Array 1 170606-174663 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYDP01000006.1 Flavobacterium sp. GSP27 NODE_6_length_201391_cov_117.438439, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 170606 36 100.0 30 .................................... TGTGCATTTAGCAGGGCCCGAAACCATCAC 170672 36 100.0 30 .................................... ATAGTGGATAGTAATACTGGCTGTCCATAT 170738 36 100.0 30 .................................... CAGAGATACTTAATTTAATCTAAAATTTAA 170804 36 100.0 30 .................................... TATACCGCCTTATAATGAAATTACGATTAC 170870 36 100.0 29 .................................... GTATTGACCACAATAAAAGCATTGGAATA 170935 36 100.0 30 .................................... GTTTTCTAATGATTGTAAGAAAAGAGATAA 171001 36 100.0 30 .................................... ATAAGCAATTAGCAAAAGATACTGGATTAG 171067 36 100.0 30 .................................... CGGGCACGCTTCATTGTCAGTGTAGTTAAC 171133 36 100.0 29 .................................... GTAAACACGCTGGCTGTACACCAATGCCC 171198 36 100.0 30 .................................... GAACGTGTAGCGTTTGAGCGAGACAATAAG 171264 36 100.0 30 .................................... TGTTATATTTGATCCTGCCGGAAAAGTATA 171330 36 100.0 30 .................................... GCTTGTCCGTACGAAATGGAACTGATAAGT 171396 36 100.0 30 .................................... TAGTTTAGGAATTACCGTAACGGGTTTTGA 171462 36 100.0 30 .................................... AGGACAACCATTGGGTATTTTAAACAATAC 171528 36 100.0 30 .................................... GAATTAGAATATCAATATAAAAATGTATTG 171594 36 100.0 30 .................................... ATTACATATATGTAATATATCCTATTTTAA 171660 36 100.0 31 .................................... TCTTTTGATAATGCAAAATTTGAAGAAGAAG 171727 36 100.0 31 .................................... TACTTTGTAAAAAGCGCAAACCTCACTCTGA 171794 36 100.0 31 .................................... TATATAAATTTGATTCTTCCAGCGGACCTTC 171861 36 100.0 29 .................................... GCATTCTTTTTCATGTTGAATAGAATCTA 171926 36 100.0 29 .................................... TTGAGAAATCCGAAGACGTCACGCCTCAG 171991 36 100.0 29 .................................... ATTTATCAATCCAAATACCTGTTATAATA 172056 36 100.0 30 .................................... AGTGCAAACGATGCTATTAATGAAAAGGCA 172122 36 100.0 30 .................................... ATATTGCTCTCGCCTTGTGTTGCATTAGCG 172188 36 100.0 30 .................................... AGATTCAGATTAAAAACCGTATCACTGATA 172254 36 100.0 30 .................................... CAAAGAGTTGTTGAAGAAGCCAACGAATTA 172320 36 100.0 31 .................................... TCGCAACCGCAACCGATTCACTTTATTTAGG 172387 36 100.0 30 .................................... CATAAATTATATGTCGATAATGAACCACTT 172453 36 100.0 30 .................................... TTTACAGTTGATAAGGCTCGTAAAGTAATG 172519 36 100.0 30 .................................... TGAACTAACAGAACTATACATGAAAGAGGT 172585 36 100.0 29 .................................... TGTTCACCACCGCCGTTAACGGAATTCGG 172650 36 100.0 30 .................................... GGAAATCAATCCGGAAACTTTTGGACTAGA 172716 36 100.0 30 .................................... AAATTAAAAAAAGAACAAAGAGAATTAAGT 172782 36 100.0 30 .................................... TTTTCGTGTAAATCCCATTCTACTTGCGCT 172848 36 100.0 30 .................................... GTTGAGAAATCCGAAGACGTAACGCCTCAG 172914 36 100.0 31 .................................... TTGAAGTTTTTTGCGAAGGTGTAGATTTAAA 172981 36 100.0 29 .................................... TTATGATATTAGGAATAACGCTAAAGCAC 173046 36 100.0 30 .................................... CTAATCTTTTTCTACTTACCAACTGGCCGT 173112 36 100.0 30 .................................... TCTTTGTTTGTTTTTTATATTAGCGGCATT 173178 36 100.0 30 .................................... ATTTAGAATCTTTGTGTGCAAAGGAATACT 173244 36 100.0 30 .................................... AAAGGCATTGCATCAAATATTGATACGACG 173310 36 100.0 30 .................................... AGTGTTTGTTTTGACTTTTAACATCTCGGC 173376 36 100.0 30 .................................... GAACGCTAAACAAGTCCGAGCCCCGCTAGG 173442 36 100.0 30 .................................... CTTAACCAATGCGGTTGTTAATTACGAATG 173508 36 100.0 30 .................................... TGTAAAGATGCTAATGATTATTTAATTAAG 173574 36 100.0 29 .................................... TTGTAATATTGAATTTAAAAGACCTAGTA 173639 36 100.0 30 .................................... TTAGGTATTGAAGTAGTGAACCAACGTGAT 173705 36 100.0 30 .................................... TTTACAGTTGATAAGGCTCGTAAAGTAATG 173771 36 100.0 30 .................................... GCAAAAAAAACATTATAACTAATCCTTATA 173837 36 100.0 30 .................................... TGAAATGTTGTTGATTGAAAATCTAAATAT 173903 36 100.0 30 .................................... TTCGTATCTGTGATAAATTCTTTCCATGTA 173969 36 100.0 29 .................................... TTTAAATCAGAGCCTGTTGACTGTGTATT 174034 36 100.0 30 .................................... TCTACAAACACATTCACTTAAGAAAAGTAA 174100 36 100.0 30 .................................... TTATCAATATTGCACAGAGGACGAAGAGGG 174166 36 100.0 30 .................................... GGATTGATAAATATAAACAATTTCAAAAAG 174232 36 100.0 30 .................................... TGCAGAAAAAAGAAGTAAAGACATTGATCG 174298 36 100.0 30 .................................... AGATACCTGCTCAGAGTTTATGAAGCGGTA 174364 36 100.0 30 .................................... ACTAAGCCAATTTGATTTAGCAGACCATAA 174430 36 100.0 30 .................................... AGAACAAAACGTTTACGAAGCGTCTTTAGA 174496 36 100.0 30 .................................... ATCGGCTGCCCTATCAGCTTCGGAAGTAAC 174562 36 100.0 30 .................................... CTTCCTGTTTTCATCATCGTGGCCGTGAGC 174628 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 62 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TATTTAATCAAGCAAGCTCGTGATCGAGATGAGTATGTTGAATTTGTTCGAATGAAGTTAGATAGAGCTGAAAAAAGCGGATTTAGCACCAAAACAAAAGAGGAATTATTAGCAGAAATTAAGAAAAAACTAAATGTTTAGTTATAAACTTAATATACAAGCAGGGAAGATTTGACTCGAATTTTTGAATATGGAATTGGTCGTTTCGGATTTCTTCAAGTTAATAAATATTATGAAATGTTTTTTGATTGCTTTTCAAAAATCGGATCAAATCCATATCTATTTCCTGAAGCTATTCGTTTTCGTCAAGGTTATAGATATTGTATTTGTGGAGTGGATACTATTTTTATAAAATTAATGCCAATGAAATAGAAATAATGGCAATTATAGGAAGACAAGATTTTTAAAGGTTCTTTGACATACAGTTTTTCATTGTCTTAAACAGCCAAACCACAACTGAAAGGTATGGCATCCGCCCAGCAGGGATGCAGTAGCTTTCA # Right flank : TAGTTGGCTTGTTACCTTCTAATTATCAAAGGAATATGGGTGAATGTCGTATAAAAAAATGCCTCTTTTTTGGATTGATATCCCAATATTGAGGCATTTTTTTATTTCTATCAATAAAAATTCGATAAATGGTAGTAGAATCATAGTAAGAGGCAAGATTCAATGATTAATTTTTAGTGCAATCTGCAGGGACAGGTCGCGACCTGTCCGTACGTTAGAGATTAGTCGCAAAATAATTTATATTTTTTACGATTTGTGCGCAAGATAGGAAATGTTGTTTAGGGAATGTGAATAGGGCAGGAATAGGGCAGGGACAGGTCGCGACCTGTCCGTACGTTAGAGATTAGTCGCGAAATAATTTATATTTTTTTACGATTTGTGTGTAGGATAGGAAATGTTGTTTAGGGCAGGAATAGGGCAGGGACAGGTCGCGACCTGTCCGTACGTTAGAGATTATTCGCAAAATAATTTATATTTCGTTACGATTTGTGTGCAAGATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //