Array 1 69217-70741 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPOC01000008.1 Gordonibacter urolithinfaciens strain ResAG-59 ResAG59_contig_008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 69217 31 100.0 33 ............................... GACGCCATGTGTCACATCCGGCGCCACTACGAG 69281 31 100.0 35 ............................... GGCGGCGAGTTCGTGGCACCGGAAAAGCAGCTTTG 69347 31 100.0 35 ............................... GACACGACCACCATCCCGGCGTTGCGGGTGATGAC 69413 31 100.0 34 ............................... ATACCGAAGGCTACGCGCAAACGTAAGAGACGAA 69478 31 100.0 33 ............................... CCCCACGGCGTCCATGTAATCGTCGCCGTCCGT 69542 31 100.0 37 ............................... GCGCCGGGCTCGGTCTGGAGAGCTCGACATACGTCCA 69610 31 100.0 33 ............................... CAAGGTATTGACTCTGGTAAAGGGTTATTTTCA 69674 31 100.0 36 ............................... CAGAGCGGGCGGAGCGTCCACCTGCTGCCCCTTCTT 69741 31 96.8 33 ....................A.......... CGATGCGTAGCGGCTCGGCACGCCGTTGCGCTT 69805 31 100.0 35 ............................... CAGCACCTCCTCGCGCGAGAGCGCGGCCAGCTCGG 69871 31 100.0 33 ............................... CATATGGGTGCCCACGGGCATCTGCGATATCAA 69935 31 100.0 33 ............................... TCTCCTCGGTCACGAGCCATGTGTTGGTGTACC 69999 31 100.0 34 ............................... CAAGGCCCTTCGCGCGAAAACGTATTGCTTCGAG 70064 31 100.0 34 ............................... GGACGGCGAGTATGCTCACGTCGATCGTGACATG 70129 31 100.0 33 ............................... TACCACGCGAAAACGCGTGGGATTCTGCGAGAG 70193 31 100.0 33 ............................... CACGACCACCATCCCGGCGTTGCGGACGATTAT 70257 31 100.0 35 ............................... GAAGGGGGTGTACGACCTGTGGGAGTGGCTCCAGG 70323 31 100.0 33 ............................... CGACGGGTCGCTGCAGGAGTCGGTGCTGGAGGA 70387 31 100.0 35 ............................... CGCGGCCTCAACCTGATCCTCGGCGCGACCAAGGA 70453 31 100.0 35 ............................... CACTCGGCCCTGCTGCGCGTGGCGCGGCACATGGA 70519 31 100.0 32 ............................... GCCTCGACAACGTCGGCGTAGGAGTCCACGGA 70582 31 100.0 33 ............................... CACGCGGTAGTGCATGGGGTGCACCGTGCTGAT 70646 31 100.0 34 ............................... GCTCCGTCGTTTGGCGTTGTCGGTGCGATTGCGG 70711 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ===================================== ================== 24 31 99.9 34 GTTTCAACCCGCGAGCCCGTGAGGGCTCGAC # Left flank : GCACCGTGGCGTCCGCTTCGCCAGGCACGCTCACCTTGAGCGTGTCGCCGTCGACCACGCGCACGACCTGGGCTTGCTGGAGACCGTCCCCTACGGGGGCGATAGTCGCTTGGCCGTCTCGGCCCGGCGCGGCATCCTCCGCGACCCCGCCGCCCGCAGCGCCGAACCATCCAAGCGCGGCACCGATCACGAGCACGGCCGCAATGGCGAGGGCGGCAAGCGGGTTCTTCCGCGCCAACCGCCTTAAGGCGCGCCCTGCCTGCTGCTTCACCGACGCCATGGATCCCCTTCTCCCGTTTTTCTACGAACGAGAATTATAGACCAACTGCTTGGAGATCGCCGCAAGCTCCAACCTTCGCCGAGCCTCCTTGCAGGTAGCCGGGATTGCGCTAGCCGGCTCGCCGCTCGTCGCTACCGCCCGTCGAGGGGTGCGACATAGCATGTGCGCGGAGTCGGGCGGGCGTACACAGCTGGTCGATGCCGGCTGCTGCCCCCATGAG # Right flank : CTGTCAGGATATGCATATATACGTATATTCTGATTATCATATTCACATTAGACAATCAGTCCGCCCCATGAACAGCTATCAGCGGGCTTATGAAGCTTAAAACCTGCGCGAACCTCCCGAATGGCGCGCCATCGCTTGGGGTTCGCGCAGCACGCAATAGAGCTTCTACATTGTCAAGGTGCGCATTTCCTCTCACACGCATAGGAGCCCTTCCGGGTCATAAGCCTCCTTTGCTCCCACGTGCTCGACTTTTCGCTTCCAGTTCTTCCCGAGATTGTAGAACCGTAGGCTGTCACGCGTCAGGTCGGCCGCCTTCATCAGCTCGCTCTTCATTGTCTCAAACTGCGCCGGATCGAGCGAACATTCGAACACCGAGTTCTGCACGCGTTGGCCATACTGCACGCAAATCTTCGCAACCCGGCGCAACCGGCGAGATCCCTGCGGGCTTGCCGTTTCCACATCGTACGTAACGAGCACGTACATCGCTACCTCCAAATGAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACCCGCGAGCCCGTGAGGGCTCGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 81516-80296 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPOC01000008.1 Gordonibacter urolithinfaciens strain ResAG-59 ResAG59_contig_008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 81515 32 100.0 34 ................................ ATCGACCACATCTATCAGGCGTCCGCGCAGACGC 81449 32 100.0 34 ................................ CTGGACCGGGTGCTGCTGCACGAGGCGGCGCACT 81383 32 100.0 34 ................................ TCCATGTGCCGCGCCACGCGCAGCAGGGCCGAGT 81317 32 100.0 34 ................................ ATCGACCACATCTATCAGGCGTCCGCGCAGACGC 81251 32 100.0 33 ................................ CTCTTGAGGATCGAGCGGTAGGTCGAGCCGTGC 81186 32 100.0 34 ................................ TTCTTCGATATGCTGGCCAAGACCGCCCACAAAC 81120 32 100.0 33 ................................ ATTTCGCCCTCTCCGTTTCCTCGTGTCACGCCG 81055 32 100.0 33 ................................ TCCGTGTCGTACCGCTTGCCGTTTATGGTCTTG 80990 32 100.0 33 ................................ CAATGGACTCGTACTTTGATAATCACGCCGGAC 80925 32 100.0 36 ................................ AACGAAGCGGTTGACGCCGTTGTAGTTAACGGGGAT 80857 32 100.0 34 ................................ CACAGGCTGGAGCGGCCTGCGGTGAACTCCTTGG 80791 32 100.0 33 ................................ TCTCTGCTCGAAGCGGGTGCCCAGGGCGGCGCG 80726 32 100.0 35 ................................ TCCTTGGTGGCCGCAGGAATTGCCGCCGGCTGGAT 80659 32 100.0 34 ................................ TCCATGGTGACATGTTGGTGACACCGGGTAGGCA 80593 32 100.0 35 ................................ CACCAGCCCGTGCGCTCGCCCGACGAGGTGGCGCG 80526 32 100.0 34 ................................ AAAAAAGTATCAATACGGAGAAGGTTACACATGG 80460 32 100.0 34 ................................ CGCGGTATCGGCGTCTACGTGGACGAGGGCCTCG 80394 32 81.2 34 ......TT..TCG..................C TCGAAAGAGAGCGCCGAGTGGTAGCCTGAGCCGT C [80380] 80327 32 81.2 0 ..T..A...TTCG................... | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 98.0 34 GTCGCGCCCCATAGGGGCGCGTGGGTTGAAAT # Left flank : GGTCCCTGCATCGGCTCGGTCGGGCTCATCCCCGACCCGCAGCGGCGCAACGTCGATGCCCTCATGCTGGGGTACTCCCTGGCGAAGCCCGCCTGGGGCCGGGGCTACATGACGGAGGCGTCGCGCGAGGTTATCCGCTACGGTTTCGAGGAGCTGGCCCTCGGCCTGATCTCCTGCACGCATTACCTGTTCAACGATCGCTCTCGACGCGTCATCGAGAAGTGCGGCTTCGAACGCGAGGGCGTCATCCATCGCGCCGAGCCCGCTCCCGACGGCACCATGCAGGACCTGGCGACGTACTATCTGACGCGCGCGTCATGGGAGGAGGTCTCGCGCGAGAGCGCGCGAAACGGCGCGAACCCGAAGCTCTGGCAGTCCACTCAAGAGGTTCGCGCAGAATGACACGCCCAGAGGGATAGCTTGCTGGTTGCGCAAGGTGCTACGCATCTTGAAAAATGAATACTATAAGTGAAAAATGCACTATCCTGCATAAACTGCCA # Right flank : GCCGCTGCGCTAGCTTCCGATAAAACGAGTGATAGGCCTCGGCCTCTGCGAAGCTACCTGATTTGTCACTGCTGCAGTTGCGAAAGGGCTGTGAATTGGGTGCGCACCGTAGCGGTATCGCGCTCTTAGCACCGGTTTCGACAGACATTTGCGTCCCCATGCTACAATGCGCTCATGATGCGCGAGAGCGACATATACGAGCTGCGGCTGTTCGATCGGATCCTGATCGTCTTTCGCATGTCGCGCGGCGAATACGGTGATCTTTCAGTTGAGGTTCTCTCGGCAGACTCGTCGGCAAGTAGCCTTCTTCCGTTGTCGTTCGATGGAGAGCCAACCGACGAGCGTCTCTTCGAATGGATTCGTCGACGGCGCATCCCGAAGAATCGCGCCTATGTTGACGAGATACTCAAGTCGTGCGGCATCGAGTCCGACGATGCGAAATCGATCATCGATGTGAGCAAGGGCCTTTCGCTCAACGATTCCTATTGGGTTGTTCCTCG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCATAGGGGCGCGTGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 33286-34898 **** Predicted by CRISPRDetect 2.4 *** >NZ_WPOC01000010.1 Gordonibacter urolithinfaciens strain ResAG-59 ResAG59_contig_010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 33286 36 100.0 30 .................................... TGCATGTAAAGAATAATTTCGGAGTCATTG 33352 36 100.0 30 .................................... CCAGCACGCCGGACGCCAGCGCGTCCTGGC 33418 36 100.0 30 .................................... CAGCGCCGACGAGAAGGAGCTCACGGACAC 33484 36 100.0 30 .................................... AACCGTCGTGCCCCTTGAACACGATGATGG 33550 36 100.0 30 .................................... CATGGTGGGCAACGACCTCGTGCTGGGCCG 33616 36 100.0 29 .................................... TAGGCGAGACGGTGTACGCGCTGCAAGGC 33681 36 100.0 29 .................................... TTGGAATATGCACAAATGCCGATCAACAT 33746 36 100.0 30 .................................... CCTTGGCCGCAAGGCCAAACGCATCGGATA 33812 36 100.0 29 .................................... TTGCGCAGTAAGGCACACCGCTGGTCCCG 33877 36 100.0 30 .................................... GATACCCTTTGCTGGGATGATTATATATGG 33943 36 100.0 30 .................................... CTTCCTCGGCATCGAGAATGCGAACACCGA 34009 36 100.0 30 .................................... CTTCCTCGGCATCGAGAATGCGAACACCGA 34075 36 100.0 30 .................................... GGCAGAGAAGTACACGACAACGGTCAGTGC 34141 36 100.0 29 .................................... AGATCGACGAGGGTCGCCGCTGGATCTAC 34206 36 100.0 29 .................................... TCAAAAACGGAATCGTCCCTGTCGTGAAG 34271 36 100.0 30 .................................... GCCGGGGCGGCAGCTTCGGCCTTTTCTATT 34337 36 100.0 30 .................................... CCCGACCGAAAGGCCCAGTACATTCAGGCG 34403 36 97.2 29 ..........G......................... CCGAAAAGCTCCGGCTTATTGCACGAGGC 34468 36 97.2 30 .........T.......................... TAAACGGTTTGAAGGACGGCATCATGAGCG 34534 36 100.0 30 .................................... AAGCTCGCAAAGCTCGTCAGCGGAATCGCA 34600 36 100.0 30 .................................... GCCCGAGTTCTACGCCAACCGCTACAAAGA 34666 36 97.2 29 ...................T................ CCTCGCGCACGTACTCTCGCCTGTCAATG 34731 36 91.7 30 ..............G.......G.....G....... AAGCGGCTGATGCGCTCGTCGTATGTGCTG 34797 36 75.0 29 ..A..A.TA.G.....G...C.....T.......G. TCATCTTGGGCGCGTAGCCTTCGGTAGCC 34862 36 77.8 0 ..........G...G.TGG.G.........A....A | T [34895] ========== ====== ====== ====== ==================================== ============================== ================== 25 36 97.4 30 GTTTTGGAGCAGTGACAAACTGACTGGTAGTCAAAC # Left flank : CGCTTATCGGCGAGGTGCTTGAGCGTTTGGAGGACATGGTTTTGTCCGAGGACGAGGTGCGCCAAGAAATCGAGGCGGCGGGCTTGGCTTTGTCGAACCGGGTGGCATCGCTCGGCCTGCGGCTTCAGTCGGACTACGCTTTTGAAGTACAATGGGAAATGCGAAAATACCTGAAGGCCTTCGATTTCGGCGTCGAGATCGATCCTTCCGACAAGCTCCTTGACAACTTGATAAAGTTCTTGAAGTTTGCGTCGGACGCTGCGTTCGAAAAGCAGTTGGTTTTCGTGAATTTGAAAAATTTTCTGACCGGGGAAGAGGTCGAAGAGTTCTATCGGCAAGCGATATTTTCGAAGTTGCACGTGCTGCTGCTTGAGAACGCGCCCGATGACGCAACGTATGAGATTGAGAGGAAAATGCGCATTGACGTGCATTTTCTGCAATCATGAAAAGTTATGCCAGCCGGTTGTCCGTTCTTCTGCAGAAAGAATTTTGCCCCAACG # Right flank : ACGAATAGGGTGATCGACTCGCGGGCATCACTTTATTTCGGGGCGATTGCCTGTACCATAATAGGGATAGATAGTTTATACTCGCACGTAGGGATTGCAAGCGAACCTGTTGCGAGGAGGAACCATGGCCGTCAACCGTCAGAAGCTCAAGCTGCTGTATCTCATGCGGATGCTCGAGGAGGAGACCGACGCCGAGCAGGGCCTCACGATGTCGCAGATCCTCGAGCGGCTGGAGGCGCAGGGCATCACGGCCGAGCGCAAAGGCATCTACCGCGACATCGAGGCGCTGCGCGAGTTCGGCCTGGACGTGCGCACCTACCAGCGCGCGCCGGTGGAGTATGCGCTGGAACGGCGCGACTTCGCCTTCCATGAGCTGTTGCTGCTGGTGGATGCCGTGCAGAGCTCGCGCTTCCTCACGCAGCGCAAGAGCGACGCGTTGGTCGAGGCCGTGAAGAGGCTCGCGTCCGCCCGCCAGCGCGCGCTGCTCGACAAGCGCCTGC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGAGCAGTGACAAACTGACTGGTAGTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-24] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //