Array 1 23531-24624 **** Predicted by CRISPRDetect 2.4 *** >NZ_PUAZ01000045.1 Enterococcus faecalis strain CVM N55706 N55706_S20_L001_R1_001_contig_45, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 23531 37 97.3 29 ....................................G ATCAGGTATTTACAGAAAGTTAGGGATAA 23597 37 97.3 29 ....................................T TCAAGTGTTTCTTTTGCCACTGCCCAATC 23663 37 100.0 29 ..................................... ACCTATTAACTCTAAACGCTATTATGACA 23729 37 100.0 29 ..................................... CTAGAATCGTGACAGAAAACTATTACTCT 23795 37 97.3 29 ....................................G ATGTGGCGATTGAACGTTTCTACAAGCTT 23861 37 100.0 29 ..................................... ATGAAGAAGAAAAAGAAGAATTTGAGCTA 23927 37 97.3 29 ....................................C TAAAATTGGCAAAGTTACACCCTTGGTTA 23993 37 100.0 29 ..................................... AAAAAGAATTTTTGAGAAGGTGCGTTGCT 24059 37 100.0 30 ..................................... GAATGTTTAGTTCTGGGTATCTCATATTTA 24126 37 97.3 29 ....................................C GTGTCGTAAAGCTCGACACCGTCAAAACA 24192 37 100.0 29 ..................................... GAATCACTTGAATTATTTGTAGAATCAAT 24258 37 97.3 29 ....................................T CTAACGAAATTCAGCGCAACTGACGGCGC 24324 37 97.3 29 ....................................C AGAAGAAAAAGAAGCTTTAGAGCCAACAT 24390 37 97.3 29 ....................................T CACACAGGAGGACAAGACAGACCCCTTGC 24456 37 100.0 29 ..................................... GATACCCCTAAATTTCGTACGTCGACCCC 24522 37 97.3 29 ....................................C CAAGTTGGTACGATTACTCAAAAATTAGA 24588 37 67.6 0 ......T..C.........A.A..ACAA..T.TC..C | ========== ====== ====== ====== ===================================== ============================== ================== 17 37 96.7 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Left flank : TGTATATCCTTATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCTCAAACTCTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAATTCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : CTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCGATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGGAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAATCCAATTTGCGATGACAACAGTTTTCCACTTTTTCTTCGTACCGTTTTCAATAGGATTAGCACTTG # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //