Array 1 5096-3208 **** Predicted by CRISPRDetect 2.4 *** >NZ_QDKN01000013.1 Halomonas venusta strain YYYZ-3 NODE_13_length_79693_cov_49.4815, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5095 28 100.0 32 ............................ AAAACGCGGTGCTGGAAGCGCTGACCGCTGGA 5035 28 100.0 32 ............................ GCAGAGAGTGAGGGAAGCCGTAAATAGGCTAG 4975 28 100.0 32 ............................ CTGGACAATCCCCAGCGCATACGCTTTGCGGA 4915 28 100.0 32 ............................ GCTAAAGGCGACACGGTAACGGTAACGGATAA 4855 28 100.0 32 ............................ ATCATGGCCACGCATCGAGGACAAAGGGGCTG 4795 28 100.0 32 ............................ AGGCCAAGGTCGCCCGAGAAACTATACGCCCA 4735 28 100.0 32 ............................ ATATCGGCAGCGGGCACCACCACTTAGTCCGT 4675 28 100.0 32 ............................ TGGACAATTCAGACGAGGACGACAGCGACCAG 4615 28 96.4 32 .......................G.... AAAGAGGAGTTCACCGCCCTACGGCGCAAAGT 4555 28 100.0 32 ............................ ATACTGGAGAAGTCATCGAGGTTCGTAATAGG 4495 28 100.0 32 ............................ TAACCGCGTTGCTTTATTTGAGCGCAGGCGGT 4435 28 100.0 32 ............................ AGCCCTACACGCAACGCAAATGCTCGCAGTGC 4375 28 100.0 32 ............................ ATTTGGAAATGCAGCGCACCCGTAACCGTATC 4315 28 100.0 32 ............................ TATATGGAAATAACCAGGGCCGGTCATGTGCA 4255 28 100.0 32 ............................ GTGAGCGGCACCACACAGGATAAGCCCGCCCG 4195 28 100.0 32 ............................ AGAGGATGCGCGAAGCCTGGTCAGAGCGCCAT 4135 28 100.0 32 ............................ TGTACAGAAATTCACGGTTGCGGTACCGATGC 4075 28 100.0 32 ............................ AGCAACGGCAGCGCGGGCAGCTCGCGCTCTCC 4015 28 100.0 32 ............................ TAATTTCATTAACTTAGTAACCACTTGGAAAG 3955 28 100.0 32 ............................ ACTGCCTCGCGGCGGTGGGGGCTTTTTCGCGT 3895 28 100.0 32 ............................ ACGGCGCGCGTGAGTTTGGCATAGAGCAAGAC 3835 28 100.0 32 ............................ TGGGCAAAACACTGCAGCCATTCCGGCGTGTT 3775 28 100.0 32 ............................ AACAGCTCACGGGTTTCGGGGTTTGGCATCAC 3715 28 100.0 32 ............................ AGCCCACGCGCCTCAACCGTTCCACCGGCCAT 3655 28 100.0 32 ............................ CGCGCACGCTGCCAGGCATTGGCCTCTTGCTC 3595 28 100.0 32 ............................ TGGGAAACTGATTGACGTAGCCCGTTCGCTCT 3535 28 100.0 32 ............................ GTCCCGCTGGGCAGGACGACCAGGATAGGGCA 3475 28 100.0 32 ............................ ATAAAGGTTCGACACCGATCGCCAATCTCTTC 3415 28 100.0 32 ............................ TTGCTTTCCAATAGTCGAAATACCCATTAACG 3355 28 100.0 32 ............................ AGTGGCGCGTCGCAATAGGCATGTCAGGCGGG 3295 28 100.0 32 ............................ TACAGAGATGCGCGATATGACGATGTCCGCCC 3235 28 82.1 0 ................T.A...C.C..T | ========== ====== ====== ====== ============================ ================================ ================== 32 28 99.3 32 CTTCACCGCCGAGCAGGCGGCTTAGAAA # Left flank : CGCTAATCGACAACATTCGAGAGGCAAAAGCACTGAGGGAGCAGGCAGTCATTCATTACCCTCGTGCAGTACCGGAGGGATACTCTGGCGCCTGGAGCATCTATCAACGATTTCGCATTCCTGCACGCCGATCAGAGCGCATACCCGGCCGTTCAGTGCGACTCAAGCGCGTTCAGGAAGCCAATGCGAACGAGCTCCCTTTCTTTCAAATGAAAAGCGAGAGCAATGGAGGCCGCTTTCGGCTTTACTGGGAAAAACTCTCCTATACAGGCACAACACCTTCGAATGATGAATCAGTACCCGACTCTTGGGGGTTATCAACAACGACAAAACCAGTACCGCTACCAGACCTTAGTTAGTACGACTCTTGACCCTTTTTTAAAGACCTCTAACGCTTTCATAAGAAACAACAACTTAGAGCACCACCTAAAAAAAGGGTCTTTTGCTCTTTAAAACTTCAGATGATTGATAGTCTTTGATAATTTGGGTATGTATCTCTA # Right flank : AAAAAACAAAATTAAATCAGCGCTCTACTTCTAGTGCCACCGATTACGCAGCGTGTGGTAGGGCTACGGTGAGCCCGCGAATGCAGCGCGTAGCGCTGCTTAGATACTCGGCAGCAGCGACTGGTTATGCACTATTCGTAGTGGCTCCAAAGCCGGAGCACTTTAATTACCCCTTCGTCTTCAAGCACTTGGTAAACCAAACGATGTTGAATATTGATGCGCCGTGAATAAGCCCCCGCAAGATCACCGATGAGCTTCTCAAACGGAGGCGGTTTCCGATACGGATCTTCTGCGATTAGTGCCAGCAGCTCCTGCGCCTTTGGCTTCAAGCCACTGGTGGCTAATTTCTTCGCATCTTTCTGAGCGTGTTTGGTGTAAACCAGCTTCCATGTCACCAGTCCAACTCCTCATCGCACTCATCTACAGGGGTCTCCATTCCCTCACGAACAGACTCTCGCATCCCTGGCACAGAAAGCAGGAAAAGCGTCTCCTGAATGGCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCGCCGAGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //