Array 1 547874-549232 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018196.1 Fusobacterium necrophorum subsp. funduliforme strain F1291 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 547874 30 100.0 37 .............................. CTGGATTATAGATTTAACAGGATGATGGATGGAAAAA 547941 30 100.0 34 .............................. GCAGGAAGAATTCATCATATGATAGTCCATCAAC 548005 30 100.0 38 .............................. TTCCTTCGTGTCCGATGTTTGTATTTCGTCTTGAAGTT 548073 30 100.0 36 .............................. TGATTTTTTGCTTGCAATCTAAAAAAATATTGTATA 548139 30 100.0 37 .............................. GTCAAAAGAGAGAATAAGAAAGAAAAGAAGAAGCTAT 548206 30 100.0 37 .............................. AACTTTGAAACGGTTTTGAGTTCAATTTCTGAAAAAG 548273 30 100.0 35 .............................. AATGTAAAAAAAGATTTTTACAAGCACGAGTATAG 548338 30 100.0 37 .............................. TTTTCCCTCCTAGATGTTTCTTTTCATTTTTTCAAAA 548405 30 100.0 36 .............................. TTGCATCTGTCGAGGCGGCTAGAATTATGAAGCGTT 548471 30 100.0 35 .............................. TCACATTCACAGTCGCTTGATTGACTGCTGTGGGC 548536 30 100.0 36 .............................. TTTTTTCCCTCTCTTGCAGCCATTCTTTGATTAGAA 548602 30 100.0 35 .............................. TCACATTCACAGTCGCTTGATTGACTGCTGTGGGC 548667 30 100.0 36 .............................. TTTTTTCCCTCTCTTGCAGCCATTCTTTGATTAGAA 548733 30 100.0 38 .............................. TCAATTTTTTCTTGATGGTTAGAGCAATACTTATAACC 548801 30 100.0 37 .............................. TTTTCCCTCCTAGATGTTTCTTTTCATTTTTTCAAAA 548868 30 100.0 38 .............................. AACGTCCAAAGGCTTTCAAGCGTAGGACTTCTAAACAA 548936 30 100.0 37 .............................. GAAGCAAGGAGACATACATAGACAAAGAAAAATATTT 549003 30 100.0 36 .............................. TTTAAACTTCCAAACTTCTCTCCCTCATTTAACAAA 549069 30 96.7 36 ...............A.............. TTTAACATCCCAATACTTCTTCCGCCGTCTTGTAGA 549135 30 96.7 37 ........................A..... TTTCTTACTATCTGGAAACATGCTATTTTTTCAACAA 549202 30 73.3 0 ..C........TT....A.TT...TA.... | T [549224] ========== ====== ====== ====== ============================== ====================================== ================== 21 30 98.4 36 ATTAGAGTATTACTAGAGTAGAATGTAAAT # Left flank : TTCCAAATGTGGTGGTGATAAAATATGTATGTAGTAGTTGTATATGATATCTCTTTAGATGAGAAAGGGACTTATCATTGGAAAAAAATTTTTCAAATTTGCAAACGATATTTGCATCATATTCAAAACTCTGTGTTTGAAGGAGAACTATCGGAAGTGGATATTGAGAGATTAAAATATGAAGTATCTAATTATATTAGAGATAATCTAGATTCTTTTATTATTTTTAAATCTCGGAATGAGAGATGGATGGAAAAAGAAATGTTAGGAATACAAGAAGACAAAACAGATAATTTTCTGTAGATATTTTCATTGTCGACCTCTCATAAGGTAAAAATCTCAGGACATTGACAAAAGAATAAAAGAACTTGATTTTCCAAGAAAAAAAGTAAAGATAGAAAAATAAAAAAGGGTTTTCTCTTAATTTTTTTTATAAAATAACTTTATCGACAATTATAGTCAAAAAAAGTTATAGATAGCAATGTATTTTAAAGTCTCGT # Right flank : TTTGAACTATAACTAAAAAAGAGGTAAAAATGTTATGTTGGATTAAAAATTTGCAATATATGGGTTCATTATTGAAGATTGTTTGAGAGTTTCTTTTGAATTAAAAAAAGGGAGCTTTCATTGTAAGAGAATACGTAAGGATATGGTACACATAATCAGGTTACTGGAACTTCGTCCGACGACATCACCGTGATGTTGACAACTTTAGATTCCTTAAAACAAAGTGAAAGAGAAATTAATATGGAAGATATGAAAAAAAGATTTAGTAATTGTACAAATGACGAGATTGACAAGAGTTCAGAAATTACACATGTTCACTCTATTTCAAAAGAAGCTTGCAGAATTTATGTGGAAATAGTGAAAAGTCTGATTATAAATAAAAATTTAAAAGACATCTTAGAGAATTTGGAATGTACAAAAAATTTTCAAGATTAAAACATCTCGATACTTTGTAGGAAGAGCAATATATTATGAACGCTTTAGGAGGTAGTTTGTGATGT # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAGTATTACTAGAGTAGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 892277-893098 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018196.1 Fusobacterium necrophorum subsp. funduliforme strain F1291 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 892277 30 100.0 37 .............................. CCTTGTAAGATTGGTTTTATACTCATAAGAAAAGCGA 892344 30 100.0 37 .............................. GCAGACCAAGCAACTGAAAAAATTGGTTTTTTTACAG 892411 30 100.0 36 .............................. ATTTCTTCTGATAATTCTTTCATAACATCAATTTTT 892477 30 100.0 35 .............................. GCAACTCCTCTAACATCGCCCCTAATTTCACACGA 892542 30 100.0 35 .............................. GAAAAATGGCTTATTTGCAATATAGAAGCATATTT 892607 30 100.0 37 .............................. TATGGAATAACAGTGATCCGTTTTTAATTAATGATAC 892674 30 100.0 37 .............................. GCAGACCAAGCAACTGAAAAAATTGGTTTTTTTACAG 892741 30 100.0 36 .............................. ATTTCTTCTGATAATTCTTTCATAACATCAATTTTT 892807 30 100.0 36 .............................. AACTCAGGAAATCAACGTCAGGAACTAAACGGAAAA 892873 30 100.0 35 .............................. GCAACTCCTCTAACATCGCCCCTAATTTCACACGA 892938 30 100.0 35 .............................. GAAAAATGGCTTATTTGCAATATAGAAGCATATTT 893003 30 100.0 37 .............................. TTTTATAGTTTACATAACTATTATCTAAGTCACTAAA 893070 29 93.3 0 .......................-.....T | ========== ====== ====== ====== ============================== ===================================== ================== 13 30 99.5 36 GACTAAATCCAAGTAGATTGGAATTTTAAC # Left flank : AAAAATTTAGATACTGTGAAGAAAAATTATTGAATCTTTCTTTTTATAATCATCAAGATAAAAAGAAAGAGGAAAGTATAAGAGTATTTCTTATAAGAGATAAAAATAGTGATAATTTTAAATTTGAATCAATATTAGACGATGGCAGTAATAAGATATTTATTTCTAAAAATGGAAAAGAAATTACAATACAATGTTGTGATAAAGTATTAGAAACTTTAATAATAGAAAAAAATACTTTAAAGATAAGTTCAAATGGAAAAATTATTTCTTTAATTCCTCATTATTCTTACTCTATTGATGTAAAGTATTAAAAAAATTTTTTGTCGACCTTTCATAGTGTAAAATTTATGCTAGGTCGACAAGAGTATAAAAGCATAATATTATGCTTTTTTCTATAATTGAAGTTGTATTTGAGGCATTATTTTGATATAATTTTATTCATATAGACAATAAGGCTATTATAAATATTTCAAAATATTAGAGTAATAGTAACACTA # Right flank : TATTGTTAATAAAAATCTTTAGAAAATAACTTTAAATAATAGATTTTTTTTATTCAAAACTTGAAATAAGATTTACATAAAAGCTTAAAAAGGGAGATTCCATTCTCTCTTTTTTCATAATTTCTTTCTTTTTTATATAAAGTTTGCTATACTGAAGGTGAAAACTCGTGAAAGGAAAGAAAGCATGGAAAAAGAAAAAATCAAGGAAATGTTGGAAGAACGCTTTCAAGTAATTCCTGCATACCCTAGAAAACGACATATTCTTTTTTGGTATGATGGACAGAAAGCATTTCAAGATATTATAGAGGAATTACAGCTTGATAAAGTAAAAATCCTTCGTTTGCAAAAAGGAGTCAATCGAAATGGAGAAGAAATTGATACCAATCTTTTTAAAATAAAATATACTTTGGAGATTTTGGATACGGATTCTCATTATTTAATTTATAGTGCTAATCCAAGACCCTCTAAGCATGAAAATTATCTCTTAGATATAGAAAGCT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACTAAATCCAAGTAGATTGGAATTTTAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.50,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-88.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //