Array 1 510635-513162 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUBG01000001.1 Klebsiella pneumoniae strain 196I3 contig_0001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 510635 29 100.0 32 ............................. TTAACCATTCTCCCCGGCTCAGTACCTGCCCG 510696 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 510757 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 510818 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 510879 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 510941 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 511002 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 511063 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 511124 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 511185 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 511246 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 511307 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 511368 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 511429 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 511490 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 511551 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 511612 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 511673 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 511734 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 511795 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 511856 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 511917 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 511978 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 512039 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 512100 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 512161 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 512222 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 512283 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 512344 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 512405 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 512466 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 512527 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 512588 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 512649 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 512710 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 512771 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 512832 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 512893 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 512954 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 513015 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 513076 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 513134 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACTGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //