Array 1 45-795 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCKY010000015.1 Enterobacter cloacae complex sp. P10RS 1701062106_S59_R1_(paired)_contig_15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 45 28 100.0 32 ............................ AGCACACCACTCGTACGTCCAATAAGCACTTT 105 28 100.0 32 ............................ GTCGCGCTCAACCATTTTCCGGCGCTGTGCTG 165 28 100.0 32 ............................ GTACATCTATGATGCGGTATTTGCTCCCCTGC 225 28 100.0 32 ............................ TGGCGAACCTTGCATCAGAGAAGTCTTTTTAT 285 28 100.0 32 ............................ GCGTTCGTATGCGCTGGTCGCCTGATAATCAT 345 28 100.0 33 ............................ TGAACGTGACGCGCACGCGTGGGGGGGACATCT 406 28 100.0 32 ............................ AGGTTCCGTTGACGTAGTTGTACGTAAGTGCT 466 28 100.0 32 ............................ GCATAACTTTCGTCGTACGCATCTCGGGAACG 526 28 100.0 33 ............................ GAAAAAAACAACCCAACCATTAACAACATTGAG 587 28 96.4 33 .....T...................... GACGATCTGGAAGAAGCGGCAGCCCTCGCTAAT 648 28 96.4 32 ................A........... TTCAATCGAATTAACCGACAGTACCGGGAGTA 708 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [733] 768 28 71.4 0 ......C.T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 13 28 96.4 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCAGCTTAGAAATAACCATCACAAAATGCACAAAAACATAATAAG # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACAACA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 161748-162375 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCKY010000003.1 Enterobacter cloacae complex sp. P10RS 1701062106_S59_R1_(paired)_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 161748 28 100.0 32 ............................ ACTGGCACCTGCCCCAGCATCCCAAAGATAGG 161808 28 100.0 32 ............................ TGGCGCACAGAGGGCGAGGCGCACGGCTACCG 161868 28 100.0 32 ............................ TGCGCGAAACCAGACCAGCGCACGCGGGACGG 161928 28 100.0 32 ............................ GTCCCGGCGGGGTTAGCCGGGATGGTCGCAGC 161988 28 100.0 32 ............................ AGGGCGATTTCAAACACGCGCTTATTCATCAG 162048 28 100.0 32 ............................ ATGACGCTGGCAACCGCCTTGCCGTTGATCAT 162108 28 100.0 32 ............................ GAACAGGCAGCAGAGCCCGCCCCGCGCGGGCT 162168 28 100.0 32 ............................ GGGGCAGGTTCCAGTAGGCAAGCAGTACGATT 162228 28 100.0 32 ............................ GACGAGCGAAACCGCCGATTTTACGGCGTACA 162288 28 96.4 32 .....A...................... CGCCAGACGTGGGGCGAGCAGGTAAGCGCAAT 162348 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 11 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTTCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGAGCCTACCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGAAGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTTGAAGATACAGAAACGAAGTGTGATTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCTTCTTACAGGACTGCTCCATGACATCACGCATTCTATGGTTGCAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAGTTCACATTATTTCCTGAATGTAGTTTGTGACGTCCGAAGTAGGCCCCTGACGCCACCGGCTAGACCCTTTTTTTTTATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTACCAGAAAAAAGGGTTTTATGCAGGAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTAGTTTCCTTTCA # Right flank : ATTGTCAGTCTGATGAAAATAAAGGGCCAATGCGTTCACTGCCGTACAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAGGCAGCTTAGAAAGGTGAATATGTCCCGCCACTGGCCGTGGAAGTGTTCACTGCCGTACAGGCAGCTTAGAAATCTTTTTGCTCCTTTTTGTCATCCGTTGACATGTTCACTGCCGTACAGGCAGCTTAGAAACGCGAGGCCGCCGCAGCTCTTGGGATTAACCCGTTCACTGCCGTACAGGCAGCTTAGAAAAGCTGTTCGCCGGTCATTGGTTTATTGGCTGTGTTCACTGCCGTACAGGCAGCTTAGAAAGGTTGCAGCATAGTGCTTAAGTGCATCAGTTTTGTTCACTGCCGTACAGGCAGCTTAGAAATCATGGGGGTGGCCTGACAATGCTGAATTTTTGTTCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 162568-163499 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCKY010000003.1 Enterobacter cloacae complex sp. P10RS 1701062106_S59_R1_(paired)_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 162568 28 100.0 32 ............................ TCTTTTTGCTCCTTTTTGTCATCCGTTGACAT 162628 28 100.0 32 ............................ CGCGAGGCCGCCGCAGCTCTTGGGATTAACCC 162688 28 100.0 32 ............................ AGCTGTTCGCCGGTCATTGGTTTATTGGCTGT 162748 28 100.0 33 ............................ GGTTGCAGCATAGTGCTTAAGTGCATCAGTTTT 162809 28 100.0 32 ............................ TCATGGGGGTGGCCTGACAATGCTGAATTTTT 162869 28 100.0 32 ............................ TTGTGAAGCACTATGGCGGTAACTACCAAGGA 162929 28 96.4 33 ....................T....... AAATCGAAGCGAGTGGGAAAAGAACAGTCACAA 162990 28 100.0 32 ............................ TGTCATATCGCCAATACTGATTGATCGACTTT 163050 28 100.0 32 ............................ GTGAACAACATTGAGCTGAGGTTGCAGTTAAT 163110 28 100.0 33 ............................ CACCAGCTGCATCCATGCCCCGAACCCCAAAAT 163171 28 100.0 32 ............................ TCGAGCGTCATCGTTGGGGTTGATTTGGATTT 163231 28 96.4 32 ..........T................. TGCATTGCTTCTGCGTGGATTTGATCGAGGGT 163291 28 100.0 32 ............................ CGACGCGATTCAGGTCACCGGCACAAGTCAGT 163351 28 100.0 32 ............................ CTGCGGAGCGGGGGGACCAACTTCTGAGGCGC 163411 28 100.0 33 ............................ CGTGTCGGAAGAGGGACAGGGAAACGGGGCGTT 163472 28 92.9 0 ................T......T.... | ========== ====== ====== ====== ============================ ================================= ================== 16 28 99.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTTAGAAAATGACGCTGGCAACCGCCTTGCCGTTGATCATGTTCACTGCCGTACAGGCAGCTTAGAAAGAACAGGCAGCAGAGCCCGCCCCGCGCGGGCTGTTCACTGCCGTACAGGCAGCTTAGAAAGGGGCAGGTTCCAGTAGGCAAGCAGTACGATTGTTCACTGCCGTACAGGCAGCTTAGAAAGACGAGCGAAACCGCCGATTTTACGGCGTACAGTTCAATGCCGTACAGGCAGCTTAGAAACGCCAGACGTGGGGCGAGCAGGTAAGCGCAATGTTCACTGCCGTACAGGCAGCTTAGAAATTGTCAGTCTGATGAAAATAAAGGGCCAATGCGTTCACTGCCGTACAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAGGCAGCTTAGAAAGGTGAATATGTCCCGCCACTGGCCGTGGAAGT # Right flank : AGCCCCTCTGGGCTTTAATGCCGTGGAAATAGCGTTACTGTCCCATAGACAGTACAAGTAAACCCATTCCTCACAAATATTCATCTCGTCTATTTAAAACGAAATACCATCATCCACACGCTTTCCATTTGCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTGTAAAAATAATACTTTTAAAAAATGTTGTATTTTTGTTGAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATATCCGCATTCATTACCTTGAAATAAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGGAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAATA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 173056-173203 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCKY010000003.1 Enterobacter cloacae complex sp. P10RS 1701062106_S59_R1_(paired)_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 173056 28 100.0 33 ............................ GCAGCCGGTCACGGTGACCATCCCGACGCAGAG 173117 28 100.0 31 ............................ GTCCGGGCATTATTTACGATATGCGTGACCA 173176 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 100.0 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATCCCGGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGTATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGATGGAGTGGAATTGGTTTTTTTTTGTGCAGGGTGGTTTGTGAGAAGAACAATGTTTTGACCCTAATTTTTAACGGTTGTGTAATTCATTGATTTTAAATGAGTATTTTGGGTGGATAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : ACATCCTGGTCGCCATCGTCGGGGACAACATCGGTGCACTGCCGTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAGGCAGCTTAGAAAAAATTTCGTTAAGCTCCGGGTAGTTGAGCATTGTGCACTGCCGTACAGGCAGCTTAGAAAGATGCGATTTGCTGCGCTGAGGTATCGCAGAAGTGCACTGCCGTACAGGCAGCTTAGAAAGATATCCAAACAGCCCAGGTCTGAATAAACTGGTGCACTGCCGTACAGGCAGCTTAGAAATAGAGCAGCGTTATTTCACGCTCTCGTTTTCGGTGCACTGCCGTACAGGCAGCTTAGAAAATTGGCTTATTGAATCCGTATGTCTTGCGCATGTGCACTGCCGTACAGGCAGCTTAGAAATAATTCTTTCGTTCATCCCGACTACGGGATAAGTGCACTGCCGTACAGGCAGCTTAGAAAAAGACAGCTTAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 4 173363-174110 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADCKY010000003.1 Enterobacter cloacae complex sp. P10RS 1701062106_S59_R1_(paired)_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 173363 28 100.0 32 ............................ GATGCGATTTGCTGCGCTGAGGTATCGCAGAA 173423 28 100.0 32 ............................ GATATCCAAACAGCCCAGGTCTGAATAAACTG 173483 28 100.0 32 ............................ TAGAGCAGCGTTATTTCACGCTCTCGTTTTCG 173543 28 100.0 32 ............................ ATTGGCTTATTGAATCCGTATGTCTTGCGCAT 173603 28 100.0 32 ............................ TAATTCTTTCGTTCATCCCGACTACGGGATAA 173663 28 100.0 32 ............................ AAGACAGCTTAACATTAGCTAAGACGGCTAAT 173723 28 100.0 32 ............................ TTTTGCGGCGCAGATATGCGTGTGATGAATAC 173783 28 100.0 32 ............................ TTACCAGGACAAAATGCACAAAAACATACTAC 173843 28 100.0 32 ............................ AATGCACCACTCGTACGACCACGACGAAGGGT 173903 28 100.0 32 ............................ TATACAGTTACAGACGCGATAAGAGACGAGCA 173963 28 100.0 32 ............................ TGTATAACTTGCCCCGCGTGCTCGTCGTCAAT 174023 28 100.0 33 ............................ AAGATAAAAAATGAGATGAGGAAGAAGAATATA 174084 27 78.6 0 A.AA.A.A.-.................. | ========== ====== ====== ====== ============================ ================================= ================== 13 28 98.4 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCAGATGGAGTGGAATTGGTTTTTTTTTGTGCAGGGTGGTTTGTGAGAAGAACAATGTTTTGACCCTAATTTTTAACGGTTGTGTAATTCATTGATTTTAAATGAGTATTTTGGGTGGATAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCAGTGCACTGCCGTACAGGCAGCTTAGAAAGCAGCCGGTCACGGTGACCATCCCGACGCAGAGGTGCACTGCCGTACAGGCAGCTTAGAAAGTCCGGGCATTATTTACGATATGCGTGACCAGTGCACTGCCGTACAGGCAGCTTAGAAACATCCTGGTCGCCATCGTCGGGGACAACATCGGTGCACTGCCGTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACAGGCAGCTTAGAAAAAATTTCGTTAAGCTCCGGGTAGTTGAGCATT # Right flank : AACATGCGGAAT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //