Array 1 24117-21889 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNVV01000001.1 Klebsiella grimontii strain 804720-15 804720-15_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 24116 29 100.0 32 ............................. GTTATGGCCGGTACCGACGAACAGCAAACCGT 24055 29 100.0 32 ............................. TGATAATTATACGTCTAATGAGCCATAAACAG 23994 29 100.0 32 ............................. GTGCGCAATGCGATTCCATCCTCGACCATCTG 23933 29 100.0 32 ............................. GTACCTGGAGACAAAAACGCGGCGTCGCCCCG 23872 29 100.0 33 ............................. GCCGAAACGGGGTCGTTGTACGGTAGCTCCGAC 23810 29 100.0 32 ............................. TGACCGCTACCCTTTTTGAAATAGCGCACGGT 23749 29 100.0 32 ............................. CATGAGCTGGGCGAGCTGCCGGTGATCAACGT 23688 29 100.0 32 ............................. CCTTCACGTCGGCGCTCCCCTTCTGCATTACG 23627 29 100.0 32 ............................. GTGACACGGTCGCCAAAATCACCGGCGTTTAT 23566 29 100.0 32 ............................. TGAATTTTTCCTTTCCGAACGGCATCTGCGGT 23505 29 100.0 32 ............................. TCTGTTTGTCTAAGCACGATCGTCCCTCGCAT 23444 29 100.0 32 ............................. AAGGGGAAGAAGTCACCGCTGACGGTGCCGGT 23383 29 100.0 32 ............................. ATTACGCCGCGCGTTCAGCCGCATGGTTTTAT 23322 29 100.0 32 ............................. TTGACTCCTGCGCCAGGTCGGGGCGCTGCCGT 23261 29 100.0 32 ............................. TTACCGCAAACGCGGCGCATAGCTTGATCACG 23200 29 100.0 32 ............................. CCGATCAAAGTCAAAACCGGGATCGTGATGCC 23139 29 100.0 32 ............................. CATCGCCCCGAGCTTATCCCGGCATATCGTGA 23078 29 100.0 32 ............................. GCACTGAGGACAGAGGCGTGTAGTGTCAGAAT 23017 29 100.0 32 ............................. ACCATAGAACCAAAATCAACCTCAGGGTCAGC 22956 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 22895 29 100.0 32 ............................. ACCACGAATGAAAATGTGGCCAGGAAAGCCGA 22834 29 100.0 33 ............................. GTTGGCCAGGCATACGCAGCAAATGCCATTGCG 22772 29 100.0 32 ............................. ACTTGTTCAGAAAAAACCCCATTAGGAGGTTA 22711 29 100.0 32 ............................. GGTGCTTGCCTGGGTAAAACTGAACAGGCTTA 22650 29 100.0 32 ............................. ACCATTCTCATCATTCACGGCACGCAGTTAGT 22589 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 22528 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 22467 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 22406 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 22345 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 22284 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 22223 29 100.0 32 ............................. GGTACTGCCCTGCACTGTCTGCTGCTGGAGCC 22162 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 22101 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 22040 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 21979 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 21917 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 37 29 99.4 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 109186-110191 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNVV01000010.1 Klebsiella grimontii strain 804720-15 804720-15_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 109186 29 100.0 32 ............................. ATAATAAATGCCCGGCAGCGGGTCGCCGTTGC 109247 29 100.0 32 ............................. CCTCATGTGTCGGGTACAGCTCGCCGATGCGG 109308 29 100.0 32 ............................. GTTATGGCCGGTACCGACGAACAGCAAACCGT 109369 29 100.0 32 ............................. CGTATAGACGTACAGCAGCGCAGCCAGCGCGA 109430 29 100.0 32 ............................. TCTGGGACAACCTCGGCATCTGGTGCTGGCTC 109491 29 100.0 32 ............................. CTTGGCGATCCTGTTCGTGAGGTATTCGGAAG 109552 29 100.0 32 ............................. ATTGACCAGGCTTCCGCTGACCGACTGTTGAA 109613 29 100.0 32 ............................. GCACTGACACACGAGGAGCTTTGCCAGTTAGC 109674 29 100.0 32 ............................. ACTCCCTTCTTGCCTGCTTCCACTGCTCTGAT 109735 29 100.0 32 ............................. AACGGGCGCAGATATCCATAGGTCCACGTAGC 109796 29 96.6 32 .........A................... TTACTGGAGATCTGATGCACTTGCGTTCAAAT 109857 29 100.0 32 ............................. AAGATCAACCCGCGGATGAACACATTGATGCC 109918 29 100.0 33 ............................. GCCAGTGAACAGCCTGGCGCTGTGGCTGAATAA 109980 29 100.0 32 ............................. CCGGTACCGCGCACGTCAAATACTGAAGATGG 110041 29 100.0 32 ............................. CCTATGAAGTCAGCAACCTCGGACGGGTCCGC 110102 29 100.0 32 ............................. GCGGTGAACTCAGTTGCAAGTGGGCAGGGTGA 110163 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================= ================== 17 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCAAACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGTTCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //