Array 1 293-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOWA01000002.1 Haloarcula argentinensis strain pws5 Scaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 292 30 100.0 36 .............................. TCTACTTCGCCGTCTGGTGTGGCGTAATAGGTTATC 226 30 100.0 36 .............................. TACACGGCTAAAGGACTCGGGTCCTACTCAGTCCTT 160 30 100.0 34 .............................. GCGCGGACTGGTAAAGGTCCGTTTTGACCTGCTG 96 30 100.0 36 .............................. GATCTAGCCATCTCGCGCCAGATCAGGAACAGCAGG 30 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 100.0 36 GTTTCAGACGGACCCTTGTGGGGTTGAAGC # Left flank : GTGCTTCACCGCGTGCGCGTCGTCGACGATACGACGCGTTATGCCTGCCCGCCGGCACGCTCGGCACGAAGCGTGGAGCCCTGTACAAAGGCCACGTATCGGCCGAGATAGCGGTCGCACATCATACCGATCCCCGGGGAGAACACCAGCATTGAGAGCTGGGGCTGCACGGATAGTACGACACGAACAGCGGTTGGCCCTCCCGAGGATACGGGAACTTGTGGCTGGAAATCACATACCGCGAGGCCGCCTTGCGCGGACGGACGGAACTCCCGAGACGCACGAGCGGGTACCCCGCCGTATACAGAGGGTGGCTCTCCGGCCGCCCGCGAAAACGGAAAAAGAGACATCACACTCATTACGCATACTGTCGAATTGCAGGAACCTCGCATCACGCCTATTTCATCGACCCCCCGGGGGTGCAGGGGGTATTGACGGTCGACGAAAGTACCGCTGTGGAAGCGTCCCAGAGAGTGGCTGTACTGCCCAGATCCGGCATG # Right flank : C # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.30,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 1152140-1151650 **** Predicted by CRISPRDetect 2.4 *** >NZ_WOWA01000004.1 Haloarcula argentinensis strain pws5 Scaffold_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1152139 30 100.0 35 .............................. TCCAGCGACATCCAGAAGTGGGGCAGTGAGAACGA 1152074 30 100.0 35 .............................. ACCAGCAGAACACCGGCGGTTATGACTGTGGCCTT 1152009 30 100.0 35 .............................. AGTCTACCGAGTCTTACTCCACCGAGGAGATTCGG 1151944 30 100.0 36 .............................. GGTTGGTCCCTGACGCCCCCGGACTTCTGGCTGCAG 1151878 30 100.0 36 .............................. ATTATCTGTGCCGGTGGGATTAGCATGGTTGACGGT 1151812 30 100.0 36 .............................. GACCGAACGGAGACACTCATCGAAATCCAACCGGGG 1151746 30 86.7 36 ............T......T..A.....A. TTGCACCACCCTGCGAGTGTTCCCAGAGGTGGTCTG C [1151730] 1151679 30 76.7 0 .GC......A...GG.....AA........ | ========== ====== ====== ====== ============================== ==================================== ================== 8 30 95.4 36 GTTTCAGACGGACCCTTGTGGGGTTGAAGC # Left flank : | # Right flank : TGTCACGTCTACCGTTTACTCCGGAAACGGTGGTGTGTCTCTCGCTGCTGACCACCAATCACAGCCAGCGAGTCGGCACATTGGTTAGACGCTCGCGATGCTCCCAGCCCAGACACCAAGCGCTGCGCCGGCGATCCCCAGTCCCAGCAGCGCGTAGTTCGCGAGCGGGTTCTCCGCCCTGACGACGTCGAGGGAGTAGTACGTATCGTCGACGGGACGCCACGGACGGACGCCGGCTGGGGTCAATGCGTCTGTGGCGATGTGTGACGTGCTGGTTCCAACCGCGACGACGGACTCTGTCACAGCCGGCACGACAGGTCTGGCGATGGCAGTTTCTGCTGCAGGCGGCATTATGATTACACCAGTTAGCAACGCTACGCCGTGCACTCGCTCTGGAACATATCAACTGTCGCCATCGATTTGTAATCCCTATATCCGACATCTGAAATACCTATACTAATACCTACATTTACAGTCTGAAAGCTGGCTCGAGTGTCTAT # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGGACCCTTGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.30,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //