Array 1 74644-73943 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLAB01000002.1 Klebsiella grimontii strain 2880STDY5682622, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 74643 29 100.0 32 ............................. CTTGGCGATCTTGTTCGTGAGGTATTCGGAAG 74582 29 100.0 32 ............................. ATTGACCAGGCTTCCGCTGACCGACTGTTGAA 74521 29 100.0 32 ............................. GCACTGACACACGAGGAGCTTTGCCAGTTAGC 74460 29 100.0 32 ............................. ACTCCCTTCTTGCCTGCTTCCACTGCTCTGAT 74399 29 100.0 32 ............................. TTATCTCAGGATATGAGTAGAACAGCAAAAAA 74338 29 100.0 32 ............................. GTTTGTTTCTGTCTCTTCGCGCATTCCTTAAG 74277 29 100.0 32 ............................. AACGGGCGCAGATATCCATAGGTCCACGTAGC 74216 29 96.6 32 .........A................... TTACTGGAGATCTGATGCACTTGCGTTCAAAT 74155 29 100.0 32 ............................. AAGATCAACCCGCGGATGAACACATTGATGCC 74094 29 100.0 33 ............................. GCCAGTGAACAGCCTGGCGCTGTGGCTGAATAA 74032 29 100.0 32 ............................. GCGGTGAACTCAGTTGCAAGTGGGCAGGGTGA 73971 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 12 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCAAACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 305331-306213 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLAB01000003.1 Klebsiella grimontii strain 2880STDY5682622, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 305331 29 100.0 32 ............................. GTTACACGCAGGTTTCAGGCTCTGGCCTGAAT 305392 29 100.0 32 ............................. GCGCAGAAATAATGATAACTGGATTAATATTC 305453 29 100.0 32 ............................. GGGTATCCCATGCCTTTAGACTCTGAAGCCGC 305514 29 100.0 32 ............................. TTCGCCATATTCACAACGCCCGCGCCACCGGT 305575 29 100.0 32 ............................. ATACTTGATCGGTTTTGCCGTATTTTTTTGTT 305636 29 100.0 32 ............................. CATCACTGATAGCTTTCGGGATTTTGTTGATC 305697 29 100.0 32 ............................. TACGCCTTCTTGTTCGTCAGCGGGTCGACGTA 305758 29 100.0 32 ............................. TTTTTGGCTTGAAAATGCTTTTTGTGGATAAC 305819 29 100.0 32 ............................. CTGCTGGGCGTGGCCTGCGCTGTAAATACGTT 305880 29 100.0 32 ............................. GTTAATCATGCGGTTCGCCAGCTTATCAGTGA 305941 29 100.0 32 ............................. TGTTCGATATCACCGACGAGGTAGACATAGCG 306002 29 100.0 32 ............................. CTTATCTTGAGCAACCGCGCAACCGCCTTGGC 306063 29 100.0 32 ............................. TTTCTCCGCCCATAGGTACAGGGTTTGCGTAC 306124 29 100.0 32 ............................. CCTAAAACTGGCGTCACAACAATAAACACCGG 306185 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 100.0 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGATGCTGGTGAGATTGAGCCGCCTCAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTAATATTCTATTAAATTTAATCAGTTAGGTAGTGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [78.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //