Array 1 220605-219722 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGPJ010000003.1 Klebsiella grimontii strain 4928STDY7071477, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 220604 29 100.0 32 ............................. GTTACACGCAGGTTTCAGGCTCTGGCCTGAAT 220543 29 100.0 32 ............................. GCGCAGAAATAATGATAACTGGATTAATATTC 220482 29 100.0 32 ............................. GGGTATCCCATGCCTTTAGACTCTGAAGCCGC 220421 29 100.0 32 ............................. TTCGCCATATTCACAACGCCCGCGCCACCGGT 220360 29 100.0 32 ............................. ATACTTGATCGGTTTTGCCGTATTTTTTTGTT 220299 29 100.0 32 ............................. CATCACTGATAGCTTTCGGGATTTTGTTGATC 220238 29 100.0 32 ............................. TACGCCTTCTTGTTCGTCAGCGGGTCGACGTA 220177 29 100.0 32 ............................. TTTTTGGCTTGAAAATGCTTTTTGTGGATAAC 220116 29 100.0 32 ............................. CTGCTGGGCGTGGCCTGCGCTGTAAATACGTT 220055 29 100.0 32 ............................. GTTAATCATGCGGTTCGCCAGCTTATCAGTGA 219994 29 100.0 32 ............................. TGTTCGATATCACCGACGAGGTAGACATAGCG 219933 29 100.0 32 ............................. CTTATCTTGAGCAACCGCGCAACCGCCTTGGC 219872 29 100.0 32 ............................. TTTCTCCGCCCATAGGTACAGGGTTTGCGTAC 219811 29 100.0 32 ............................. CCTAAAACTGGCGTCACAACAATAAACACCGG 219750 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 100.0 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGATGCTGGTGAGATTGAGCCGCCTCAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTAATATTCTATTAAATTTAATCAGTTAGGTAGTGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 61281-60519 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGPJ010000006.1 Klebsiella grimontii strain 4928STDY7071477, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 61280 29 100.0 32 ............................. CGATCGAAAAAGAGGCTCGCAGCCTGGTGCCG 61219 29 100.0 32 ............................. CTTGGCGATCTTGTTCGTGAGGTATTCGGAAG 61158 29 100.0 32 ............................. ATTGACCAGGCTTCCGCTGACCGACTGTTGAA 61097 29 100.0 32 ............................. GCACTGACACACGAGGAGCTTTGCCAGTTAGC 61036 29 100.0 32 ............................. ACTCCCTTCTTGCCTGCTTCCACTGCTCTGAT 60975 29 100.0 32 ............................. TTATCTCAGGATATGAGTAGAACAGCAAAAAA 60914 29 100.0 32 ............................. GTTTGTTTCTGTCTCTTCGCGCATTCCTTAAG 60853 29 100.0 32 ............................. AACGGGCGCAGATATCCATAGGTCCACGTAGC 60792 29 96.6 32 .........A................... TTACTGGAGATCTGATGCACTTGCGTTCAAAT 60731 29 100.0 32 ............................. AAGATCAACCCGCGGATGAACACATTGATGCC 60670 29 100.0 33 ............................. GCCAGTGAACAGCCTGGCGCTGTGGCTGAATAA 60608 29 100.0 32 ............................. GCGGTGAACTCAGTTGCAAGTGGGCAGGGTGA 60547 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 13 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCAAACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACCCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //