Array 1 83028-82208 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_RXMG01000006.1 Klebsiella pneumoniae strain 18059 18059-contig_6, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     83027	    29	  93.1	    32	............TG...............	AAAAGACAAGCCAGTTTTATTGTCGCTCTTCT	
     82966	    29	  93.1	    32	............TG...............	AGCAACGTTTCCGGATTATATGGCTGGAACGT	
     82905	    29	  93.1	    32	............TG...............	TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA	
     82844	    29	 100.0	    32	.............................	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
     82783	    29	  96.6	    32	............................C	CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG	
     82722	    29	  93.1	    32	............TG...............	TTACTTTTTGGCAGTTGGTAAAACACTTTTGC	
     82661	    29	 100.0	    32	.............................	CGAAAACGGCAACCTTCATAAAAACGTCTTTT	
     82600	    29	  93.1	    32	............TG...............	CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG	
     82539	    29	 100.0	    32	.............................	CAGCGTCTGAACGGACGAAACATCCCTGTTGA	
     82478	    28	  89.7	    32	.....-......TC...............	CGAGCGCTCTCCTGGTAAATCGGTAGCTCGGA	
     82418	    29	 100.0	    32	.............................	GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT	
     82357	    29	  89.7	    32	............TGA..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
     82296	    29	 100.0	    32	.............................	CACTACCAGATCCGAATGGACACCCGTAATGA	
     82235	    28	  93.1	     0	.......................-....A	|                               	
==========	======	======	======	=============================	================================	==================
        14	    29	  95.3	    32	GTATTCCCCCCGCATGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCAAATCTTGCAGGTTGCAATCAGCAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCAATAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGGTTATATATACAGTGTTTTTAAGTGATCGGAGGTTGTGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAACGATTATTGCATCAGGCATCC

# Questionable array : NO	 Score: 5.58
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGCATGCGGGGGTTATCGG
# Alternate repeat :   GTATTCCCCCCGTGTGCGGGGGTTATCGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [12-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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