Array 1 1410840-1410011 **** Predicted by CRISPRDetect 2.4 *** >NC_010729.1 Porphyromonas gingivalis ATCC 33277, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 1410839 36 100.0 30 .................................... TTTAGAGTGGTTTCTAATGCTTCTAGTTTT 1410773 36 100.0 30 .................................... AATTGTTCCATTATATCGTGCTTATTTGAA 1410707 36 100.0 30 .................................... TTTAGAGTGGTTTCTAATGCTTCTAGTTTT 1410641 36 100.0 30 .................................... TACCGAAGCCACTGACCCAACTACATTATT 1410575 36 100.0 30 .................................... TTGTCATAATATTTGTTGTTTGTATTGTTT 1410509 36 100.0 32 .................................... ACTTTCTATCTTCATTAAAGAATGCTACACCT 1410441 36 100.0 30 .................................... TCTTCGTTTTTGCCGCACGGGCGTTTCTTT 1410375 36 100.0 30 .................................... ATGATTCGCTATTTTGTCCCCGTTGCGGGA 1410309 36 100.0 29 .................................... CATGCTGTATTTTTATTATCATACTGAAA 1410244 36 100.0 30 .................................... GGAGATGGCGTAGAGGCACAAAGAGCCTAC 1410178 36 100.0 30 .................................... TTCATCAAGAATTTGTTTTGTTAGAGTTCG 1410112 36 100.0 30 .................................... TTAGTAGCAATAACGAAGAAGTGTCTTAGC 1410046 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 13 36 100.0 30 GTTGGGAATACCCTTAGTTAGAAGGGTGGAGACAAC # Left flank : CAAAGCTACGTTGGATGAAGTCAAGACTTTGTTGGGCGAATATGATCGCTGCCGCATCAAAATCTTCGATTGGGCATTTGCACTCGAAGGAGCCATCATGTCTGATCGCGACTTGAAGCCGTATTTGCACGAGTCGTCGAGCAGGGAGGGTAAGAGCGGAGAGCATTCTACACTGGTGAAGATGCTGGTGGAGAAGAAAGGCTGTCTGACTCCTGACGAAAGCCAATACCTGATTCTGATTCGCAACAAGGCTGCTCACAACCAATTTCCCTGCGCTGCAGAAATGCCTCTTATTTACCGAGATGTGAGTGCAAAGGTCGGTAGCATTGAGGGATCTTCTGCCAAAGATCTGCCGGAAGGTAGTTCTCTGGTAGATTCATTATGGAAAAAATACGAAATGATAATTCGGAAAATTCTTCCGATTCTCGACCCTGAAAATAGATTTTTTGGAAAGCTTTTGAATAATATGTCTCAACCTATCAATGACTTATAAAGGGTCG # Right flank : TATTATTCCGAAAGGAGAAAGAGGGGAAGTTGTGCTGTTGATGGGGAAGTATTTCTAAATTAGCGATCGCTAAAGTGATGGAAAATGGATAGGGGGATCGTGTTCGGAGGAGAGGGTTGTAGCCGACAGTGTTTGTGTGCAGCTATCCATTCGATCGGGAGGCCTTTCGTTCTCTTCCTTGGCTTTTGTCCGTAAATACCGATTCTTTTAACTCATATAATTGTTTGTTCCTATCAAACGCTCTCATCTCCTTATCAGTGCTGCTTCATCGGGTGGTGGAAAGACTACTTTCACGCTCGGATTGCTACGATTGCTTCGAAGACGCGGTCTCAAAGTGCAGCCTTTCAAATGCGGTCCCGACTATATCGATCCTAAGTATCACCGCCTTGCATGCGGAACGGAAACGGTGAATCTGGATGCTTTCATGATGAGCCGGGAGCATATCGCCGGACTCTATGATCGCTATGGCTGCGAAGCCGATGTTTCCATCGTAGAGGGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGGAATACCCTTAGTTAGAAGGGTGGAGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1813219-1813518 **** Predicted by CRISPRDetect 2.4 *** >NC_010729.1 Porphyromonas gingivalis ATCC 33277, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1813219 36 100.0 30 .................................... CGTTACTTCGATGAAGACTACAACGAAACA 1813285 36 100.0 30 .................................... TAATAAGGTAAAATATAGTAATCCTTTGCC 1813351 36 100.0 30 .................................... GTAAAGAAGAAAAAAGATTAATTCCACTTG 1813417 36 100.0 30 .................................... CTACTCGTGCTACACGAGTTAGTAAATGGA 1813483 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 100.0 32 GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC # Left flank : TATATCGTTTTCATTTTGTATATAAATCATTTTTAATTTATATATAAATCGATTGGGATAAATATATAGATTGTAAGCCCGATTTGATATAAATCGGGCAGCTCAAAAGGCCTTTAGGGGAGGTAAATAAAGAGGCACCCACCGAGTTCCTGCAGGAACTCGGTGGGTGCCTCATCTATTTCGAAGGGGTACGAAACGGCTCTCAAGCTCTACCGCTCATACAGCAGGCTTGTATCAGCCATACGCGCCGGCATATAACCACACAGGCCGAACGAAACCGGCCGAATAAGAATGCAGGGAAGAGAGGGATCGGAGCACATATCTATCATTCATTTAGTCGTTTACAAAGTCATTCCATAGAAAGGGAAAGCACTCCCCGGTACAAATTCACCGAAGAGGGGAGCAGCTTGTCCACCTGCAAATGTAGCGAAAAAGCCCAACGAGGAAGAATCCCCACACTACTGCACATTCCAACGTCCAAGCCACCAATCAAGAATCAT # Right flank : CCTACCCCCATCGAATTTGAAACCGATTGAGAAGTCATCATTCCACAGAAAGTGAGTGACGGTAAGGCTTTGGAGCCACTGCAAGCCGGCGAAAAACAGTCTGTCATCATCATTTTAGTGGGATATTAGGATTGAAAAAATGACTCTCTACGGTCGGGTTTATGCTATTTTCTCTCAAAAAATCATTCCTATGCTCCTGGCGGTTCGCACTCAAAAGTTCAACGTTCGCTTCTTCAGTGCGATGGCTTCTCTAACGGTTTGGGTAAGCTCCTGATGAATGCTGATCATCCGTTCGGCCGTTTCGGGCTTGTTTATCACAACCCTCTCATCCGAGTTCTGCCTCTCCGAAAGCAAAAGGCCGTAAACGATACTTCTATACTCAAAGATACGGGAAATAATCTCTTTAGACAAGAAAATACCGTTCCCATTCTTATAAAATTCGTCCGTCAGTTCGGACAGGAATCCACGGATGCAGGCCGGCCTGAAATAATAGGTTTTCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTGTACCCTTCGAATAGAGGGTAGATCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 2181484-2189363 **** Predicted by CRISPRDetect 2.4 *** >NC_010729.1 Porphyromonas gingivalis ATCC 33277, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2181484 30 100.0 36 .............................. AAACGAAATGAAAAAGACAACAAACAGAAGACCCTC 2181550 30 100.0 36 .............................. GTGCCAGCTGCAGGGGGATGACATAGCCATTGACGA 2181616 30 100.0 36 .............................. GTGCCAGCTGCAGGGGGATGACATAGCCATTGACGA 2181682 30 100.0 36 .............................. TCCGCGCCGCGAGGTGGAGACCCTGCCGGAGGCGAA 2181748 30 100.0 37 .............................. CCTGAGAAAGAGGGGAGGGAGGAGCGATAGACGAAGT 2181815 30 100.0 36 .............................. CGAGAATCTATTGAGTAGCGAAGTCGTCACAAAGAT 2181881 30 100.0 36 .............................. AGCCATAGCTCTTCAATTTCAATTTCTTCTTTTAAT 2181947 30 100.0 36 .............................. CGAAAATAACAAAAATAGATATATTTATAAAAAAGA 2182013 30 100.0 34 .............................. ACTCTTATCATCTACTATCTCAAAAGCTCTTTTT 2182077 30 100.0 38 .............................. TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA 2182145 30 100.0 36 .............................. GAAACATTCGAGCCGTATTCAATTACGCCATCAATG 2182211 30 100.0 38 .............................. CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA 2182279 30 100.0 38 .............................. TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA 2182347 30 100.0 36 .............................. GAAACATTCGAGCCGTATTCAATTACGCCATCAATG 2182413 30 100.0 38 .............................. CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA 2182481 30 100.0 38 .............................. TCGCTATAACCCTATGTGATTCAGGAATCGGCTTGCTA 2182549 30 100.0 36 .............................. GAAACATTCGAGCCGTATTCAATTACGCCATCAATG 2182615 30 100.0 38 .............................. CACCCATTGTGCCGCCGTCCTGACCGAAAACTTCTTTA 2182683 30 100.0 36 .............................. ATTTCTTCATCTCGCGCTTGCTCAAAAGCGCGTTCA 2182749 30 100.0 34 .............................. TGCATCAAGTCACGAACTTTCTGCGAGATGGAAA 2182813 30 100.0 36 .............................. CCGTCTCGAAAAAATATCGGGACGTTTTTGTTTTCT 2182879 30 100.0 35 .............................. CTCCTTCACTTTGTCGACAATGTGCACTGTATTTG 2182944 30 100.0 36 .............................. AGGCGGAGTATCTCTTTGCCACCCAGTCCGCGCGCA 2183010 30 100.0 36 .............................. CGTAACCGCCTCGGTAGACCGCTCCGCACGGTCGTT 2183076 30 100.0 37 .............................. GTGCATTCCGGACAGCTTTCGCTTAAAAAGTTAGCGG 2183143 30 100.0 37 .............................. AAGAACGAACGCCTGCGCGATAAGCACCGCGAGCGTA 2183210 30 100.0 36 .............................. ATTTACCTGCAGACTTGTGCCCACCCACTTGATAGA 2183276 30 100.0 36 .............................. TGGTCACGGAGCGATACCATGAGTGTTTAGTAGATG 2183342 30 100.0 36 .............................. CGGAGGAGATCAGCTATGCGGATGATACCACCCGTG 2183408 30 100.0 36 .............................. TCAGAAAACTCGCGTCCATCTGATAGATGTACACGA 2183474 30 100.0 36 .............................. TAAACGATCGAGGCGCGGAGACCCTCCTTGCCAGTA 2183540 30 100.0 37 .............................. CCGTTCAGGAAAAAGTAACCGAGCTGAAGACCATGCT 2183607 30 100.0 35 .............................. AGGTGCTATCGCAGGACTGCAGGACATCCTCAATC 2183672 30 100.0 36 .............................. AGCCGCTCGACTTGACGCCATGCAAAAACAGATAGA 2183738 30 100.0 36 .............................. TCTGCGAGTTGTGAGAGGCAATAAACTGCTGGGAGC 2183804 30 100.0 35 .............................. ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA 2183869 30 100.0 35 .............................. TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG 2183934 30 100.0 37 .............................. GGGAAGCTGCTTTGCTCGCTGAGATAGCAGCACTTCA 2184001 30 100.0 36 .............................. TTTATTGACGCCACCCCGCCGACGAAAAAAAATCAT 2184067 30 100.0 36 .............................. TTTCGGTCTTTACGTTTGTCGCCACGGATACATGCT 2184133 30 100.0 37 .............................. ATTGTAAATAAATTACATGGCTATTGAAAAACAAATT 2184200 30 100.0 36 .............................. GATTGTACGACTTTGCTATAAAGTCTGAGTTATTAA 2184266 30 100.0 36 .............................. TATCAACAATCACCGTCATATGTGTAATATACTTGA 2184332 30 100.0 36 .............................. GGGCAGGCGTATTGCCCCACTTCTCCCCGAATGCAT 2184398 30 100.0 36 .............................. TGAGGAATCATATCAGTGTTTATTTTTTCATCGATT 2184464 30 100.0 36 .............................. TGGAAGTGGGTAGAAGAAAGCCCCAACGTGTTTAAG 2184530 30 100.0 36 .............................. CATGACAAAGAGACGGTTATCGGTAGAGGACAGGCA 2184596 30 100.0 35 .............................. CGCGTGGAAGGGGCATGTACACTTGTAGTTCGCCC 2184661 30 100.0 34 .............................. TGACAGGCCCTGCAGCGTGTGAGAGCGGAAATGC 2184725 30 100.0 37 .............................. ATTTTCAATCATGATATTTTATTTTTCCTGCAAACGC 2184792 30 100.0 36 .............................. TCGCATGTGGGAGCGCGGCGGTCTCTGCTTTACGAA 2184858 30 100.0 36 .............................. TCAGCGTGATGAGCGCTTGAGGCTCCTCCATCGAGT 2184924 30 100.0 36 .............................. AAGGATGATTTGGAAAATTTAGTAAGATAGTTGATA 2184990 30 100.0 37 .............................. TTCTTGGAGAAAGCGAAGACCATGAACCTAAGCGTCG 2185057 30 100.0 36 .............................. GGAAATATAGTTATTGTATCTACTAAAAGACATAGT 2185123 30 100.0 34 .............................. ACCCCATCTTGCAGAGTATATGCGAGCAAAATTT 2185187 30 100.0 34 .............................. TAGTTAGCACAGTTGCTACTATCGTAGTAGCTGT 2185251 30 100.0 35 .............................. AGATAAACTTTCTTCTCGAATTAAGAAAATCGAGA 2185316 30 100.0 36 .............................. CCGCGGCCATCGAGGCCACCGCCTCCGTCCTCCGCG 2185382 30 100.0 37 .............................. TATGAAAACAGAAAAGAACTTCTCAGCCCTGAGTTTG 2185449 30 100.0 37 .............................. CAAACTCAATGATTATCTGTCAAGAAGCAAGAAACGA 2185516 30 100.0 37 .............................. AGTAAAAATTACCCTAGATGCCGAAACGGACGGCCTT 2185583 30 100.0 36 .............................. CAGAATTTGCACGAACAGTATGATGTTCGTGTTCTT 2185649 30 100.0 36 .............................. AAGCGCGAGACAGGCCGAGCCGGCACAGCTTAGTGC 2185715 30 100.0 36 .............................. AAAACGGCGATAAAATAGCGTTCGAGATTTTCCGCA 2185781 30 100.0 37 .............................. TAGTTGTAGCGATTGTCTCAGTTGCATTACTCCTTAC 2185848 30 100.0 37 .............................. AAATAACGAGAAAAAGAATGCTTAAATTGTTCTTCGT 2185915 30 100.0 36 .............................. AGAAGAGGGTAAACTATTTGCTAATCTTGAATGCTT 2185981 30 100.0 36 .............................. TCTCAATATCTTTCATAGCTACTAAAAATTTACGAA 2186047 30 100.0 35 .............................. ATTGCTGTTAATTCTGTCATCTCTTATTTCTTTTA 2186112 30 100.0 35 .............................. TCTATCTGCGTATAGCCCTCGCCGTCCACGCCCTG 2186177 30 100.0 36 .............................. TGCCCCCTCACCCATCTAACCTCGAGCCGTTGAGCC 2186243 30 100.0 36 .............................. GATTACATAATGATAGACGACAGAGATTGTGCAGAA 2186309 30 100.0 35 .............................. GTACTGATAATTACGCTGCAAGGTCAGACGGTGAT 2186374 30 100.0 36 .............................. TTGCCAGGGCTTGCTGATGCGCGCGCTCCAGCTGCT 2186440 30 100.0 36 .............................. ACAGAACCAGCTCCGTCAAATCTCCCGCTTTTTGTC 2186506 30 100.0 36 .............................. TGCCCCCTCACCCATCTAATCTCGAGCCGCTGAGCC 2186572 30 100.0 36 .............................. TATTCATTCGCTCAAGCGAGGGCATCCTGCTGCAGC 2186638 30 100.0 36 .............................. GCTCGCGGAGGGAGAGGGTGCCGGTATCCTGCCTCC 2186704 30 100.0 36 .............................. AGAGTCTGTATGTGAAAGTGTAGTTCGAAACATTAT 2186770 30 100.0 34 .............................. AGAATACTTTGAAGTTGTATTCAATTACTTTGAA 2186834 30 100.0 36 .............................. CCGTTGTGACAGAGCTGCGCCGTCGTGGCTATGATG 2186900 30 100.0 36 .............................. TGAAAGCCCGAAGATAATCTACACGCAAGATTGTTA 2186966 30 100.0 35 .............................. CGTCATCAGGTGGATATTCTTACTGCTATCCACGA 2187031 30 100.0 36 .............................. TCGTCTGCGACGTATCGCAGCTCTGCCAGCTCCGCG 2187097 30 100.0 36 .............................. GCATCTTCGCAGGAAAGAAGAAGGCTCCGTCCTCGA 2187163 30 100.0 36 .............................. AACAGTCAAGGGGGAGCCGACCTCTCCGGCGGATTT 2187229 30 100.0 36 .............................. GCAGTGCGGCCGACAAGGCTAACCTCGCTCAGCTGA 2187295 30 96.7 36 .........T.................... AATCCATGTTCATGAGGAGAGGATACGAGTTCTATT 2187361 30 100.0 35 .............................. CCTTTTGCTATTGCAGCAAACATATACAATAATAA 2187426 30 100.0 36 .............................. ACTTCATGGATTTAGCGAGATACTCATTATAATTAA 2187492 30 100.0 36 .............................. TCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA 2187558 30 100.0 37 .............................. ATCTTCAAAGATAGTTGTTATCAAATATCGCGCTGAA 2187625 30 100.0 36 .............................. GCTCAAGCGTCCAAGAAAGTTCAAGAAATTGTACTA 2187691 30 100.0 37 .............................. TACTATGGTGTCTGCATTTGAGATACGCAAATAGCAA 2187758 30 100.0 36 .............................. CCTCAATATCTTTCATTGCGACGAGAAATTTGCGAA 2187824 30 100.0 36 .............................. AATCTATGATGATATAGAAGAAGACGACTTGTTGTT 2187890 30 100.0 36 .............................. ATTAATGATTTTCTGAAATAAAGAAGCAGTTGCATA 2187956 30 100.0 35 .............................. CTCAATATCTTTCATTGCGACGAGGAACTTGCGAA 2188021 30 100.0 36 .............................. CCCCGTGGTAACTCATACCACCGACTATTCCACCGT 2188087 30 100.0 36 .............................. TTTGAGTAATCATCGAATAATTATCGATTAATCATT 2188153 30 100.0 36 .............................. TTATATGCATCATATTCTTAAAGTATTTTATTTGAA 2188219 30 100.0 36 .............................. GACGAATACGGCGTTCATCATCGATAGTCGCGATGC 2188285 30 100.0 36 .............................. CGGGCGGCCAACCGGTCACAACAAGAATAGACCGAT 2188351 30 100.0 35 .............................. TTCCTTCCAGTCGCAGCTTAAGATACTGCGACTAC 2188416 30 100.0 36 .............................. AATTTTCATCAGAGCATAAAAAAGGGCAAACTTTTT 2188482 30 100.0 35 .............................. GATACGAGCACCAAGGCTGCGATACCGATTGCGTA 2188547 30 100.0 36 .............................. CCTCGAGCAGATCTTCCTGCTCTTTGATGAGTGAGG 2188613 30 100.0 35 .............................. GCAGGTTGATTATAATGTTGAAGATGCTTTAAGGG 2188678 30 100.0 36 .............................. CTCGTATCGACTTTCAAGCAGGCTGGAGTGCAGCCT 2188744 30 100.0 37 .............................. AATATGAGATCGGAAACAATTATAGTTGCGTCGATAT 2188811 30 100.0 37 .............................. TCACAATAACCGACAAAATGTCTCGCGTAACGTACAA 2188878 30 100.0 35 .............................. GTCGCCTGTTTTCTTGAACTCCTCACTGATTCGTA 2188943 30 100.0 35 .............................. GATGGTGTCGACATCATACGACAATAGATCGTCGA 2189008 30 100.0 35 .............................. GATGGTGTCGACATCATACGACAATAGATCGTCGA 2189073 30 100.0 36 .............................. AATATTTTTTCAAAAATTGTAAAACTTATTAAGTCA 2189139 30 100.0 36 .............................. AAGTTGCTGATTGTCTTAGAATGAAAGGTTATGCTC 2189205 30 100.0 35 .............................. ATAATATTACATAATGGCACACTGATGGTAAACTT 2189270 30 100.0 34 .............................. CATGATGTACAAATATATCATGATCGTATACTAC 2189334 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 120 30 100.0 36 GTTTTAATTCCTGTATGGTGCAATTGAAAT # Left flank : TAGTTTGTCCATGAGCCCCAACTCTGTCAGTGCCGAACGAAATCGACTGATGGTGCTGTGGTCGGGAGATACCTCTTCCATCTTCAGCCCCAAGAATCGGGAAAAGGTGATTGAATCATTGATGCGCTCCTCCAAAGCACAATCACTGAGGTTGTACCATGTCTCCAAAAGCAACATCTTGAATAAGAGAATCACGTCATAAGCCGGGGCGCCGATGGCATTTTGTCGCTTCGTGTATTTCTTGTTGATCAGCGTCCTGATCGGACGCCAATCGATAAGCGTGTCAACCTGATTGAGGAAGTCGTTTTGTGCTTTGCGATAACGCTTTGAAAGGAGTGCGTCTGCAAATGTTACATGCTCATCGGTATTCTTGGATTGGTATGCCATGGGAGGAATATTATGCTGTTTTTAATACTCAAATATACAAAACAACTCCCTATTATACAATGAATTAACAAACAAAATACACACCAATCGCCGTGCAAAGGTCTCCATATATC # Right flank : TCCGTTACAAATATAGGCTTTTCTGTTTGAATGTGAGGAGTTTACGAGAAGGTGAAACCCAAAATTCAGACATTCATAGTTGTCGATGTCTGATTCTATGAAAAACCAAGGGGTGTGACGACTGATATATTTTATTGATTATCAATCATTTCAAAGATCGCCGGAGGTTAATCATAACAAAAGGCTTGATGAATTTGCTCGAATCGACGCTTCAAAAGATAGATAGCGGGAGCTGTATCGTGCTGTATTATAGAAATATATCCGTTGCAGAACGCTCTTTGCCAATTATTTCTTTTTCCAACCAACGTTCTTGTCTGGAAGAAAATATGATCAGACTATCTTCTTCTTTTTCCATAATTCTGGCTGCTCTACTCTTCAGCTCTAAGAGCTTGACTTCCGATATTTCCCCCTCGAACACAGAGTTCTGAATCCAATTCAGATATTTTCTGCACAGTTTTAGCATTTTGCCAACACGCTTTTCCCCGATATCGTACACTAAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTCCTGTATGGTGCAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //