Array 1 168471-171120 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHTM01000003.1 Klebsiella pneumoniae strain KP_301 NODE_3_length_246645_cov_18.6246, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 168471 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 168532 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 168593 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 168654 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 168716 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 168777 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 168838 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 168899 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 168960 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 169021 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 169082 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 169143 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 169204 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 169265 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 169326 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 169387 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 169448 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 169509 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 169570 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 169631 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 169692 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 169753 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 169814 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 169875 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 169936 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 169997 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 170058 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 170119 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 170180 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 170241 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 170302 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 170363 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 170424 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 170485 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 170546 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 170607 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 170668 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 170729 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 170790 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 170851 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 170912 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 170973 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 171034 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 171092 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //