Array 1 2342217-2336692 **** Predicted by CRISPRDetect 2.4 *** >NC_015520.1 Mahella australiensis 50-1 BON, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================== ================== 2342216 30 100.0 35 .............................. AATAAAATTCATCTTCGGTAAAGACAAGCAGGCAT 2342151 30 100.0 37 .............................. GTTCCATTTCCAGATGCTTCCGCATCAGTAGTATTTC 2342084 30 100.0 37 .............................. TTGAACAAGATAAAGCCAATATTGACAGATGTGATGG 2342017 30 100.0 37 .............................. TGCTACTTTTGATGATAGCGACACATCGGCGGGGAAA 2341950 30 100.0 37 .............................. TTTTCATTTAACCACTGAACTACTTGTTCTGCCTCTG 2341883 30 100.0 37 .............................. AGAAAAAGACAGAAAAAGCAGAATACGACGGAGTTAG 2341816 30 100.0 35 .............................. CGCCTGTACTGTTCATTTTTATTTTACTCCATTGC 2341751 30 100.0 36 .............................. TCAAATTGGAGTATAACATCGTCAGTACCGTTAATA 2341685 30 100.0 36 .............................. CTTGTTGGGCAGACTGGCAGCGGTAAGACTTATGCA 2341619 30 100.0 35 .............................. CGACAATAATGCTTGGGCTGGCTTTACGATATGGG 2341554 30 100.0 38 .............................. ATGGCTATGATGAATGATAAGTTAAAACAAAGTATTCC 2341486 30 100.0 37 .............................. ACAGATGCGAATGGCGTGGTTCAAGTCCAAGTAGTTC 2341419 30 100.0 37 .............................. TTGGATGAAAATTTATCTCATACTGAAATATCAGTGG 2341352 30 100.0 37 .............................. AAATGTTCAAAGAAGAACCCAAAACCAGAATGGATTT 2341285 30 100.0 37 .............................. CTGGTGAAGGGTATAAAAGAATCCAGCCAAGTTGGAG 2341218 30 100.0 38 .............................. ATGTCCAATAAAAGTTGACCTATTTCTTTTTCATTTCC 2341150 30 100.0 38 .............................. AATACATCATTAAGATTATGACTCAATGTTCCAAGTTC 2341082 30 100.0 37 .............................. TTTACTATATTGAATTATTTGAAATGAGGTGATATAA 2341015 30 100.0 37 .............................. ATGGACATAGCACTGCGTGCTATACGCAACAAAGCCA 2340948 30 100.0 37 .............................. AATTCATTGGATTGATACACATATTCCCAATCCAAGA 2340881 30 100.0 37 .............................. CAGATGCTTGGAATGGTATCAAAGAAACCTTGTCCAC 2340814 30 100.0 38 .............................. TTGGACAGATACATGATTCAATAGTAATGGATGTTTTA 2340746 30 100.0 38 .............................. ATAGACAGACTTACCAAACAGCAAAATATGTTGGATAA 2340678 30 100.0 37 .............................. ATCGAAAATCAAGTGCTCCCGAAATCCCAGCATACCC 2340611 30 100.0 37 .............................. ATTATATGTATGGAATAGCTTATGATGGAACAAATAT 2340544 30 100.0 36 .............................. GAGTATCATTTAGCTGAACAAGTATCACTGGCCATG 2340478 30 100.0 37 .............................. ATAGTCCACCATTAAACCCATTCGTTTGGCCAATTTG 2340411 30 100.0 37 .............................. AATTTACAAATCATAATGATTAGTGATGAAAGAGTGG 2340344 30 100.0 36 .............................. TTTTAACAGCAAACCTTCCATGCTCATCTCCTATGG 2340278 30 100.0 37 .............................. CGCAATACTACAAAATCTGCTTTTTTGACATCTGCTC 2340211 30 100.0 36 .............................. TAATAATAATAGAAAGAGAAATAAAAAATACATTGA 2340145 30 100.0 38 .............................. AATCGCCCGACCGAATGAATACATCAGCCATTTCCTCA 2340077 30 100.0 37 .............................. CGAGGCAATACGTTCATTATCTTTCTGCTGTAAATTT 2340010 30 100.0 36 .............................. AGAGTTCTGTAGAGTTTTCTAATATAGCTGCTACTG 2339944 30 100.0 36 .............................. TCGCCGATGTCTAGTAAATATCGATTCGGCTGCTCT 2339878 30 100.0 37 .............................. CGAGGTTTGGATTAGATTGTTAAGTTCTCGGCTTATT 2339811 30 100.0 37 .............................. TTGTGCTCCTTATTGTGGCAATCATAACATAGTAATT 2339744 30 100.0 37 .............................. TTCGAGCGATGGTTAAAATTAAGCGTTACGGATAGAA 2339677 30 100.0 36 .............................. GCTCTTGCATAACAGATAAGCCGTGCTTTGCCATAA 2339611 30 100.0 36 .............................. GCTCTTGCATAACAGATAAGCCGTGCTTTGCCATAA 2339545 30 100.0 37 .............................. TAAGGCAAATTTCGGATACGACAATCCAGATGCTGAC 2339478 30 100.0 36 .............................. CATAAAGAATAGCAGGCACACTTCCAAGCGCGCTTG 2339412 30 100.0 36 .............................. CACAATACACATCTTTGTTATTACCTTTTAACGGGC 2339346 30 100.0 36 .............................. TATAACGCCTCTCTTTCTTCGGCTTTTGCTATGCAA 2339280 30 100.0 38 .............................. TTGAGATGCCAAAGAATATATGACCCATATATGGGATT 2339212 30 100.0 36 .............................. AAGCCATCATTACGAAATCTATATGTAGTCATACCA 2339146 30 100.0 37 .............................. TATTCTCCGCGGCCACACCTGTAGTACACACGCCCGC 2339079 30 100.0 37 .............................. ATCAATACATGGAACAAAATAAAAGAAGTTGGCGAAA 2339012 30 100.0 38 .............................. CGGCTTTTACCGCTTCATATGCCTGTTTGCCGCTCTCA 2338944 30 100.0 37 .............................. GCGGCTTTGGCTTCTAGAACTGGTTTCACATATTCAA 2338877 30 100.0 37 .............................. AAATAGCGCAAAACTAACTTCGCAAGATATTACATGG 2338810 30 100.0 36 .............................. AATGGTGCTATTATAGCATCCTTGACCTTATTGAAT 2338744 30 100.0 36 .............................. GCCAATCCAATCACTTGGATAGTAGCAGCGATTTTA 2338678 30 100.0 38 .............................. GATAATTCGTATGTTAATACTTCCATTCCAATACCTCA 2338610 30 100.0 36 .............................. TCGACTTCGCATTATCTATGTTATACGTAATCGTCG 2338544 30 100.0 37 .............................. ATAGGCTTTCTGCGATTAGATTTAGAGCAGGCGATAA 2338477 30 100.0 36 .............................. AAAATAAGCATTACAACTGGAGCTGGGAAACCAAAG 2338411 30 100.0 37 .............................. ATCGAAAGTGCCATATGGGATAAGCCGCCATTATACT 2338344 30 100.0 37 .............................. CGCGTCTTTACTGCTCTTATAGCCGGAATACCATTTT 2338277 30 100.0 37 .............................. CTCCACATGCGCCATTCTTGTAGCACATTAGCTATGG 2338210 30 100.0 37 .............................. TCATTGCCCTCTCTTTCTATTCTCCTTGCATATATCC 2338143 30 100.0 39 .............................. GGCGCTAATTTTGGTTTGCAGTATACTTCCAGCCATTCA 2338074 30 100.0 56 .............................. GAAATTGGGAAATTGAAACAGAATACTAATACTAACGTATTAGTAAACTCTAATTT 2337988 30 100.0 36 .............................. TGAGTATCCATTGTAATTCATTTACAGACAAATCTG 2337922 30 100.0 36 .............................. GCACAATAAACTTTGTGGGGTCTGTAAATTCACCAG 2337856 30 100.0 36 .............................. TAAAAAATGGTGGAACTAATCCAATAACAGTTACTG 2337790 30 100.0 37 .............................. ATTTGACTATACCAAATAATATAAATATACAATTGGG 2337723 30 100.0 37 .............................. TGTAATTGGAGACAATAAAATAAAGTTCCAAGGTGAC 2337656 30 100.0 36 .............................. AGGAATACGACAAAAGCGTAACAGCATGGTTAGCTA 2337590 30 100.0 36 .............................. GATGCTACTTCACCCGAAAATGAAGATATGTATCCA 2337524 30 100.0 37 .............................. TTCCCGATGACAGCGTGAGGGATGACCAGGGCAGAAT 2337457 30 100.0 37 .............................. AAATGATAAACCCAACTCCCATTCTTGATGGATTTTT 2337390 30 100.0 41 .............................. AATGATGCTGAAACATTTTCATTTTCAATGCCATATGATGA 2337319 30 100.0 35 .............................. GCGTGGTTTCCTTTCTTGCGTGAAACTAGATTCAA 2337254 30 100.0 36 .............................. ATAATATAGAAAATTCTATAGATAACGCTATTAATG 2337188 30 100.0 37 .............................. GCGGCAAAGGTGATAAAATATCCAAAATATTACCATT 2337121 30 100.0 37 .............................. GTCGAGAAAGGGCGCGATAGTGGCACAGGAGTATTCA 2337054 30 100.0 35 .............................. AAATAGCGTTTCATGATGATGTTGCGCAGGCAAAG 2336989 30 100.0 37 .............................. GCGGCAAAGGTGATAAAATATCCAAAATATTACCATT 2336922 30 100.0 37 .............................. GTCGAGAAAGGGCGCGATAGTGGCACAGGAGTATTCA 2336855 30 100.0 37 .............................. AAGTTATGGAAGGTAATTTAAGGCGCAAAAAGTTTAT 2336788 30 100.0 37 .............................. AATATAAAAAAACAGGGAGGTACTATGACGGATAACA 2336721 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================================== ================== 83 30 100.0 37 GTTTTTAGCCTACCTATGAGGAATTGAAAC # Left flank : AGACGATGAAGCCAGGGACATTTGGGAGGCCTACTCAGAAAATGTTTTGGCGCAAAATGATGAGGCTAAAAGAAGAGAAGCGCGTTTGAGATTCAAGGGCAAACTGGATGCCTATATAATATCAGTACCTGATAAATTGGCTATGGGATTACAGCCCAATATGGCAGTATCCAAAGATAAGACATTCTGGAGGTTACCGTTAGAAGGCTTGGATCTATTCTATGATATTGAAACAGGTTTCAAACGCTCACTGGATATGGAGGTTTGGATGGCATAAATTTATGCCGAAAAATAGTTGTGCAGCATAGGGCGAATTATGATATAATGATGTCGTCGATCGGTAATAACGTAAAAAATGCTGGAGATCGACGACATCATTATTATGGCTTATAAAAGGCTTAATGTAGCTATTCGCAGTGATGGGCCACGTAAGTTAGAGCAGCGATTTTGTAATGCTGTAAATAAGATGTAAATGCCCATTTTAAGCTGCTAAAATTGGG # Right flank : CTAATAGATATCAATAAAAACAGTTTGTTTATAGACAAGAATAGCTCTACCGTATTTAACGTAGAGTGCTTAGGCAAATATTTTGCGGACTGATATAGGATATATTTGCAAGACCAGCAATTGCTAAGGCTGAAGGATTATAAGCCTTTATATACTTGCAAAACTATTATAGACCAGCTAATTGTTGTCAAGATATTTTGCAAAATAATTTTAGCAAGGTGGTTCTAAAAAAGGGTATAACAAACAAACCAACCAAAAAAGCTAAAAATTAGCAGGCTGGTCGGCTGTTCTTTGAAAACTAAATATCGAGCATGTTTGTACTAAACTGCCAGCTTCTTTGCTATAAGCAATTTTGCATGTTCTTCCGGGTTTCTTAACCCAAACGGCTTTCTATCCCTAAGAACGGCAAAAATGATATTGACAAGTTTATGCATAACGGCGCCAAGAGCTACTTTTTTAGGCTTGCTCTTGCATTTTTCGTGGTAATACTTATAAAGCAC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 2671961-2671465 **** Predicted by CRISPRDetect 2.4 *** >NC_015520.1 Mahella australiensis 50-1 BON, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ========================================== ================== 2671960 27 100.0 40 ........................... CTGTTGCTACCTGCATTGAGAACACCTCCTTATGCCGGTG 2671893 27 100.0 42 ........................... TCGTAGCCACTCCAACAACGCCTTCTTGGGCACTCGCACGTG 2671824 27 100.0 41 ........................... GGAGATGGATGAAGATGAATACTTATAGGCCGATGTTGGTG 2671756 27 92.6 40 ............A...A.......... CTTTACCCATCATTTGCTTCCTACTTAGGACGACTAGATA 2671689 27 88.9 38 ..A....T....A.............. TATTTGACGAATTAGGTGCCTATATATCTCCGCTGTTA 2671624 27 88.9 39 ............A...A.....G.... ATGAATGGGAAAGTAAATTGCTGTGTGATGCGCCGAGTG 2671558 27 88.9 40 ..A.........A.A............ TTCACTATAAATGAAAATTTCAGGCAGCGCTCGGATTGTA 2671491 27 92.6 0 ............A.............A | ========== ====== ====== ====== =========================== ========================================== ================== 8 27 94.0 40 CAGATACCTTCTGTGAGGGGTTAAAAG # Left flank : ATGCAGGCTATGCCCATAGGGACTGTCCTGATAAGCCGCATAGTGCTGAATGAACCGACAGCGTCACCATTAACAGAATCGTGTTATTATGCCTTTCTCAGCACCTTGTTAGATGATGGCTTTTTAGGCGCTGCATTTGCAAAAGGATGCGGCGAATTTGATGCAATGGTTCTTGTCAACGGAACAAAAACTGAGAAAGACGAAATAAGGGAACGAGGCCTGCCTTTTTGGGAAAGCATACAAAGCAACAAAGAAAAGATAGAACAAACACTGCTGGGGCTGGACAACATTTTACAAAATGAACCCAGTGATACCAAAAAGAACAAACAGAACAAAAAGAACAACGGTACGGGAGACGATGCATTAACGGAGTCATCTACTTCTCAATAAACAGAAGATGTCGTCGATATACCGGCAAAAATACGTTATTGGACATCGACGACAAAAAAGAGTAATATAGGCTGTCAACTGTGCATGAGACAGGCATTTGTTAACGGGTG # Right flank : CCATACTGAAGACATACATAATCCTTCCACGCATTGCGTATAGATATCCTGTCACAGGTGAATTACCCGCAGCTTAGTAGAAAGCCCCGCCGGTTGTAGCGGGGAGAAGTCGGCAGCGATAAGGAGGAATAAAAAAGATAAATGTTATATAAAAACTATATTGTAACGGTATATCTTGATATACCGATTGCGATACCGGCCAACAAAAACGAGATATTCCCGATCCATTTCGACGGACTGCTTACCAGAATAATGGCGGAAGAAGCCAGGTCTTTTGATTACAGCAGACTAACAGCGGAAGACATAGAACTACCGCTGGAGAAATGGGGAAAAACCAAAATGATATATAAAGCGTCATCCATGATGATAAAACCACCTGCCAAAGTATACAGAGAACCATGGATGGGAACACAGACATGGCTGGACTACGGTCGCGTATTATTTCCCGACAGTTTTAACAAACAGATAAGGAACGGCCAAGGGGTATATAAATCATCTGC # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGATACCTTCTGTGAGGGGTTAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //