Array 1 2641466-2638386 **** Predicted by CRISPRDetect 2.4 *** >NC_010814.1 Geobacter lovleyi SZ, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2641465 29 100.0 32 ............................. GCGAACTCAACGCACGATTGCAAGCGGCAGAG 2641404 29 100.0 32 ............................. TTGATGGCAGACCGGAAAGCGAGGCAATCGAA 2641343 29 100.0 32 ............................. GGTGTGCATCCAATACACACCCCAGGCGGAAA 2641282 29 100.0 32 ............................. TCGCCAGCAGTCATTGACTGCGAGGAGACAAC 2641221 29 100.0 32 ............................. GTCTAATCCTCTATGGCTTTACACTACTACCG 2641160 29 100.0 32 ............................. GCACATGCTCAACTGAGCGAAGAAACGAAAGC 2641099 29 100.0 32 ............................. TGCTTACCGGCCCTGGTCGTGAGTTTAGGGAA 2641038 29 100.0 32 ............................. CCTTATTGGACACATGGGCAAAATACTCAATC 2640977 29 100.0 32 ............................. GCTCATTATAATACCGTAGTAGTTAATCACAT 2640916 29 100.0 32 ............................. TACGTGGAAAGCGGATCGAACCACGCCACGGG 2640855 29 100.0 32 ............................. ACATTCACGGCGAACACGGGATCATCAGGGAG 2640794 29 100.0 32 ............................. AAACAATAAAGGCCGGTTTATTAAAAACTCAA 2640733 29 100.0 32 ............................. AAAGCCCTGTCCGTCAACAGGGCAATCAATAC 2640672 29 100.0 32 ............................. CCCTCTGGTGTGGTCGTTACGTCGATACCGTT 2640611 29 100.0 32 ............................. AACTTCAAAGCAAAAGGAGCATATACCATGAT 2640550 29 100.0 32 ............................. GTCGAAACTGGCCTTTGCGTCAGTCTCGCCGC 2640489 29 100.0 32 ............................. CCCCATGACGTGCAGTACGTCCGACTGTTGCA 2640428 29 100.0 32 ............................. GCCGCTGACATTGCCGGACGGTTTGCCGACAG 2640367 29 100.0 32 ............................. ACCGGCATCGGAAATCCGACCACGGACGAAAA 2640306 29 100.0 32 ............................. CCCCGGCAGGGAGGAAGGAGGGGCCCCACCGG 2640245 29 100.0 32 ............................. CCTTGTCTCTATCATGTCTTTCTTCTCCTTTA 2640184 29 100.0 32 ............................. AGCTTTGTCACTGGAGAGTGGATCCGGATCAA 2640123 29 100.0 32 ............................. CGACATACCGATCTGGCGCAGTATTGCGGTTA 2640062 29 100.0 32 ............................. AAACACCAGCGGCAAGAGTCGGAGCGCAGACC 2640001 29 100.0 32 ............................. CGATTGTAGACGTTGCCCCAGTCACTGTTGGG 2639940 29 96.6 32 ............................T ACGTCCGGCAGCATGGAAAAAGGCTATGGGCC 2639879 29 100.0 32 ............................. TTACCGGTGTGCGGCTCCCGCCTGATCTGCTG 2639818 29 100.0 32 ............................. GGACAAAGTAAATGCGTGCGAAAAATAGAGGA 2639757 29 100.0 32 ............................. GTTCCGAACATTTCTTTTATTACATCCAGCTT 2639696 29 100.0 32 ............................. TCTGCAAAATCAAAATAATATTTTGCTACATA 2639635 29 100.0 32 ............................. AAGATATCACGGTGACTTTTTCCAACGCTACC 2639574 29 100.0 32 ............................. AAACCACCTTTGCAACAGATCCCGCCAGCCCG 2639513 29 100.0 32 ............................. GCTGAATTTACCGACCTTGCAGCCGTTGTACT 2639452 29 100.0 32 ............................. CGGGTCAAGCGGCTACGCTCCGGATCCGGCGC 2639391 29 100.0 32 ............................. ATATAGCACCCTAACGAGGATTAGACGTCAAA 2639330 29 100.0 32 ............................. CAGCTGGCCGAGGCCACCGGTAATGCTGTTGC 2639269 29 96.6 32 ....................T........ TTTTCCCGTTTATCGGGACCATGCCAGTTGAT 2639208 29 100.0 32 ............................. AGGCGACACAAACATTGCTGCCGCCTCTGGAG 2639147 29 100.0 32 ............................. GTATGACCGCACGTTTTTGTATTCGAAAATCA 2639086 29 96.6 32 ..............A.............. CCGTAGTTTTTGGCCAGGTGCCAGCAGGTGAT 2639025 29 100.0 33 ............................. CAGCCGAAAGCGCAATAAGCACCAGCACCGAAC 2638963 29 100.0 32 ............................. CCCTGATCGAGCAAATGGCTTTTGACGGCAAA 2638902 29 96.6 32 ............................A ACAAAAGGAGAATAACATGAGAGCGATGATAC 2638841 29 100.0 32 ............................. AATGGTTGGCTTTCAAGGGTCATTACTGGGAG 2638780 29 100.0 32 ............................. ACCATTCGGCTCTATGCAAACATCAACATTGT 2638719 29 100.0 32 ............................. ACCTGGCCAACAAACTTTCAGCAGAACGTGGC 2638658 29 100.0 32 ............................. TTTGAGCTGAAACGCGACACCTTCCAGAGCAA 2638597 29 100.0 32 ............................. GACAAGAACCCCAAAACATGGTCAGAGTTCTG 2638536 29 100.0 32 ............................. ATCCTTCCTCTTTCTTCCTCTGCCTATGCCCG 2638475 29 100.0 32 ............................. GCGGGGACTCGCTTTTGTTAAGGACGGCGTTT 2638414 29 96.6 0 .......A..................... | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.7 32 CCGTTCCCCGCACCCGCGGGGATGAACCG # Left flank : AAGCCCCGCGAAGGCTGGGATCAGTCCTTTGCTGCCATGCATGCCACCGGAGATGATGCGCTGCTGATTGACGAAATGCTTGATCAGGAGGACTGGGAGTGGAGCTGAAACAATACCATGTGTATCTGGTGAATCTTGACCCAACCATTGGACATGAAATTCAAAAGACACGGCCCTGTCTGATTATCTCTCCTGATGAGATGAACCGGCATCTGCAAACGGTTATGATTGCCCCCATGACCACCAAATCCCATAACTACCCAAGCCGTGTATCGCTTGCCTTTACCGGTAAACAAGCATGGATTGTGCTTGACCAGATTCGCACGGTGGACCGTAGGCGGCTGGTGAAAGAACTGGGTAAGATAACCACCCAGCAGGCTCAGAACGTAAAAGCTGTGCTCAAAGAAATGTTGGTTGATTAACGGCAATTTTAGTGCCTAAAAGTTGGTAACATTTTGGTCTTTGAAAATTGCTCGTGATTTCATATAACTGCAACAAGT # Right flank : CAGGTTCCCTTGTACGCCCCTCCTTGCCGGGCGCCAAGCTGTCATGGCCCTTTTCAATGCCGGAGACAGGGCTTTGGTTGTCCAAGAGTTGTCCTTTGTGATACATAATCAGCATGCTGTTTTTATTGAAAATAGGTGCCGGCTTGCTGGTTGCGTGTAACGCTGCGCTTGTTCTCGCTTTTCTCGGCGCCGGCTGGGCTCTGTCTGCTTTTGCCGGCGTTGTGTTTGGCCTGTACGCAACTACCCGGCTTTAGTCTGTTGCCTCCGGCAGACATGAGCGGCAGCAACTTGCGGGAGATTGACGCTAAACAGGTTCTTGCTAGCTTTGTATGTAGAAGCCAGTCCATTTTCTGAGGTCATACCTATGTTGAACAAGCAGCTTCTGATCAACCGGCCCCGCTTGATGCTGATCATCCTGGTCTGTATCTCCAGCCTGATTTACCTGGTTGATTATATGGTGGATGGCAGTCTGAAGGAGGTTACGACCAGTTTTCTCGGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //