Array 1 250847-251973 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNNR01000002.1 Klebsiella grimontii strain 170096690-17 170096690-17_scaffold_0002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 250847 29 100.0 32 ............................. CTAAGGTTCAGCTCTGCAAACAGGCATTCATC 250908 29 100.0 32 ............................. GCGCTGCCGGTCAGGTAGTTGCTCTTTCCAAT 250969 29 100.0 32 ............................. GTCCAGACTACGACCAGTTGATGAAGAGTAGC 251030 29 100.0 32 ............................. CTAGCAATACGAAAGGTGGAAACCTTTTGCGC 251091 29 100.0 32 ............................. CGCCAGAAAACGATTGAGGCGATACAGGCTCA 251152 29 100.0 32 ............................. CGGTAACATGTTATCACCGCCGATGATTAAAG 251213 29 100.0 32 ............................. AACCTTAGCCATGATATAAAATTGGTCTTCAT 251274 29 100.0 32 ............................. TAAGTTGTCAGTTGCTCAGGCTGACGAGGTAA 251335 29 100.0 32 ............................. CGTACCCGGTTTATCAGGCGTGCTGGGCTTAC 251396 29 100.0 32 ............................. GTGTCTCCATCCATAAGAACGAAGTGAGTGAC 251457 29 100.0 32 ............................. CAACCTGGACGCTGCAATGGATATTCACGCTG 251518 29 100.0 32 ............................. TTCTTTTGAGCAATACTACCTGAACCGTAAGG 251579 29 96.6 32 .G........................... GGATATTCCTTACGTGCTTCCTCAGGTCACAA 251640 29 100.0 32 ............................. GTGATATCCCTTACCCAGGCTTCAAAAAGTTG 251701 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 251762 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 251823 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 251884 29 96.6 32 .............T............... AACAGCCCACAAAACTTTTTGCATGGGGCCGC 251945 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================ ================== 19 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTCTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCCTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 211097-212528 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNNR01000007.1 Klebsiella grimontii strain 170096690-17 170096690-17_scaffold_0007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 211097 29 100.0 32 ............................. ATAACGACCTCAGGATCATAAAGTCCGGTTGC 211158 29 100.0 32 ............................. CAATGTCTCTCATGGCGCAGCTGAACGCCTAC 211219 29 100.0 32 ............................. CCCCATTAGGAGGTTAACGCTTGAGGTTACGG 211280 29 100.0 32 ............................. AAAGTAAAATCGACGTCGCTGGTCATTGTGCT 211341 29 100.0 32 ............................. ATACCGCAGGCGATGAAAGACGTTATAAACGC 211402 29 100.0 32 ............................. TCTGCAGAACGGGCTGACGACCGCGAACCAGA 211463 29 100.0 32 ............................. CCTGTTGGAATTCAGCCAGACGTTGAGCTGCT 211524 29 100.0 32 ............................. GCATGTACCACATGCTCTTGCCACATTTAGAT 211585 29 100.0 32 ............................. CTGTCTTCTGCATCAGGTGACAGGCGACTGCT 211646 29 100.0 32 ............................. GTCTGGACGGCTACTACTGGCACCAGAATACA 211707 29 100.0 32 ............................. GGTAGGTGAGAACAGGGTCGGGGAATCCATGA 211768 29 100.0 32 ............................. CCCGATAAATTCACTCTGTGTCATACGGTGAT 211829 29 100.0 32 ............................. TTCCTGGTCTGGTTCTTCGGCGGAATCTTCAG 211890 29 100.0 32 ............................. CCACTTGGCCTACGCCTTTAATCATACAAACT 211951 29 100.0 32 ............................. GTTACGAGTACATGTACGGTGGCAATGATGAC 212012 29 100.0 32 ............................. GCATTTCGTTTGCATCTAATGAATCGAATCTG 212073 29 100.0 32 ............................. CTGTATGTCACGATTTCCTTCACACCACCGCC 212134 29 100.0 32 ............................. GGGGCGGGATGATTCAGGACGCATTTATAAGG 212195 29 93.1 32 ...........G.T............... GCGAACGTTGTCGGGAATCTGGGCGGGCTGTG 212256 29 89.7 32 .T.........G.T............... AGGCGGCTATCCTGCCCGACAAGATGAAGCTG 212317 29 89.7 32 .T.........G.T............... CCTGCGGCGCGACGCAGTATCGGGATCGATAT 212378 29 89.7 32 .T.........G.T............... GGTTAGGCGCTGAGTTTAACGCCGTTGCTGAA 212439 29 89.7 32 .T.........G.T............... CTCCCGCTGGACGCTTCGACATGTCTGCGAAT 212500 29 79.3 0 .T...G.....GT........G.T..... | ========== ====== ====== ====== ============================= ================================ ================== 24 29 97.1 32 GAGTTCCCCGCACCAGCGGGGATAAACCG # Left flank : GTACTTGCTGCAGGTGAAATCCAGCCGCCGTTACCGCCTGAAGATTCGCAACCTGTTGCTATCCCACTTCCTGTCTCTTTGGGGGACTTTGGGCATCGGAGTAGCTAGCGATGAGTATGTTGGTTGTTGTGACTGAAAATGTGCCTCCGCGGCTACGAGGGCGGCTGGCTGTCTGGTTGTTGGAAATCCGAGCGGGTGTTTATGTTGGTGATGTTTCCGCAAGAATCCGTGAAATGATATGGCAGCAGATTTCTGTTCTTGCTGAGGAAGGGAATGTCGTAATGGCATGGGCGACTAATTCTGAATCAGGATTCGAATTTCAAACCTTTGGGGAAAACCGACGTATTCCGGTAGATGTGGATGGGTTGAGATTGGTTTCTTTTCTTCCTTTTGAAAATCAGTAGGTTACACGTTCTTTAATAAGGTGGATTTGTTACTAATAGGTTGGTACATTGTTGGCCGTTGAAAAATGTAATAGAAAACAGATATATATGTTTAGA # Right flank : GGTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCTATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCACCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //