Array 1 83474-85639 **** Predicted by CRISPRDetect 2.4 *** >NZ_RRCU01000011.1 Halomonas sp. YLB-10 NODE_11_length_162207_cov_62.010451, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 83474 29 100.0 32 ............................. CAATCGGGCGACGTGGTGGTCGAGTCGTTCAA 83535 29 100.0 32 ............................. CGAACTCCTCATGCGTCACCCCCGGCGCGATA 83596 29 100.0 32 ............................. GCCGACCAGATGGGCTTCTGATAGCGCACGCC 83657 29 100.0 32 ............................. ACGGGGTGCCGCTGCCCCGGTTACGCACACCC 83718 29 100.0 32 ............................. ACTCAGGCACCGGGCAGACCTTTGACGAGGCG 83779 29 100.0 32 ............................. GTCCACCCGGACTGGGTCTCCAGGGTCATGCG 83840 29 100.0 32 ............................. ATGGCGTAACCTTCGTCCGTGTAGGAGGTGCC 83901 29 100.0 32 ............................. ACAACGCTATGACTGGGAGGCGATCGAGCGCG 83962 29 100.0 32 ............................. CGCACCGGATACGTCCCGTTCACCCGCTATGG 84023 29 100.0 32 ............................. GTGCCAGTATTTCCTTGACTGGTACGAGGGCG 84084 29 100.0 32 ............................. TTCTCCGGCGACCAGTCCTTCAGCACGGTCTG 84145 29 100.0 32 ............................. GAGTAAACATCATGTGAGCACTGATCTTGATC 84206 29 100.0 32 ............................. TCTTCAACGACTTCCTGTACTCGGCAGCCACC 84267 29 100.0 32 ............................. GCCCCCATAGCACTTACTTGTTAGCGTCGAAT 84328 29 100.0 32 ............................. GCGGCTCCGAGATTTACATGATGCTGACGGCC 84389 29 100.0 32 ............................. TACTTGCTCAGTGACAGCGGGCGCCCGTTGTT 84450 29 100.0 33 ............................. AATGTTGCCTGGCAATCGCACATCCATGACGTC 84512 29 100.0 32 ............................. CACACAGACCAAGAAGTCATCGAGGCGCTGGA 84573 29 100.0 32 ............................. CGCGCCTTTCATAAAAGGGTAAGAGATGACCG 84634 29 100.0 32 ............................. TTGGCGAAGACTCGGCCGCCCTCGGCATTGAG 84695 29 100.0 32 ............................. TGAAAGACCAGGCAAAGAAGAATGCGGCAACG 84756 29 100.0 32 ............................. TAGGATGGGGTGTCGATCGACGGCGCTGCCGT 84817 29 100.0 32 ............................. GTCGGCACCTCGACCTTTCCGGGAGGCGAACA 84878 29 100.0 32 ............................. GCCGACGCTTTCCCTTATCGTACCCGTCCTCA 84939 29 100.0 32 ............................. GTTGAGTAGACGCCGATGTCCTTGAACGCCTT 85000 29 100.0 32 ............................. GCGTCGGTCTGACACAGTACGGCGGTGATCTC 85061 29 100.0 32 ............................. TCGTCGCGCAGCACCCGCACCTGCTCCAGGTC 85122 29 100.0 32 ............................. GACGGATGATGCGAGAGACCACAAAGCAGTGC 85183 29 100.0 32 ............................. CCTGAACCCCCTACAAGCATCATCGCCGTGAT 85244 29 100.0 32 ............................. GCGTATCTGCCACTAGTAGTGTTGCTTTCGAT 85305 29 96.6 32 ............T................ CGTTCTGCGCGGAGCATATCGAGCGCTATCAG C [85310] 85367 29 100.0 32 ............................. ACGAGGTGCAGTGCAGCCTGCCGGGCGACCAG 85428 29 100.0 31 ............................. GGCGGGTGCTCAGGCTCGTTTTTACGACACA 85488 29 100.0 32 ............................. GGCGTGATGCGGTACGTGGTCGAGAGTGGCGA T [85490] 85550 29 96.6 32 ..A.......................... GCCGGGCACGTTGCCCAGGTCAGAGCAGAACG 85611 29 79.3 0 ........G...TTA..A.....T..... | ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.2 32 CCGTTCCCCGCAGGCGCGGGGATCAACCG # Left flank : CTGCCGGGGAGATCGAGGTGCCAGCGCCCCCTCAGGACGCCGTGCCACCAGCAATCCCCGCCGCCGCACCGAGCGGTGACGACGGTCACAGGAGCTGATGCGATGGCGATGCTGGTGGTAGTGACCGAAGCGGTTCCGCCGCGCTTGCGTGGGCGCTTGGCGATCTGGCTGCTCGAGCTGAGGGCCGGTGTCTACGTAGGGGACGTCAGCCGTCGTATCCGAGAAATGATCTGGGAGCAGATACAAGCCCTGGCGGAGGACGGCAATGTGGTGATGGCCTGGGCCTGGGCCTGTGCCGAGGAATCAGGTTTTGACTTCCAGACCTACGGCGATAATCGGCGTTTTCCGGTAGACCATGACGGACTACGGCTGGTGCGCTTTATTCCCAATTTTACAACCGATTGATTTTTATGGCTCTTTAAAAATCAGTAATAGCTAAAACGGCTGGTGGAAAGTTGCTTTAAGATTTTTCACTGCTAAAACAATCGTCTACGATTAGT # Right flank : GAGATCGATGTGGACTTAACCACCGGCGGGACTCCATTCCTTACAGGTACGGGGCCAAATGGCGCCAGAGTCCACGAGGCGAGAGGGTGGCTGTGGGCTCTGTGAACGCGAAGAAAGATCTGGGGCTAGCGGTATCGCCAGCGAATCAGTAGCAAGCTCACGCCGAAAACGACGGCGGGCATGAGCCCCAGGACAATGATGGCGGCATTGTGACTCATGAGCTGCCTCCTTTGACGGCGTCTTCGGCCGCGCGTAGATGACCGAGGTAAGTGGCAATCCCCGCCAGGGTCACTGTGGCCAGGCCTATAGCCAATAGTAACAGGCCCACCGGGGCGTGCCTGTTGATATCACCAGAACCAGGGGTGTCGGTCGAGTTACGGATGCCTGCGCAGGTCCTGAAGGCGCATGATCAGCATGCCGACCAGATAGACCAGTGCAGGCGACAGGCCGATGGCGGCGCCAAGCAGGAGTTCGTTGAGTGTCATGCCTTACCCTCCTCT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCAGGCGCGGGGATCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGTTCCCCGCAGGCGCGGGGATCAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //