Array 1 35347-34647 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LR700019.1 Faecalibacterium prausnitzii strain P9224, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
     35346	    28	  92.9	    33	............T.C.............	CCCTGTTTCTTTCAATGCCTTCATTTCTGCTGC 	
     35285	    28	  92.9	    34	............T.C.............	CCTGTCGTTATACGCATAACCGGCCCCGGGCAGC	
     35223	    28	  92.9	    33	............T.C.............	CCGGGTGCAGCGTCACTAATTGCAGCAGAAATG 	
     35162	    28	  92.9	    33	............T.C.............	GGCGCTCGTATAACGCTGGGTTATGTGCAATAG 	
     35101	    28	  92.9	    33	............T.C.............	TATTACCAAAAACAGGAGGAAAATGAAATGAAA 	
     35040	    28	 100.0	    33	............................	CGGCTGAAGTGCCCGTCTCCGGCTCGATGGATG 	
     34979	    28	 100.0	    33	............................	TTTTTGCGCAACGGGTCTGGGATTTGGACTTTC 	
     34918	    28	 100.0	    33	............................	TAGTCCCTTGCACCCAATGCCCAGCAGTAAGCG 	
     34857	    28	 100.0	    33	............................	TGGAAACGGATAAATGAACGAAAGGACGTGTAT 	
     34796	    28	 100.0	    33	............................	TTATTTCAAGATGCTGACCGCAGAACATAAAGT 	
     34735	    28	  96.4	    33	..............C.............	CGGCCAGAGTGCCCGCAAGGCATTTGCCGTTAT 	
     34674	    28	  82.1	     0	..............C........TCCA.	|                                 	
==========	======	======	======	============================	==================================	==================
        12	    28	  95.2	    33	CTTTTCCCCGCCCATGCGGGGGTGATCC	                                  	       

# Left flank :   GCCGCCTCAGATGCCATTGTGGAATACGGCGCTCTCCGTGTGCGGGATGGTCAGCCTGCCGAAGAATTTTCGGCCCTTGTCCGGGGCACAGAACCTCTGCCGGATGTGGTGGCAAAGCTCACCGGCATCACGCCGGAGGAGCGGAGCGGCGGTATGGAGCCGCTGGCCGCGCTGGAGGCGTTTCTCGCATTCGTGGGCAAAGATACGCTGGTGGACTATCACCTGAAATTTGACCTCGATTTCTTGCGTGCGGCCTGCATCCAGAATGACAGACCCCTGCTCACCAACCGCAGCATCGATGTTTTGTCCCTTGCCCGCCGTAAGGTGTCGGGAGTGATGAACTATAAACTGCTCACGCTGGCCCGGCATTTTGAGGTTGCCCAGCAGGAGACCCATCGCGCCCTGCCCGACTGCCGCCTGATCCAGCAGGTCTATGCAAAACTGAATGAAACGGGATCGGCCCGCTGATAAAAATGCCGCTTCTATGGGATCTTTTTAGT
# Right flank :  ATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCGCATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGCTACGGCACCGATCCCTATTGCGCCAGTGCGCGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGCACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCTGCCCACGAGGCCGGTGCCATCGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACGGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATGTGGACCATCTCGTGTTCCCGGGCATGGTGTACATCTCCCACC

# Questionable array : NO	 Score: 5.71
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTCCCCGCCCATGCGGGGGTGATCC
# Alternate repeat :   CTTTTCCCCGCCTACGCGGGGGTGATCC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-12.20,-12.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,4.91   Confidence: HIGH] 

# Array family : I-C/E [Matched known repeat from this family],   
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