Array 1 679009-687000 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHWR010000002.1 Gemmobacter fulva strain con4 contig2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 679009 31 100.0 36 ............................... GCCCGCGCCAGATTTTCCAGCACGCCGGGCGCAGGC 679076 31 100.0 35 ............................... TTCGCATGACCCCACTTTATGGCGAAATCAACCGG 679142 31 100.0 35 ............................... GCCCAATCCCAGACAGCATCGGTATAGGTGCCCAC 679208 31 100.0 35 ............................... GCGGCCACGGCGCGAAATCACGGGGCCTGCGGGGG 679274 31 100.0 35 ............................... CATCCGCAACTGGACCTTGGAAGGGCCGGGCTTAC 679340 31 100.0 34 ............................... GCCGCCATCATCCAAGCGTTTGCCCGCTTGCCCC 679405 31 100.0 35 ............................... AGTCATCATCGCCCCCACACCCCTGGTTAACGTGG 679471 31 100.0 35 ............................... CTGATGATCAGTCAGATGGAAGGCATCCAGCCGCG 679537 31 100.0 34 ............................... AGGTCTTGCCGGTGTGGGGTATCTCACCAATCAT 679602 31 100.0 35 ............................... GCCAAACTCGCCCCGCATCTCGGCCATAGACCGGC 679668 31 100.0 34 ............................... TCTGCTGATGCTGCCCGCGCCACGATGCGCGGTG 679733 31 100.0 37 ............................... ACAGGTGTGCAGCTCGGATACGGTGCGAAGATCCGTA 679801 31 100.0 34 ............................... CCAAGACGGGCTGATCGAGGTCGGCGGATGGACC 679866 31 100.0 34 ............................... CTGGCAGAGGTGTCTGGTGCGGTGGAGGCTTATG 679931 31 100.0 34 ............................... GGCTTCAACCCGCGTGCAGAGGCTTGGGCGCGTG 679996 31 100.0 35 ............................... ACCGCCAGACGTGTTGCGCATATCGGTGATAAGCT 680062 31 100.0 35 ............................... CCCCACCATGCCGGTCTGGCCGTGCGGAATCAGGC 680128 31 100.0 34 ............................... CTTGCTGCCGTGCGGTCGATCAAGACGCCTGCGC 680193 31 100.0 34 ............................... CTTTGCTCTGCCCTCCGAGGCCTCTTCCGAGGTG 680258 31 100.0 33 ............................... TATCGGTTGGGTTGTCCGCGTTGTCGCAGTCGC 680322 31 100.0 34 ............................... CAATATTGGCCGACCAAAATGACCAACGCCTACC 680387 31 100.0 34 ............................... AAGAGCGGACCCTTGGCAGGTGGTGGTGTCGGTG 680452 31 100.0 37 ............................... CCTATGGGGTCGGCCCGGATGGCTGCCTGATCCACAC 680520 31 100.0 35 ............................... CCCGACACGCGCCCGCGCCATGAGTGCGAGGCAGC 680586 31 100.0 35 ............................... CATTCGGCGCCAATGCGCCTGCGGCGCTGGTTTCT 680652 31 100.0 35 ............................... CTGATCGCGCGTAGGGACGGGCGGCCCATCGTCTG 680718 31 100.0 34 ............................... GGCGGATCATCAGGTTGATGCCTATGAGGCCTGC 680783 31 100.0 33 ............................... GGTCTTGTCCAGCAGGGCGGTCTGGATCGCCAG 680847 31 100.0 35 ............................... AATGGAAATGCAGCTTTGGCGATAAAGCCTACACG 680913 31 100.0 35 ............................... ATCGCTGCCCTCAGTCACCACCACCCACGCGCCAC 680979 31 100.0 36 ............................... GGTCGCACAGCGCGGTGATGAACTGCACAAGTTCAA 681046 31 100.0 34 ............................... ATTCGTGAAGATATAGCTTCTAAAAACACATAAA 681111 31 100.0 35 ............................... CCGGCAAGCTATTGCGGGCAAAGGCCCACGCCATC 681177 31 100.0 33 ............................... ATGCACTGCGAGGACGCATGACAGATCCATTGC 681241 31 100.0 34 ............................... CTCTATCGGGTGGCAGGAAATGCTGCGGGTACGA 681306 31 100.0 34 ............................... GCGCCGTCGCATGGGCAGGGACGGCGTGTCTCGC 681371 31 100.0 34 ............................... CTGTGGTCGCGGACAATATGCCGTGGGTCTCGAA 681436 31 100.0 36 ............................... TGCGGATGATCGGGGATGCCGTTGATGAGATGGACA 681503 31 100.0 34 ............................... ATATCCTTGGGGGTCTATTTATTTTGAAAGTCGC 681568 31 100.0 36 ............................... ATTCGGTTCAGCCCGCCGGAAATGGGCGACAACCGG 681635 31 100.0 34 ............................... GTTTATGGTGGTGGCATGCATTGGCTTGGGCGGT 681700 31 100.0 35 ............................... ATGGATCAGCCCTCGATCACGATGATGGTTGCGTC 681766 31 100.0 35 ............................... TTGGTGCGCCCATTTCGGCGGATCATCAGGTTGAT 681832 31 100.0 35 ............................... ATTGAGAAGATGGCTCACCAATCTCTCGTTGATGG 681898 31 100.0 35 ............................... GGCGAGGTCACTCTGCCATCTGGTGCCCCACAGCG 681964 31 100.0 36 ............................... TGGTATATCGTGGCCCACGGCGACAGCGAGATGGTC 682031 31 100.0 35 ............................... CGCGGCCGCCACCGGCACCGAAACCCTGACCAGCG 682097 31 100.0 34 ............................... ATTGAGAAGATGGCTCACCAATCTCTCGTTGATG 682162 31 100.0 35 ............................... GCCAGTGGCAATGGGTGAGTTTCTGCGAAAACACC 682228 31 100.0 35 ............................... AGCCCTCGCATCACGTCGCGCGTATCCATCTTGCG 682294 31 100.0 36 ............................... GCCGCGCCGTTGACCTCAATCACGATGGCATCGACA 682361 31 100.0 35 ............................... CCCTCTCTCGATTTCCGTTTGCTATGCGCCGGGGG 682427 31 100.0 36 ............................... ATAGGCGTTGGTTGTCACAACCTCATCCTTGCCGAG 682494 31 100.0 34 ............................... GTTTGATCGGCGCGGGGCATCTCGACCGCCGCAT 682559 31 100.0 34 ............................... ATCCAGGCTGTCTTCGGTTTTCGATGGCACCTTG 682624 31 100.0 35 ............................... ATCCCGAGAGCAAGGCCGACTGTTCCGGCTGCGCG 682690 31 100.0 35 ............................... ATTCGCACGCCGGTTTCTTCGTCCTGGTGCAGATC 682756 31 100.0 34 ............................... CAATAAAACCACCTTTTGGATTGGCTGACGCATG 682821 31 100.0 35 ............................... GTCGGGCACACCGTCACCGGCGGCGGCATGGCCGT 682887 31 100.0 36 ............................... TCCAATTTCTTCGAGTCCGGCGGACAGAAATACATC 682954 31 100.0 36 ............................... AACATCTATTCTGCCGCAGGGGCGCTTGGGGCCATC 683021 31 100.0 33 ............................... CAAGGCCAAGGGCGGCGCACCGCGTGACCGCAA 683085 31 100.0 34 ............................... GTCTGTGCGCGCGCCGTCGCCGGTGCCGTAGTAT 683150 31 100.0 34 ............................... GGCCATCTGGGTGCAGGGCGCGGGCATCAATCGC 683215 31 100.0 36 ............................... TCGACAGCCAGCGCGAGGATGATGACAACTCTGCGC 683282 31 100.0 35 ............................... CCCTATCTGGAATATGTGCAGATCGAGCGGCCCAG 683348 31 100.0 35 ............................... ATCACATACCTGCGCCGCCACCTCAAACGCCATCG 683414 31 100.0 35 ............................... CTCCTCGCCAATGACACGACCAACCCGGTGACCCG 683480 31 100.0 34 ............................... ACAACTACAGTCTCGCCATTGACCATATCCTGAT 683545 31 100.0 34 ............................... TCTGGCGCAGTCGCATTGCCCAAGGTCAGCTTTC 683610 31 100.0 36 ............................... TGTGTTGTCACAGAATGATTTTGTGATCGCACAGAA 683677 31 100.0 34 ............................... CGTCTCGCGGGTCCACTTGTTAACCGCCTGAACA 683742 31 100.0 34 ............................... CGCCAGATCATTGCAGACGGGGCAAGGCTGCCCG 683807 31 100.0 35 ............................... ACGAACTGCGCCTGCGCCTGCCCGCGATGGTCGCG 683873 31 100.0 35 ............................... TGTTGACCGCGTGCGGCGGCTCAATCGCCTTCGGT 683939 31 100.0 35 ............................... AGCCAGTCGTCATTGGTGCCGGTGGTCATTTTGCC 684005 31 100.0 34 ............................... GCGCTCATGCCCGCACCGCCTTGGCCCCGAAACA 684070 31 100.0 35 ............................... CTTTGAAAGCTGCCGTCGCGATATGGACAGCTATC 684136 31 100.0 34 ............................... ATCTTTCGGAGGATACAGCGCCACCACTCCGGAT 684201 31 100.0 35 ............................... TGGCTGCAGGTGTTTGGCGATGTGCGCGAGTTCTG 684267 31 100.0 35 ............................... GTGACCACCAGAAAGACGCGGAGAGCCTGCGGGTG 684333 31 100.0 35 ............................... CTTGCGCGGGCGGCGATGGCCGGGATTTTCGGGGC 684399 31 100.0 34 ............................... ATGCTTAATTTATAGACTATGTAGCGGTCAACCC 684464 31 100.0 34 ............................... CAGGTGCTGACCAAGCGGCCCGAGCGGATGCAGA 684529 31 100.0 35 ............................... ACGGTGTTGTCGGGCATCCGCCAGCCTTTGGCGCG 684595 31 100.0 36 ............................... GCCTCTCCCCATTTACCCCACACCAGCGGCCTGACC 684662 31 100.0 35 ............................... TCCCATTGCTTTGTCGAACCCGACCATCGCAGCGA 684728 31 100.0 35 ............................... TTTCAGGACGAGTTTGTCTGGGGTGCCAAGCGCCG 684794 31 100.0 36 ............................... AGCGCCAATTGCATCGCAAAGGTTTTTGCGCATCCG 684861 31 100.0 34 ............................... AGGAGCGGGAATTGGGCTTGGCCCTGCAACTGGC 684926 31 100.0 35 ............................... AACCCGCACATCGGCTGCACCAAGGTCGGCCCCGG 684992 31 100.0 35 ............................... AACCGCTCCATGCGCAAAGACACCTGTGTTCTGAT 685058 31 100.0 36 ............................... GGCCTGTTTGCCGACCTGCCGGAACAGGATCAGCGC 685125 31 100.0 34 ............................... CTGATGCTGGCCATATCGCACCCGCCCCAGGGCG 685190 31 100.0 37 ............................... ATTCGCGCGGGCAGCGATGGCCGGGATTTTCGGGGCC 685258 31 100.0 35 ............................... ATGGTACCGACGCCCCGGCTCGAACGGGGGACCCC 685324 31 100.0 35 ............................... TGCCATGACATATCCTCTGCATTGTCGGGGTGGCG 685390 31 100.0 35 ............................... ACCCGCCTCGGCGGTGACTTCTACATGTCCACGCC 685456 31 96.8 35 ............A.................. GCTGGCGCTCCAATCGACCGTAACATGGCCATGCG 685522 31 100.0 35 ............................... GCCACCAATCACACGGCGCTTGATGCCTCTGTGAC 685588 31 100.0 35 ............................... CAGCACCTGCCCGCTTTCATCGGGCATCCGGTCGA 685654 31 100.0 35 ............................... CGCACTGAGGCCGAACAAAACAAGGTCCTTGCGAA 685720 31 100.0 36 ............................... CTCCGCCGAATAGCCGATGCTGGGGTAAATCGCGCC 685787 31 100.0 35 ............................... TGGGCGTGGCCGGGGCAGGGGCATACATGGCCTAC 685853 31 100.0 35 ............................... TTAAGAGGGCCGCATGGCAACGACAATTGCAGGCC 685919 31 100.0 35 ............................... TTGCGACATCGTAGCGTCTCGACGCCAAATCAGCG 685985 31 100.0 33 ............................... GGTCAGGGTGATCTCGCCCTCGTCGATCTCGGG 686049 31 100.0 36 ............................... TGCCGGATGGGCCTCGGGCAGATGTGCGGCAATCAG 686116 31 100.0 36 ............................... GAGTGGAGGGGCAGCAGGCCCGATTTGTCGGACGTC 686183 31 100.0 35 ............................... CCGGCGCGTCGGAAATCACGCTCACATCGCTGGAT 686249 31 100.0 34 ............................... GCGCCGCTGGCCCCTGCCGAGCAATCGCGCGGTG 686314 31 100.0 34 ............................... ACCGCCGGATCGTTTCTGACCGGCACATTCGTCG 686379 31 96.8 34 ...............T............... GATGATGCGCGCCGATCTGGCCGGGCAGGTCGGA 686444 31 100.0 34 ............................... CAGCGCCTGCGCTTGGCTTTTAGCCTGATCCTGC 686509 31 100.0 34 ............................... CCCGTAGGGCGGGAGTTGGATCATGGTAGGGGTT 686574 31 100.0 35 ............................... AGCCCCTGCTCAAACTCACGGGCATCCAGCCCAAG 686640 31 100.0 35 ............................... GCCTGCGGCCACTGCGGCCACGAAACCGGCTGGAT 686706 31 100.0 34 ............................... CTCGCCCACGATGCGCAACCCGCCCTTGTGGGTG 686771 31 100.0 35 ............................... GCGGATGTGGACCATCCGCTTTTGCGGCATCTGGG 686837 31 93.5 36 .....A.....................C... CACTCGGTAACGTATCGCGAGAAATTCGTATCGACA 686904 31 96.8 35 ...........................T... CACCGGAATACTGTTGCCGCGGCCGATCTTGAGGC 686970 31 90.3 0 ......T........A..............G | ========== ====== ====== ====== =============================== ===================================== ================== 122 31 99.8 35 GTCGCCCCCACCCGGGGGCGTGGATCGAAAC # Left flank : GTTCTGGAGCTGAGATGCTGGTTCTGGTCACATATGATGTGAACACACTGGAGGACGGTGGTAAAAAGCGCTTGCGCCAGGTCGCCCGCGCCTGCGAAGATTGGGGCCAGCGTGTGCAGTTTTCTGTTTTCGAGATCGAGGTGGATCCGGGCCAATGGGCCAAGCTGAAGGCGCGATTGGAAGGGATCATCAAACCATCGCATGACAGCCTGCGCTACTATTATCTGGGCGCCAACTGGACCCGCCGGGTCGAGCATGTCGGAGCCAAGCCCGCCACCGACCTGAACGGCCCGCTGATCATCTGACACAGAGCCCCCTATCCGCTGCGAACCCCAAGCGTGCCATTTTCCGGCCCAGGTTCGCAGCAAGGACAGTTCTTTGAAATCGTTGATAAAAGTAAACTGACTCGGGTGGACAGTGCCCGTGGCAGCACATTTTCTCGCACATCCGCACCATCCCCACAATTTACCCATGCTCCCCAATCCTCTATATCCCCCCAC # Right flank : AGCGAAGCAAACATGGCGATACGTCAGTGCTTTCTATCGTCTCAAGCAGCGTCATCGGCGGGGCGTTACCCGCAGCGCTGACGTTTCCCCCTCCGCCTAATCCAGTTTGAGGTAGACTCTGGCCCAACTGAAAGGACCAGAGATGAAGCGCAGCAGGTTCACCGAAGATCAGATCATCGGCATTCTGAAGGAGCACGAGGCCGTGATTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCACCCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //