Array 1 164004-160926 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKUS01000007.1 Klebsiella pneumoniae strain EuSCAPE_IT141, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 164003 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 163941 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 163879 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 163818 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 163757 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 163696 29 100.0 32 ............................. GCATCGCTCGCCTCGTTCGGTGCTAACGCTGG 163635 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 163574 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 163513 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 163452 29 100.0 32 ............................. ATACGCAGTCATTAATCGCGGGTGTTACGCAA 163391 29 100.0 32 ............................. CCTGCTGTCATTTCCTTCGGCACTACCGGCGC 163330 29 100.0 32 ............................. CCTAAATTGCCAATTTTCCTTGAGCGCTGGTA 163269 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 163208 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 163147 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 163086 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 163025 29 100.0 32 ............................. TTTCCGGCAGCGTAGCCAACCCGGCCAACCGT 162964 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 162903 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 162842 29 96.6 32 A............................ GGCGCCGGCCTGATCACTATCGGGTAACGGTG 162781 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTTCACCTGGAA 162720 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 162659 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 162598 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 162537 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 162476 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 162415 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 162354 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 162293 29 100.0 32 ............................. GGCCCAGTAATCCCCGCGAAGTCCTGAAGACG 162232 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 162171 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 162110 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 162049 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 161988 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 161927 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 161866 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 161805 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 161744 29 100.0 32 ............................. GAATATAAAACCGGATTCCATATAGCCCTGTG 161683 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 161622 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 161561 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 161500 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 161439 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 161378 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 161317 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 161256 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 161195 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 161134 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 161073 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 161012 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 160954 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTCTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGGAAATCGGGCGCCATCTCATAGCCTGTCAATTCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //