Array 1 8964-9846 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHCSM010000013.1 Escherichia coli strain W3-1 NODE_13_length_104712_cov_48.052053, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      8964	    29	 100.0	    32	.............................	GAAATATAGCGTTAAATAGTCAGGTGACAGAA	
      9025	    29	 100.0	    32	.............................	CCCCGCGCCGCGCATCGGGTACGTGTAGTCAT	
      9086	    29	 100.0	    32	.............................	GTTTCTCATATTTCGCGTCAATCTCCACCAGG	
      9147	    29	 100.0	    32	.............................	TGGTTTGAGCCGTTTAAAGTTGAACAGGCGAC	
      9208	    29	 100.0	    32	.............................	GCTTTCAGTCGAGTGGCAGCTACGAGGAATCG	
      9269	    29	 100.0	    32	.............................	TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG	
      9330	    29	 100.0	    32	.............................	GAATATCGGGTGCCAGCCTGGACGCTGGCCGA	
      9391	    29	 100.0	    32	.............................	ACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA	
      9452	    29	 100.0	    32	.............................	GCAAACAGCTAACCACCGCCGGGGCGGTTTCC	
      9513	    29	 100.0	    32	.............................	CGATGATGTAATAATTAGAGCAGAATCCAGTT	
      9574	    29	 100.0	    32	.............................	GCGTCTCGAGCGCGGGACGATTCAAAACCAGC	
      9635	    29	 100.0	    32	.............................	CCAAAGAAGAACAACGAGCCAACTGGTTTCAG	
      9696	    29	 100.0	    32	.............................	GCAATTTGTTGTCCGCGATCCGGTACGCGCGT	
      9757	    29	 100.0	    32	.............................	CGGCTATGGAATTTATGGAGAAGTTTGGTTTT	
      9818	    29	 100.0	     0	.............................	|                               	
==========	======	======	======	=============================	================================	==================
        15	    29	 100.0	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT
# Right flank :  GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAACGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [73.3-43.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.51,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//