGGTTTTTACA 995303 29 100.0 32 ............................. TTAGAGGGGAATTATCAGCGAAAGAAAGTGAA 995364 29 100.0 32 ............................. GTTCGAGCAGCAATTGCGTGATCACCCGGATC 995425 29 100.0 32 ............................. TTCCATTGCGACATATTTATTAACCCTACTAA 995486 29 100.0 32 ............................. GAGGGGCCATGGAGCCGGTGTTGATTGCGTCC 995547 29 100.0 32 ............................. GACGTAAACGAATTATTTAATCTTGACAGTTA 995608 29 100.0 32 ............................. CTATCTAACTAAGCAAGGCGATATGCTCGACC 995669 29 100.0 32 ............................. AACCTGCGGTTTCGTGTATGCCGGATAACTGT 995730 29 100.0 32 ............................. GCTATGGGAGTTAATGACATGGAACAGAAATT 995791 29 100.0 32 ............................. GCTCTTCTTCCTCCGCGAGTTCTGCATACGTG 995852 29 100.0 32 ............................. GATTCTAATTGACGTTGTAATAATCGTGTGTG 995913 29 100.0 32 ............................. AAAAACGTTCCAGATTCACGGATAGCGGAAGG 995974 29 100.0 32 ............................. TAAAGGTTAGACATTGGTTAGTTCCTCATTGT 996035 29 100.0 32 ............................. CATAATCAGGAGCAAATCAGATGAGCTATAAA 996096 29 100.0 32 ............................. GCGTAACGGGACGCGGAACCGACAGGAAGCCC 996157 29 100.0 32 ............................. CAATCAACAGGTGCGGAACCGGTTCAAGAATA 996218 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 996279 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 61 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //