Array 1 46606-47973 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUDH01000027.1 Klebsiella pneumoniae strain 164D7 contig_00027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 46606 29 100.0 32 ............................. CATTTCATAGTGATTCGACTATTTAATTAACA 46667 29 100.0 32 ............................. AGTTCACGACAGGCAAAGTCTTTACGGTATGC 46728 29 100.0 32 ............................. TCTGCTGGTTACAGGAGAAAAAAATGATTGGT 46789 29 100.0 32 ............................. TTATTTCTAAACTAAGTTTTGTTTCATGCAGT 46850 29 100.0 32 ............................. TTTTTTTGACGAAGACGGCAACGAGTTAGAAG 46911 29 100.0 32 ............................. GTCTCTGCCAGTTTTACCTGCTCAGCGGATAA 46972 29 100.0 32 ............................. TATTTTTGAGATGATGGATTGTTGCACACCAG 47033 29 100.0 32 ............................. CGCTTCTCGGCTTCTCTGAATTTATCCGCCCA 47094 29 100.0 32 ............................. ATCCCGACCCGCTCCTCCAGAGCGAATACGAT 47155 29 100.0 32 ............................. TGCTTTATGGCAAATAAGAGAGGATATAACCA 47216 29 100.0 32 ............................. GCGTCCGCCTCCCAAATAGCCAGGCTGTTATT 47277 29 100.0 32 ............................. TAAATCCCAGCTGGTTTGACGTAGTGGCACTG 47338 29 100.0 32 ............................. CAATGAAGGCTTATAAGGGTGAAGAGAGCAGG 47399 29 100.0 32 ............................. CAGTCGGTAACGGCTGGGCGTGACCTCAAAGC 47460 29 100.0 32 ............................. GTGCCATTTTTATTTTGCTTAAAATAAATATC 47521 29 100.0 32 ............................. CCTATTGTGTTCAGTCGTAACAGCTGAATCAG 47582 29 100.0 32 ............................. GGCGCGGCGGAATAACCACTTTATGAGCAGGT 47643 29 100.0 32 ............................. GCGACCATGCCGTAGTCTTCAATGACGTAATC 47704 29 100.0 32 ............................. CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 47765 29 96.6 32 .....A....................... TAACAGGGCCATTTTCCCGGGTTGCCAGACGA 47826 29 100.0 32 ............................. TCACCCTCGTAGCCGATACCACTTTCGCGCAG 47887 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 47945 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 23 29 98.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTTAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGTACCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //