Array 1 125765-125950 **** Predicted by CRISPRDetect 2.4 *** >NZ_AEJD01000006.1 Gardnerella vaginalis 101 GV101_c00006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ============================= ================== 125765 25 100.0 28 ......................... CTGCGGCGTTTGTGGTCGGTTTGGCTGG 125818 25 100.0 29 ......................... TCTCTGGCGTTTGTTGTCGGTTTTACGGA 125872 25 96.0 28 ...G..................... CTACGGCGTTTGTTGTCGTTTCTGCATT 125925 25 80.0 0 GG...ACC................. | A [125944] ========== ====== ====== ====== ========================= ============================= ================== 4 25 94.0 29 TTTTGGAAACATTTGCCGTGTTTTT # Left flank : AATTAATGCGATTGACGAGCGTTCTGCGACGCGTTGCGCGGGTGCGTTACTTAAGCGCGGTGTGAAGAATGTGTTTGTGAATGCTGGTCGCGCGGGCGTGGCTTACGGCGTGGCAGATGAGGGAGTGGCGTTTTACCCTGTGCCTGTAAAGCGCGTGCAGCGAATGATGCTTGCGCACGGTAATGGAAACGTTGGTGTTGAGGCTGTTGGAAACGACAACGGTTCTAGCGATGTTGCTACGGCGGCGTTGATTTATGCGCGATACAACGAGTTTGATCCAGCTAAAACTGGTCGTTTTGCTGTTGCTGCGGCCGCGCTTAATACGGAGTCGGTGCAGCCGGTGCATGAGTCGCTTACGCCGGAGCTGATTGCGACTCGCATGGTTAATATTCACGAGCGCGCGTAGCGCGATGACTTGCTTTCTGCGCGAGTGTCTCATTTTGCCCATTTTGAGACACTGGTGCAGATGAGTTACTGCGTTATTGTCTCTGTTTGGTTGT # Right flank : TTCCGGCGTTTGTTGTTGTTTTGGTCGGAATTTTGCGCTTCCGTCTTTTACTTTTATTGCTTAACTATGTCGTCGCGAGCGCGGGGTAGAATAGCCAAGTTATGTGCGGTTTTAACGCCGCGCATATTTGCAAACACACTCCTGCTGTGGAAAGTCCATAGCCGATAGTCCGAAGGAGGTGGGTGATGTCTGCACATAAGTATGAACTGATGTTCATTGCAAATCCTGAGCTGGATGAGCACGGTCTTAAGAAGTTGACCGAGCAGTATCTTGAGCTCGTCACCAACGAGGGCGGTTCTGTTGACGGTACCGATTACTGGGGTCGTCGCAAGTTCGCTTACGAAATCGAAGGTAAGACTGAAGGTAACTACGTTGTGGTTAACTACACTGCTGAGCCAGCCGTAAGCGACGAGCTTGACCGTGTTTTGAACCTTAACGAGTCTGTAATCCGCACGAAGATTCTTCGCAAGGACGCTAAGTAAATAAATCAAGCAAAAGCG # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTGGAAACATTTGCCGTGTTTTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //