Array 1 106815-113852 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT854639.1 Haloimpatiens massiliensis strain Mt13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 106815 30 100.0 35 .............................. TTCTCCTTTCTACATTTTAGATAAGGGGATTTATC 106880 30 100.0 36 .............................. GAAAGAGGCTTAGGAGAATACATATTAACAGTTACA 106946 30 100.0 34 .............................. CCCATTTGTACTATAGAATCAGCTAGTAATTTTT 107010 30 100.0 35 .............................. TAATAATGAAAAACAAAAAATAGACGGATATACAA 107075 30 100.0 35 .............................. TTAAGGATACAGCATACTTCTTAAGTCATTACTAT 107140 30 100.0 34 .............................. GATAAATATTATGTAGGAATAACAAGGCAAGAAA 107204 30 100.0 36 .............................. TTTCTGGACTATTCCATGCTTTTTCTACTGCTATAA 107270 30 100.0 37 .............................. AGCAGTACTAAAAGGAAAAAAGAGACCACAGTTATTA 107337 30 100.0 36 .............................. ACTAAATCTTCCGCATAACCTTTTGTTACCCACCAT 107403 30 100.0 35 .............................. CTAGCAAGTATTCCACCTTTACCATCTGTTCCTAT 107468 30 100.0 36 .............................. GCAATTTGTATTAAAAGATCTTTATCTGGAAATCTA 107534 30 100.0 36 .............................. AGTATATGAGACTAATGATCCAGTAGCTAGTTGGAC 107600 30 100.0 35 .............................. CATTAAAATCTTTCTTTTATTTAGTGTTGTTATCT 107665 30 100.0 36 .............................. TAACTTAGCTTCTTGGGGGAGTTAAGTTATTTTTTT 107731 30 100.0 35 .............................. ACGGATATTTTTCCATAGGATTTTCGCTATTCCAT 107796 30 100.0 35 .............................. CAACCCTAGTGTACAAGCCATTTGTAAGGGTTTTT 107861 30 100.0 36 .............................. CAAAAGAAAATTATGAGCCTGCAACTATAGAAGTTG 107927 30 100.0 36 .............................. CAGGATTTATATTTGCGCTGCTGTTTTAGGTATAAT 107993 30 100.0 35 .............................. CCAGCGAATGTAATATGTGTATATGATGGTATAGG 108058 30 100.0 34 .............................. AATAAGTTAGGGTGGATTGATATGTTAGAAATAG 108122 30 100.0 35 .............................. AAACATTCCTTTTGATTTATTATGAGCTCTGGTCT 108187 30 100.0 37 .............................. GTAAAACAAAAGAAAGTACTTACATGGTGGCTACCCA 108254 30 100.0 36 .............................. TATTATTCTCCATTCATTTTCATAAGACCATTCATT 108320 30 100.0 35 .............................. TTGGTGTAATTTTGTAAAGTAGAATAATTGTGAAA 108385 30 100.0 36 .............................. TCTACTGCAGCCTTAAGTAAGTCTTTGTCTACTTCT 108451 30 100.0 36 .............................. GAGGAAAAAAACAAAATATAGAAGTCATCTGCAACT 108517 30 100.0 36 .............................. GTAATAAACTTGTAAAATCCTTTTATTCCATCTACT 108583 30 100.0 35 .............................. ATTTTTAGAGTCTTACGATTTAACAGATGAAGAAA 108648 30 100.0 35 .............................. TCTTTACTATCCGCTCTATATTTTCTACCATGTAA 108713 30 100.0 36 .............................. ATATATCGTTTGTTTAATTCTCCTTTTATGACCTTA 108779 30 100.0 35 .............................. CCCCAAACATTGTAAATTTTAATCTTAGAATCTTT 108844 30 100.0 35 .............................. ATCGCCACTAAGGCTTTGTTTAAATGCCTGTTTAT 108909 30 100.0 36 .............................. TTTTTGCACCTCCAAAATTAAAAGAGCCTGCAATGC 108975 30 100.0 35 .............................. TATATGAGCAAAGCACAAGTAACATTTGCAAAAGA 109040 30 100.0 35 .............................. ACATGTTTTTTAACTTTTCCGGTATTGCAACACCT 109105 30 100.0 36 .............................. GGCACAATTTCAAATTGGGAAGTATTATATTGTGTA 109171 30 100.0 35 .............................. TTCTCAACAATAGGTAATAGATTAAACAATATCGA 109236 30 100.0 35 .............................. GATAAAGAAGCTCCGCACATATTAGAAGGTAAAAT 109301 30 100.0 35 .............................. GATCTCGTTTTAATAGTAAATCCATTTGACTATTA 109366 30 100.0 37 .............................. CGGAGCAGTATCTGTTTATAATTTACGCCAAATAGAA 109433 30 100.0 36 .............................. ATCCAATTATACCCTTTGTAATAACAACCATTAGAC 109499 30 100.0 36 .............................. TATAGAAACTAAAATAACAATATGCTGTGTACTCCT 109565 30 100.0 36 .............................. ATATTTAACAAAATATTTACGATAAAACATGAATAA 109631 30 100.0 37 .............................. CAAGTAATGGATAAAACTTTAAATAAAATATGCTGCA 109698 30 100.0 36 .............................. AGTTGTTAGCGTGGAAGGTCTACACAGAACGAATCC 109764 30 100.0 34 .............................. TTCCTCTTAATCGAACGACTGCACAACCTTCCAT 109828 30 100.0 36 .............................. TGGCTTTTGTAGCAGCTATGTGTGCGGATGGTACAG 109894 30 100.0 35 .............................. CATTTTCTAGCATAATTTTATTCTCTTGTAAATAT 109959 30 100.0 35 .............................. AACAAAAACTTATATATTAAAAACGGCTGTAGGTC 110024 30 100.0 36 .............................. GGGTATTTTGGCATAGTAACATATTGCATAGGATTT 110090 30 100.0 36 .............................. TGTATTTGGGTGGGGTGGGCTCCATGGTGCTAGAGA 110156 30 100.0 35 .............................. GTATATTAAAATCTAAATTATCTACAGCGGATTTG 110221 30 100.0 34 .............................. GATATATGTAGGTGATGGGGAATGGAAAGACCCA 110285 30 100.0 36 .............................. TCACTATTCCCTCCCGAATGTATATGTAATATTCCA 110351 30 100.0 35 .............................. AAGGCTCTAGGCTCTATTTGTTCAATAAATTTACC 110416 30 100.0 35 .............................. AGATTCCATGCGCTATCGCCATTATTCTTATCTTT 110481 30 100.0 36 .............................. ACAATGGAAGCTGAAAGACAAACTGGAATATGTAGA 110547 30 100.0 36 .............................. TCATATACTTTCATTAACTCATCCCAGCTTAATGGA 110613 30 100.0 35 .............................. CTAAATAAGTTGGATTATGATTTACCAATAGTTAA 110678 30 100.0 36 .............................. TAATTATTCACCTCAATTAAACTGATTTCATTGTTA 110744 30 100.0 36 .............................. GGACATAGTTTAAGAAAGACTTACGCTAGAAGACTA 110810 30 100.0 36 .............................. AAGTATAAAAACATTTATGATTATCGTATGCAACTT 110876 30 100.0 35 .............................. TTATAATTTCTTATATCTTCGTCTAACCCATAAAT 110941 30 100.0 35 .............................. GATAAGAGAATACCAAGAAAATTAGACAAGCAGTG 111006 30 100.0 34 .............................. ATGGCATAAACGTTATTTAACTTTTCTCTTTTTT 111070 30 100.0 35 .............................. TCAATGTGAAAAGGATAATGATATAGAACATTTTT 111135 30 100.0 35 .............................. TGATGTGGAGCAAACAATGGAAGTATTTATTAATC 111200 30 100.0 37 .............................. TAGCTTTACTTATGCAAAAATTTGCGACCAAGTATGG 111267 30 100.0 35 .............................. TAATTAAGTTAGTATGCTATACTAGATATAATCGG 111332 30 100.0 34 .............................. TTAGATAGTGATGTAGAAGTAGAGTTTGAAAACT 111396 30 100.0 36 .............................. ATAGGTACATTTAACTCATTCATTAAATATTTAACT 111462 30 100.0 37 .............................. AATAATTCTTACCATTTGCACAGCTTAAAATTATCAA 111529 30 100.0 35 .............................. TTGTAGATATTAACCAAGGTTGTGATGTTAGGCTT 111594 30 100.0 36 .............................. CAATCAGAGGATAGGGTACACAGAATAGGTCAAAAT 111660 30 100.0 36 .............................. CAGACTATAACACAACGTTATTTACTTTAGCTGACA 111726 30 100.0 34 .............................. TATATTGTTCCTTGAAATTGTAATAATTTATCCA 111790 30 100.0 36 .............................. TTGGTGGTCCATAAATAATATAGACTGCTTTCTCTT 111856 30 100.0 36 .............................. TAGAATTGACAATATAGAAAAATTAGAAAAGGAGGA 111922 30 100.0 36 .............................. ACTATTATTGTCTTATTCTCTAGTATTTCATCTCCT 111988 30 100.0 34 .............................. TTAAGATTATTTTTTATCTGTATCTTAGCAACCA 112052 30 100.0 36 .............................. TAATAAACATCACAAGAGATTCTCTGGTGGAGGTCA 112118 30 100.0 34 .............................. AGCTATAAGAGAATATACAGAAGATGTAAGTACT 112182 30 100.0 36 .............................. CCAGCATTAATCTTTTTTTTCATTTAGATTTTCCTC 112248 30 100.0 37 .............................. AATCACAAGAAATAAAAAATGAAAAGGCTGCTTTAAA 112315 30 100.0 35 .............................. TTAACTTGGCATTTCCAATCATCAGGTTTGCTTAG 112380 30 100.0 36 .............................. TGATATGTGTTAGATATAAATTTATGTGACATTATA 112446 30 100.0 35 .............................. ACATCTACGTAACCATTTTTTAAATCATACATTTT 112511 30 100.0 37 .............................. GGACTATAAGTATTTACGGTAACTTCTACGCTTTTAA 112578 30 100.0 35 .............................. TCCATAGGGCACATCAAGTCCGGATGTACCATTAA 112643 30 100.0 36 .............................. TATCCCTTATTTTATTAATTACTATATTTGTTTGTT 112709 30 100.0 36 .............................. TACATTATTAAACTACTTCCTACATGAACCATAGAT 112775 30 100.0 36 .............................. TTAAAACATATTGTAATAGTTTCTTTATTGGGTGTA 112841 30 100.0 34 .............................. ACCGAACCAACAACAAAAGATAAGTCGCACGACT 112905 30 100.0 37 .............................. TTTTCTTTGAAAGTCGATAAGTTTTTGATATATTCAA 112972 30 100.0 35 .............................. GTATCTTCCCAACGATCCTTATTTGCATAAAAGCC 113037 30 100.0 35 .............................. CATAGAACTAAAAAAGAATTAGCTCTAAGAAAAAA 113102 30 100.0 36 .............................. TTCCATAACGGAAATTTCTAACCTTATCTAATTCTA 113168 30 100.0 34 .............................. TAGGAGAACCACATTTTGAACATTTTAATATGCC 113232 30 100.0 36 .............................. CCTTTCCACTCCGTGACCATAGCAACTGCAGTGTTA 113298 30 100.0 36 .............................. ATAACATTGTCTTCCTTTATTTCCTTTAGCATATCA 113364 30 100.0 35 .............................. GCTACTGTTTTACCATCTTCTAAATAAAGTTCAGT 113429 30 100.0 36 .............................. TCCTCTAATTATTTTTTATATGCATAAACCTATTGA 113495 30 100.0 36 .............................. CAAAAGATGAATTTATATCTTACTGTAAAAAAATAA 113561 30 100.0 35 .............................. CTATTCTTTCCAATATTTCCTGTTGAATATTTTCC 113626 30 100.0 36 .............................. ACGTTCCCTTTAAAGAGAACCCCTTTATCATTAATC 113692 30 100.0 36 .............................. ATTAGCCAAAGGAACACAAATTATAGGTCAAGTTGT 113758 30 100.0 35 .............................. TACCTTTTATTGCAGAGGCATTTGCAACTAATAAG 113823 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 108 30 100.0 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : TTTAAAACATCTTTAAAAGGAATTGATTTTACTTCAAGCCAGCTGGAGGGCATCGTTATATCCTCAGAAGCAGTAGAGTTAAAGGGCGCAGTTGTAAATATGTATCAGGCAGCGGATTTGGCGAAGATGTTGGGGGTAGTGGTGAAGTGAGTAGAGAGATGGTACTTCAAAGGGGAAAAAAACACATTGCGAGTTAACAAGATAAAGTGTTGACTATGCTTTTCAATTTTTATAATGATGCATTTAAATAATTGTTAAAATTTTATGTGGATATACACAAAATGTATTAGATTAGAATAATACAAAATTATTTAGTAAAGATATTTACCAGGTGAAAATTGTAATGAGTAGTGTGTAAGGTATTGATATAAGAGGCGTTGCACTATATTTAGTGTGTGATATAATAAAATTAAGAAACGGTTGGTAAATTTTCGTGGGAATCGTTGTATATCAGTAAATGGAGGTATTTTACTAAAGATTGGAATGGCTTAAAATCAGTG # Right flank : TCTTACTGTTATCTCTTTAATATCATTCATTTTTAGTTGAATGTTAAACGTCAAATTTCTCCTAATTTAAACGTCAGTTTATTTCTATAATTATTGTACAATTTACGTCAAATTATTTCTACAAAATCACTTTATTTTTAATGAAAAATCATTTTGCACCTAAAAGAAAAAGGAGCTAGCGCTCCTTGTGATTTTAATGCAATGATATTTCATTGGCGGCAGCCATTATTATATCAGTATCGATTACGTTTTTTTCGTGCTGCGCACCTATTATTAAAGCTTTAGTTAATATCATATTTAAGCGTCTTATAGAGCCAGCACAACTTCTATATGCAGCCAAAACAGCATTGTTATCAAATATTTCTGGCGAAGCCCCTGCTAATGATAATCTAGAATTAATATATTCTAAAGCTTCAAGTTCAGAAAGTCCTCCAAAATTATAATTTATTATAATTCTTTGCTTTAATGCCTCATGTATCTGTTTTTCTAAGATATTATTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 117044-117853 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT854639.1 Haloimpatiens massiliensis strain Mt13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================================================================================================================================================== ================== 117044 31 100.0 34 ............................... CATAGAACTAAAAAAGAATTAGCTCTAAGAAAAA 117109 31 100.0 35 ............................... TTCCATAACGGAAATTTCTAACCTTATCTAATTCT 117175 31 100.0 33 ............................... TAGGAGAACCACATTTTGAACATTTTAATATGC 117239 31 96.8 35 C.............................. CCTTTCCACTCCGTGACCATAGCAACTGCAGTGTT 117305 31 100.0 34 ............................... AAGAAACTAAAGAGATAATAGTAAAAGAAATTGT 117370 31 100.0 34 ............................... TTAAAGTGGATGATGATGGTGGAGTAGATAAGTT 117435 31 100.0 33 ............................... TGCAACAAGGAATTTGTAATGAAGCGAGAAATG 117499 31 96.8 34 C.............................. TTCCCTGCTCACCATCTACTTTATAAGACCACAT 117564 31 100.0 33 ............................... ATCCTTATTTTGGTGGAGTATCTTCTTTAAGTT 117628 31 83.9 163 .T......C.......G......GC...... AAAATTATTTAGGGAATAGACATTATAGAGTAAGTGAAGTAAAATCATTAACGAGTAAGAAATAAAAATATTTTTACTATATAATTAAAACGTGGTACTATTTATAACAAGTAACCATAGCATTCTATGCATTTAAATTTAATTAAGATTATAATTATTTCCA A [117632] 117823 30 77.4 0 .T......CG......T.A.....-G..... | T [117828] ========== ====== ====== ====== =============================== =================================================================================================================================================================== ================== 11 31 95.9 47 AGTTGAACATTAACATAAGATGTATTTAAAT # Left flank : GCATGACGGGCAAATATATCTATTGATAGTTATTATATTATCGTGAACTTCATTATTATCATAAGTCACAAGATGGCGTTTATAAGAGGCAAATAGGGATAGATCGTGTTTAGATCCGCAGAATGGACATACCAAAGCCTCTGAATTAACCGTTTTCATATACTCTTCAAAAATATTTATCTCATTTTCAAAAGAAATTTGTTTAAAACACTTGCATAGTTGTGAAAATAATCTTATCATAATAATAGGTTGTAAGAGCTTACGCTCTTATTTTTAGGGAAGAACCTTCGCTTTGCACGGCTTGGGGTTCTTCCCTTTCCTTTCTCTAGTTTTTATAATAAGCTTAAAATAACCTCCAAATGATGTCAAGTCATTAGGAGGTTTTATTTAGCAATAATATGATTATTTAAAATGCATTTAATTACTGGATAGTTATTGGAGTTATAGTTATAATTTGACTTAGAAATGCAGTTTTCAAAAGCTATATTTTGACGCACTAC # Right flank : TAAACTAAACTTTTTAGTTTATTTATTTTACGTAAAAAAACATCATTAATAAAGATTATAATAATTTATTGACAATTCAGAATTTAGTATTATAATTGGAAATAGGAGGTGAAAAAATGAGAGTTTATGAAATGATATTTAAAGTTTTTCTTCTAAGAAATATTCATAGTACAGAAGCTTTAGAAAAAATATCAGAGCTTATAGATAAATCTTTGGCCAAAGAAGAAGAATTCTTAAATTTTCATAATAGTAATAAGTTCAAGAATTATACTTTTAATTCCTTCTTTCCGTTAGAAAAAGATAAAATTTACAAGGAAGGGAATATATACTCTATAAAAATACGAACTATAGATGAAAAGTTGGTACAATTTTTTAAAACCAATCTTGTAAACGAATACACAGATTCTATAAAAGTATTAACGGTAGAATGTAGGTATATAAACAAAAGATATATTGAAAGAATTTATTCTTTAACACCAATGATAATGAAGACAGACAAT # Questionable array : NO Score: 4.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-1.27, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : CGTTGAACATTAACATAAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.65%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 126858-130152 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT854639.1 Haloimpatiens massiliensis strain Mt13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 126858 30 100.0 35 .............................. TGAAATCTTATTCTTTTTACATTGAGTTCTTTTGA 126923 30 100.0 36 .............................. TTGCATCTATAGCAGTATTAAGAGTTTCTTTTGCAT 126989 30 100.0 34 .............................. CCAGTAATATTGCTACCATTAACTTTTATATCAA 127053 30 100.0 35 .............................. AGAAGAAGAGACAGGAGAGGCACCGGAAGGCGGTG 127118 30 100.0 36 .............................. GAGTTTTTCGCGTTTTCGCGATTTACTGTATAATCC 127184 30 100.0 35 .............................. TTGTAGTCCTCGAAGCTTATATTTAAACCAATATT 127249 30 100.0 35 .............................. AACAACCTATTAATTTAAAAGTTGGCTCTAATTAC 127314 30 100.0 38 .............................. TACGCATAAAGTCGATATACCAAAACATACGCATGCAC 127382 30 100.0 35 .............................. AGAAGAGAGAAATTCAAAAGAATATGCAGAATGGA 127447 30 100.0 36 .............................. CTACAGAATATACAATATGCTTATTAACTGCATTAG 127513 30 100.0 35 .............................. AGGAAAAGTATTTAGTTTAACTGGTAAAACAGAAG 127578 30 100.0 33 .............................. ACAAGGAGAATCTATTATTAATTGGGAAGGAAA 127641 30 100.0 36 .............................. ACATGATGAAAAACATGATGGCTGGTATTGAAAATA 127707 30 100.0 36 .............................. CCTTCTCAATTACATTATATACCATGTAATTGAGAA 127773 30 100.0 35 .............................. TGCTTTATAAAGTAATTTTTAACACTTCTTAATCT 127838 30 100.0 36 .............................. GTTAAAAGGAGCAAAGGATCAATTAAAAGTTTTAAC 127904 30 100.0 36 .............................. AATTGTTTATCAAATACAGTTAATTTAGGAGGGATA 127970 30 100.0 35 .............................. CTATTTCCAACAAATATATTAGGGTATTTTTCCAT 128035 30 100.0 35 .............................. GCACCTTCTATAATTATTCCATTATCGCAATCACA 128100 30 100.0 35 .............................. ATGTGTAATTACAAAACTTGAACAAAACATTAAAA 128165 30 100.0 35 .............................. ATAAAAGATAGGTATATTGACTAAGCTGTAAAATA 128230 30 100.0 34 .............................. CAAATAAAAACATAAGTTATCAGCACCCAGATAA 128294 30 100.0 35 .............................. TTAACAACTTTTTCATTTTGGGCATGCATTAAATC 128359 30 100.0 34 .............................. AAACTAATTTTGTAAGTACATATTTCTCCTATAT 128423 30 100.0 35 .............................. AGGTAGAATATTAAAAATCTTAAATAAACAAATGT 128488 30 100.0 36 .............................. GATGTAGCAGAAGAACTTGCAAGGTTAGAGGAAGAA 128554 30 100.0 35 .............................. ACTTCTGATGTATGTCCTCTATGTAAAGGAACTAG 128619 30 100.0 36 .............................. CCGGATGTGAATGTAGATGCGGTAGAAAAGCATTTA 128685 30 100.0 36 .............................. GGAAACTGACGGTATCAAGGTTTGATGGAGATTTAG 128751 30 100.0 34 .............................. TGTTAGGAAATTTAAAAGTTACTTCTTCAACTCC 128815 30 100.0 36 .............................. TTAAAACTGTGTCTAGTATTAAATGAAAAACCCTTC 128881 30 100.0 35 .............................. GATATTTGTTGCACATTTTCAGCCAATTGCGTATC 128946 30 100.0 37 .............................. TAGTTTTATTTATCTTTACAATTTGACCTGGCATAAC 129013 30 100.0 35 .............................. AAGCACCTTTACCAACTAGTTTTAATCCATTAGCT 129078 30 100.0 35 .............................. TAAATGGTACGCTTTCTTTTATTTTCTTTTTTGCA 129143 30 100.0 35 .............................. TCTAACATTAAAGTAAAATTTTCTAACTGTGCTAA 129208 30 100.0 36 .............................. CTGGCCTGCTTAGTAGTATTAGCCGTTATGATAAAT 129274 30 100.0 35 .............................. AGCTAATCTAATTGGCAGTTTACGTATTGTTAATT 129339 30 100.0 36 .............................. AGCTTTTGCGCACTTGAAAGAGCGTTCCATCTGTCA 129405 30 100.0 35 .............................. ATCCGTTAATGTATCGTAGACTTATTATCTGCCTT 129470 30 100.0 35 .............................. GCAAGTATCGTTTTTAAATAATCTCTTTCTTTTAT 129535 30 100.0 35 .............................. GTAAGTTCTTCCTCGAATTCTGCCAGGAAACCCTT 129600 30 100.0 35 .............................. TAACAAAGAAATAGATAACTCTAAAATGACTTTAG 129665 30 100.0 36 .............................. CTTGGAGCAGTAAGGGTTCTTATAGATGAATCACTC 129731 30 100.0 35 .............................. TAAAGACCTTAGAGGAAAAATAGACGAGCATATTC 129796 30 100.0 37 .............................. GGAAATAAAATAGCATTAGAAACTAATGGGGCTGGCA 129863 30 100.0 34 .............................. TGTGCTTATATAATGCAACTCCGCCTGCTGTCGC 129927 30 100.0 36 .............................. CTGGTGTCGATGTCTTTTATTACATCACCATTCATT 129993 30 100.0 35 .............................. TTATATTTATGTTCCGTTAATCTAGTGCAGTTTGG 130058 30 100.0 35 .............................. TTATCTATGAATTGTATAGAATTTATTAAATTTCT 130123 30 90.0 0 ...............AA.C........... | ========== ====== ====== ====== ============================== ====================================== ================== 51 30 99.8 35 GTTGAACATTAACATGGGATGTATTTAAAT # Left flank : TTAAAGGAGAAAATGTAATGAGTAAAAAACTTAATTTTAATTATGCGTTTCTTTTTTATGATGTTAATGAGAAAAGAGTAAATAAGGTGTTTAAAATATGTAAAAAATATCTAGCTCATTTTCAGAAATCTGTTTTTAGAGGAGAATTAACTCCCGCCAATCTTATTTTATTGAAAAAAGAATTGAATAAAGTTATAGATGAAAATGAGGATTTTATATGTATAATAAAACTAATGAATAATAATGTTTATGGAGAAGAGATACTAGGTATTAACCAAAATAGTACAGGTGAGGATTTAATAATATAATTATAATTTAAAACATTTTTACCAACCTATATTTATATAAAATTTTTATAATCTGCCTATTTTCAATAGGTAAGGGCCTATTCATAACAAACTTTATAATTTCACATTATGCTTGGTACTAAATTGATTTAACCATTGATTTTAGGCAGGTTTGAGTATATTATAGAAATTAGAAATGGCTTGTTTGCTGTG # Right flank : TTAATAGTTAAGCTACACCACTTATAAAAATTTTTGTATATATAACAGTTTGTATTTGGATTACTTTAACATATCTAATTATCCATAAAAAATACAAAGATCTATAAAAGAACCTTGTTTTATAAGAATTATGTAAGATTAATTGAAACTGGTCCTAGTATTACAAGTATTATCTGATCTAGCGTATGAAAATCATTCAAGTAGCTAAAGGGTTCCCTTATCGTATGTCTTTATAGAAATTAGGGATGAACACCAAAAATATTATTGGTACAGTTTTTGATATTCATCCTTTCTATTTATCCTCTTCATTTATTATTCGCTATTCATTCTTTTAACTAATTCTCTGCAAATCTTCCTGCCATTTCAGCTTAACTGTCCCCACTTTTCCATTTCTATTTTTTGAAATTATGTTTTCTATTATATTTTTTTCTTGGCTGTCTTTGTTGTAGTAGGAGTCTCTGTAGAGAAACATCACTACGTCTGCGTCTTGCTCTAGGTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //