Array 1 1671480-1664603 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP024094.1 Jeongeupia sp. HS-3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1671479 29 100.0 32 ............................. TCGTAGCGCAGCGCATCGGACAATTCGCACGC 1671418 29 100.0 32 ............................. TCGCAGGCCGATACCATCAACGCCGAATTTGG 1671357 29 100.0 32 ............................. CTCGCGCTGACCGCCTGGCCGACCGGCAACCC 1671296 29 100.0 32 ............................. GCTGTTGCGGAGCTGATTGGACAGATCAACCT 1671235 29 100.0 32 ............................. CGTTCCTCTGCGGGGCCAATGCTGTGGTAGGA 1671174 29 100.0 32 ............................. ACCAATAGCCTGCCGGCGTTCGGTGGTATCGA 1671113 29 96.6 33 ............................T TAGCCGCCGCTAAGTCAACAAGCCCCGCCCAGT 1671051 29 100.0 32 ............................. GTCTACAGCGGCACCAATAAGGCCGTGTACAA 1670990 29 100.0 32 ............................. TCAGCCTGCTCTCGCTCGAGAGCCTGCACGCC 1670929 29 100.0 32 ............................. GCGCTTGACGATATTCGTCATGGCGACATTGC 1670868 29 100.0 33 ............................. GACTCGACCAGCGGCACGCCCAAGACGCTGGCC 1670806 29 100.0 32 ............................. ACAAAAGCACCACCTGCCGACGATGCAAATGC 1670745 29 100.0 32 ............................. GTCTACCTGCTCTGCGAGGGCTGCGGTGGTCA 1670684 29 100.0 32 ............................. AAAAGGTCGTGCGCCTTGGCGACAAGCAAATC 1670623 29 100.0 32 ............................. AAATCGACTTGAACAAATCGGTCGAAATTGTC 1670562 29 100.0 32 ............................. GCTTGCTCGCCCATGTCGGTGCCTGGCTGTCG 1670501 29 100.0 32 ............................. GGCAGCGTGCTGTCCGCTGACGATGTGCAGTC 1670440 29 100.0 32 ............................. TTGCAGGCTTTACCATTGTGAAGACCAATAAC 1670379 29 100.0 32 ............................. TGAACAAGTATTTGTACATGAACAGCGACGAG 1670318 29 100.0 33 ............................. GTTTGCATAGCCGCTGCAAAGGGCATTTGCAGA 1670256 29 100.0 32 ............................. TTGACTGATATCAACCATCCGATATGTGTGAG 1670195 29 100.0 32 ............................. GTGCTGACGCTCACTGCGCGTGGCGTGCAGCA 1670134 29 100.0 32 ............................. TCGCATTTCAGGTAATGCGCTGGCCGCGACCA 1670073 29 100.0 32 ............................. ATCAATATCGGCTTTTGCATCAGGCTTTGCCA 1670012 29 100.0 32 ............................. ATTTCGCATGAGCATATGCAGTTCTTTCGGAT 1669951 29 100.0 32 ............................. GATACGAAGATGCTCACATCCTTTGCTATGGC 1669890 29 100.0 32 ............................. CTATCGAGTGGCTCGACAAACCGGATTACAAC 1669829 29 100.0 32 ............................. TGCCGCTCGCGCTGGGCGTCGCTGCCTGGGGC 1669768 29 100.0 32 ............................. ATCCGCGACACCGTCGTTGCCGATGCGTCGCG 1669707 29 100.0 32 ............................. TCACCGGATAGGGCTGTTAGAAGGGCCGCATC 1669646 29 100.0 32 ............................. CTAGATTCCCGCAGTTTGAAGAGTGGGAGACT 1669585 29 100.0 32 ............................. TCATGGGAAGCCGCCGCCATGATGTTTGATGA 1669524 29 100.0 32 ............................. AAACCGCACGCGACCTGCTGAGGTGTCCTGAA 1669463 29 100.0 32 ............................. CGGGAGGCATGCAGCTTCCGCTGTTGGCTTTG 1669402 29 100.0 32 ............................. GCAACTAACCTAGTACGTTCTGATCGGCCCCA 1669341 29 100.0 33 ............................. CACTTCATTCAATTTATTGCGCAAACCGTCAAT 1669279 29 100.0 32 ............................. TTAGGATCATACTGGTAACGAATGCCGTTTTC 1669218 29 100.0 32 ............................. GAAAATCGTTTGCTATTCCGAAAACAGGACAC 1669157 29 100.0 32 ............................. GCTGAGGCATACGGTTTACTCGAATCCGCGCT 1669096 29 100.0 32 ............................. TCGGTGAGCTGGATCGCCGTTGCGTACTGGCC 1669035 29 100.0 32 ............................. GTCAATGAACGCGTACGGGTCAGCTTCGGTTA 1668974 29 100.0 33 ............................. GTTAGCGCCAGCAAAGTTAGCGCCAGCAAAGTT 1668912 29 100.0 32 ............................. TTATCAACGTGCAATGCACACCAGAAGCGACA 1668851 29 100.0 32 ............................. CGCGGCGCACGTTCGAGCTGCTGCCACACCTG 1668790 29 100.0 32 ............................. GCGACCCGGTCGGCCTTGCCGAAGAGCGCACC 1668729 29 100.0 32 ............................. GCTTCGGCGCGGGTCTGCGCCGGGCTGGTCTC 1668668 29 100.0 32 ............................. CGTCGATCCGGGCATTGCTGGCCTCGACGTCG 1668607 29 100.0 32 ............................. CCGTTGAGGCGTTGCGCTTGCGCCTCGAGGAG 1668546 29 100.0 32 ............................. CAGGCAGGTACCGCGAACGCACGCCCAATCAA 1668485 29 100.0 32 ............................. GCCAGCCCCTTCCGCTTCCGCGCCTATGAGGG 1668424 29 100.0 33 ............................. ACCGCACGCGCCGGCCGCGCCCGGCGGTGGTGC 1668362 29 100.0 32 ............................. GCGCCGGCGCTGCCGGTGGTGGAGGTGCAAAT 1668301 29 100.0 32 ............................. GCGAATGGGGCAAGTATGGCGAACGTGTTGAC 1668240 29 100.0 32 ............................. TCGCATTTCAGGTAATGCGCTGGCCGCGACCA 1668179 29 100.0 32 ............................. GTTGAGCTCGAACGCCAGCGCGTTCGGGCTGT 1668118 29 100.0 33 ............................. GGTGTTCATGCTGGTCTCCGATAGGTCTTGGTC 1668056 29 100.0 32 ............................. TCCACCGGGGCCGGTCGGTACCAGATCCTGCA 1667995 29 100.0 33 ............................. GGAGAAGGTATCCAGCAGTCTGCGTTTCAATTC 1667933 29 100.0 32 ............................. GGGCTGACCGTCGCCGACCTGATCAGACGATA 1667872 29 100.0 32 ............................. GTACCCAGCGCGCGCATCGGCGGCAGCAGCCT 1667811 29 100.0 32 ............................. ACGTAGTTATTCGGGATGGAGCCGAACTGCGA 1667750 29 100.0 32 ............................. CGCCGGGCACCGTGCCGCAGCGTTCCGGTACT 1667689 29 100.0 32 ............................. ACTTTTTGCAACTTCTTCGATTCCAACTTGCG 1667628 29 100.0 32 ............................. ATGCGCGGCCTGTCTTCTTTGACGAAATCGCG 1667567 29 100.0 33 ............................. TGAACCCACATTGACGCTTGATACCGCGCCGTA 1667505 29 100.0 33 ............................. GTACAGCGTTACGTCGGTTCCTTCTTGCGGGGC 1667443 29 100.0 32 ............................. GTTCGACGTATTGCGCGTCGCTTATTACTTCG 1667382 29 100.0 32 ............................. TGTCGCAGCTAAAACCCGCGTCGCAACTTGCC 1667321 29 100.0 32 ............................. TTGTCGGCGAACTTCCGCGATTCCGCTTTGGA 1667260 29 100.0 33 ............................. CAGATCAATGAATTTCAGTCACCGACGGAGTTC 1667198 29 100.0 32 ............................. CGGTTGAACCCGCACATCACGCCGCAGCTGCG 1667137 29 100.0 32 ............................. GCTTTCCCAGGGCTGAGTCGCGGTGTCGTCAA 1667076 29 100.0 32 ............................. CGCTGGGCGGCGCAGGTTCGCCCGGACGTGAT 1667015 29 100.0 32 ............................. CACCTGTACGGCCCATCGGTCGACCAGGTATT 1666954 29 100.0 32 ............................. TCACGTTTTGTCCTTGGTCATGCGGCCATCGG 1666893 29 100.0 32 ............................. CTCTTGTTACGCCGCATTCGCCGGCATTGAGA 1666832 29 100.0 32 ............................. GCGCTGCTGGACGCGGAAACCTGGCTGACCGC 1666771 29 100.0 32 ............................. TCGGCCGGAATGGATGACGAAGAGGCGCGCAC 1666710 29 100.0 33 ............................. CCATTTACTTGGTCCTTGCCATATCGGTCTGCA 1666648 29 100.0 32 ............................. ATCACCGATGCCAAGCGCAAATCCGAGGATGC 1666587 29 100.0 32 ............................. GCTCGCCACCGCTCGCCATACAGCGCAGCGAA 1666526 29 100.0 32 ............................. CTGCGGATCTGACCCAAAGCGGCTGGTACTGG 1666465 29 100.0 32 ............................. GATTTTCTCGGGCTGTCGGCCTACGAACGGAT 1666404 29 100.0 32 ............................. ACACTAGCCGATACGCCGCGCGAGCGGATGAA 1666343 29 100.0 32 ............................. GTCAGTTGGCCATCAAGACCGCCCGCGGTGCC 1666282 29 100.0 32 ............................. GCGCCGATGAGGCGTGCCATCACCGCCGTCCC 1666221 29 100.0 32 ............................. TCACCCAGCTTCAGGCGGTCTATCGCGAAACA 1666160 29 100.0 32 ............................. CATTCGAGTCGCTGTTGAATACCGCCAAGACC 1666099 29 100.0 32 ............................. ACGCTCAAGGGCACGTTTGCCGAGCTCAACGC 1666038 29 100.0 32 ............................. ACCATCGCCAGGCGGATCACCGAAATCACTCG 1665977 29 100.0 33 ............................. AACCCTGAAATCGTCACCCTCACTGTCGGTCAA 1665915 29 100.0 32 ............................. CCGCTACCGGCTGGTCGACGACGGCAACGGCG 1665854 29 100.0 33 ............................. CAGATCGTTGAGCGAATGCTCGTGCTGGCCGTA 1665792 29 100.0 33 ............................. CACGCCCGATCATCGACGGCGCCGAGTCCTTTG 1665730 29 100.0 32 ............................. TCAGCAGGACGAAGACGCCGTCGAGGCGTTCT 1665669 29 100.0 33 ............................. TACTGGAGCCACGCGAAGCCGGGCGAGTACTGC 1665607 29 100.0 32 ............................. TCCTGGAGCCACGCGTGGCCGGGCGAGTACTG 1665546 29 100.0 32 ............................. CGCGGCGCACGCTCGAGCTGCTGCCACACCTG 1665485 29 100.0 32 ............................. CCGTATCGGCTTGCTGCTGCTGGGGTTTGGCG 1665424 29 100.0 32 ............................. CCGTTCAATGGTACCAACAAGGCCGTCTACAA 1665363 29 100.0 32 ............................. GTGTTCGATCCGCTGCAGTGCGGTGTTGAAGC 1665302 29 96.6 32 ..............T.............. GTCGGCACGTACAGCACGTCGATGGTTTTCAT 1665241 29 96.6 32 ..............T.............. CTTGGTCAATCTCACCTCCCGATACGACTGGC 1665180 29 96.6 32 ..............T.............. TAATAGCCGGTCTTGATACCAGTGCCGGATAA 1665119 29 96.6 32 ..............T.............. GCGATCGTACTGACGACCACCGAGACCGTCCC 1665058 29 96.6 32 ..............T.............. TGCAGATCACCGGCCGGCTGTCGTTCACCCGC 1664997 29 96.6 32 ..............T.............. ATGACGATCAGCCGATCGTCAGGCTCTACCAG 1664936 29 96.6 32 ..............T.............. TCCTTGCCGTGCATCGAATCGCGCCGGATCAG 1664875 29 96.6 32 ..............T.............. GGCTTCGATTTCGCGGGCCCGCTCACCCCGCC 1664814 29 96.6 32 ..............T.............. ATCAGCAAGGTGCCCAGCGCGCGCATCGGCGG 1664753 29 96.6 32 ..............T.............. ATTGTCCCGATCCGTCGAGCGTACATCGTGCT 1664692 29 96.6 32 ..............T.............. GTCATCCGCTATTTGGGCTGGTGCGCAATCAT 1664631 29 96.6 0 ..............T.............. | ========== ====== ====== ====== ============================= ================================= ================== 113 29 99.6 32 CCGTTCCCCGCGACCGCGGGGATGAACCG # Left flank : ATATTGAAGTCATCCTCGCCGCTGGTGGCCTGGCGCGCCCAGAGCCGGCCGAAGAAGCGGTTCTGCCGGCGATCCCGAATGCGGAGGGCATTGGCGATGTTGGTCATCGTGCTTGAAAGCGCGCCACCACGACTGCGTGGGCGGCTAGCGGTGTGGTTGTTGGAAATCCGCGCCGGTGTTTATGTCGGTAATTACTCGAAAAAGGTTCGTGAACACATCTGGAGCCAAGTTGAGGCGGGGATCGAAGAAGGCAACGCCGTGATGGCTTGGCGAACCAGCAATGAGGCGGGCTTCGATTTCATCACCTTGGGTACCAACCGGCGTATTCCACTGGAACTCGACGGTGCCAAACTGGTGTCGTTCTTGCCGCTGGAGGTGGCGAAGTAGTCGTGCTGATGGTGGCGTTCTTTAACAAAAGAAGAAGCTGTAAGGCATCCTGAAAGTTTGGTAGAATTTCTGGGTGTGAAATAGCCTATATGGTTCAAAGAGTTATTTTTAGT # Right flank : CAGCTTAGGTGGTGTCGTCACAAGATGCGCGCCCAGATCGCAATGCAGCGAATCTGGACTGCCGCCAGGAATGACGCCGCATTCTTGGCATAGCGCGTGGCGATGCCTCGCCAGCGTTTGAGCTGCAAAAACGCATTTTCAACCAGATGCCGGTGGCGATACAGCGCCGCATCGTGTTCACGCGGCGCCTTACGGTTGCGGTGCGACGGAATCACCGTTCTCATGCCTTGCGCCGAGGCCTGAGCAACGATGGCGTCGCTGTCATAGCCACGATCAGCCAGCAGGTATTCCGCGCTCAAGCCGTCAATCAACGCGCCGCCCTGGGTGCAGTCCGCCGTCGTGCCCGAGGTCACCAAGACCCGCACCGGCATGCCGTGCGCGTCCACCGCCAAGTGCAGCTTACTGTTTAGCCCCCTTTGGTCACCCCCATTGCCTGATTGCCGCCGCGTGCGCCGGCGGCATGCGGATGCACCTTGGCATGCGTGGCGTCGATCATCAGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCGACCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCGCCCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //