Array 1 85584-85942 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJCVI010000007.1 Halorubellus salinus strain GX3 Scaffold7_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	==============================	======================================	==================
     85584	    30	 100.0	    33	..............................	TCAAACACTGCTGACGCGCCCAGCAGCGTCGCT     	
     85647	    30	 100.0	    36	..............................	GTTATCTGAGTAGATAGCCCGCTTTCCTCGACGCCT  	
     85713	    30	 100.0	    38	..............................	GTCCCAAAGGTAGACAGCGAACGTCGGCTTCGGGAACG	
     85781	    30	 100.0	    37	..............................	CTCCTTGGTGCTGCTCGCGTTCCAAGTCTGGAAGTTT 	
     85848	    30	 100.0	    35	..............................	TGCTAGCCGGATGAAGAATCGTTAGGATTCAAGCG   	
     85913	    30	  83.3	     0	.............A.........C...CTT	|                                     	
==========	======	======	======	==============================	======================================	==================
         6	    30	  97.2	    36	GTTACAGACGGACCCTCGTGGGGTTGAAGC	                                      	       

# Left flank :   CTTCCGGCCCATCGACCACGCGCACAACGCGCGGGTCGATGGGCCTCGCTACCGTCAGCGAGCGATGTGTGAGACCGTCTTCTCGACGATCAAGCGCACGCTCGGCGACACCGTGCGTGCGCGAACCTGGTGCGGCGAGTTTCGAGAACTCGTGTTGATGTGTGTCGTCCAGAACATCAAGCAGACGGTGAACGCGTGAAATCAAGCGACGTCTGGCGATTCACCACGGCCCTTTGAACGTAAGATTACCGAAGGCGACCTAGAGACGATCTCCCACGAGCTGTCGGATATGCTCGAAGCCGATGAGTCTGCCATCATCTACGAGATGAGCTCGGACTCTTACGTCGACCGAACCGTCGTCGGCGACGATCCGACTGACGACGCCCGGTTTCTCTGAGGTACCATCGACCCCCCGGGGGTTCAGGGGCTATCGATGGTCGACGGGAACGACCAAGTGAAACCACATACATAGCCCTGTATATGCCCTCGAATCGGGCATG
# Right flank :  TCGAGACGCCACTCACAGAAATCGAGATCCGCGACGTCGGGACCCGCCGGGTCTGCCCGCCCTGCACGCACTTCGCCCCCAGCGGTATCCTCCCAACCCCCACCGATGTAGACTCTGACCAGCGGGTTCTCAAAGAGAACAGTCAGAACCTCAAAACAGGCGACTACGGGCTTGACTGGAGCAATCCAGAGGAGGCCGTGTCAACAGCCACCGACACCGACTCGACACCGTCGCCCAGCGTGGACACTCGCGAGTTGCTCCTCGAATTACTTCGCGTCCACCAGACTGTCACTGGCGTCCCGACTCGTGAGGACCTCGACAAACACACGGACTACGGTGCCGACACCTACGCTGTGGAATTTGGGAGTATCGACGCCGCTCTCGACGCCGCTGGCATCACAACAGACACCTAGTACACCCAGGAGCGTCCCTTGCCTCCGCAGCGTCGATGATGGTCGATGGGAGGCCTCTCGAAGCCCCGGATAACAACGTTTCTCAGA

# Questionable array : NO	 Score: 6.12
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTACAGACGGACCCTCGTGGGGTTGAAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [6,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 93% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-6.50,-4.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0   Confidence: HIGH] 

# Array family : I-B [Matched known repeat from this family],   
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