Array 1 297-7 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNWU01000021.1 Halopenitus malekzadehii strain IBRC-M10418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 296 30 100.0 36 .............................. ACTCGGTGTCGCAGACTATCAGATAACTAACTAAAC 230 30 100.0 32 .............................. GAAGATGACCAGGCCGCGGAACTGAGGCACGA 168 30 100.0 36 .............................. GGAGATGATCGTCCCGTTTTGCGGTGAGGCAGAGTC 102 30 100.0 36 .............................. CGAAAGCAGGAACCGCAGAGACACGCGTTCAGTTCC 36 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 100.0 35 GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Left flank : TGGAACGAACTGTCGAACATCCATCGCTGGACCGGAAGGTCAGCTATCAATACCTTATGCGGCTCGAAGCCTACAAGCTGAAGAAACACCTACTCACCGGTGAGGAATACGATCCGTTCCAACGGTGGTGGTAATATGTACGTTGTGATGGTCTACGATTTGGAGGCCGACCGTACGCAGAAGGCTCTCAAACTCGGTCGGCGGTACTTGACCCACGTCCAGAACTCAGTACTCGAAGGCGAAATCTCAGAAGGCGATCTGGCTACGTTGAAAAACGAGGTCGATGACCTGCTAAACCCCAGCGAATCAACGATCATCTATGAGTTATCCTCCGATACACTCCTGAATCGGACAGTGTATGGAGACGATCCGACCGAAGACCAGCGGTTTCTATAGCCACTTCCGTCGACCCCCACGGGGGACGCGACCTATTGAGGGTTGACGGAAGCGCTTTACTGTATCCACACGTTAGTGGTCGTATGCTCCGGAAATCGGGCATG # Right flank : CCGAGCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 43010-42262 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNWU01000013.1 Halopenitus malekzadehii strain IBRC-M10418, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 43009 30 100.0 35 .............................. GAGAATACGATCGTCGGTTTGGGTCATCCAATCAA 42944 30 100.0 36 .............................. CACCGCGCGTCAGGCGTCAGGAGTTGACTGATTAGA 42878 30 100.0 35 .............................. ATCGACCGTCGACCGATACGCCTCTCAAGAACCAG 42813 30 100.0 34 .............................. TCCTCGAGGCGGTCGGCCTCCTCCGCTCGAGCGC 42749 30 100.0 35 .............................. CGGACACGACCACGCCACCCACCGGCCATATCCGC 42684 30 100.0 35 .............................. TCGTCTAACACGACTCTAATCTCGGATTGGATTTG 42619 30 100.0 34 .............................. CCCGTCGGCTTTGTGGACTCGTTCTTCCGTAACC 42555 30 100.0 35 .............................. GTACAGGCCACAGTCGCCACACGAAACGACGTATA 42490 30 100.0 36 .............................. CACCCGGACAGCGTTCGGCGTGGGCTCCGGCGGATC 42424 30 100.0 36 .............................. TGGGGAAAATCGCCCGCAAACGCAAAGCGGTCCGTC 42358 30 100.0 37 .............................. TCGAGATTTACAACACGACGACTGAGGATGACGTCCA 42291 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 100.0 35 GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Left flank : TGT # Right flank : CTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAGACGAACCCTCGTGGGGTTGAAGCCGAGCGATTGACTCCGGTACCCACACGTCTTACAGTTTCAGACGAACCCTCGTGGGGTTGAAGCCCTATTCGGCACCGTGAGGCTAAGTTCGGCACCCGTGTTTCAGACGAATCCTCGTGGGGTTGAAGATCCCGGCTGATGGAGGCCCGGATGCGTCGGGGTCGAGCTTCAGACGACTCCTCGTGGGGATGAGGCAGAGACCCCGAGAAAACGTCGATCGAGGTCCTCACGATCGCTACGATCGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.00,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [1.7-3.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //