Array 1 182458-179930 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIUBQ010000003.1 Klebsiella pneumoniae strain 6409.78 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182457 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182396 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182335 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182274 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182212 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182151 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182090 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182029 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181968 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181907 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181846 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181785 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181724 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181663 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181602 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181541 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181480 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181419 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181358 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181297 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181236 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181175 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181114 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181053 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180992 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 180931 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180870 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180809 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180748 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180687 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180626 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180565 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180504 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180443 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180382 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180321 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180260 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180199 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180138 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 180077 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 180016 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179958 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //