Array 1 287427-286409 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKKZ01000002.1 Halosegnis rubeus strain F18-79 NODE_2_length_520506_cov_7.457305, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 287426 30 100.0 36 .............................. GTGCTGAACTGTAGCTGCCCACGGTCGTCGCCTCTG 287360 30 100.0 36 .............................. GGCGGCAGAGACGCGGAGCGCGGCGTTGAATCGTGG 287294 30 100.0 37 .............................. TACCTCGCGGGCGAGGGTGACCTTGCCGCGCCGACCG 287227 30 100.0 36 .............................. GACTCCCGCGCAGAGTCGTGAGGTGCAGCAACCATG 287161 30 100.0 36 .............................. AGCTCCCGGCCAACGTCGCCATCGCGCTCGCGAGTC 287095 30 96.7 36 ..........................G... CTCAAACACCCGATAACGATTGCGAGCGGCGTGTTC 287029 30 100.0 36 .............................. GGATGTTGTAGGTCGTGCCGCGTGTCTCCTGAAACG 286963 30 100.0 34 .............................. GACCCCGAGCGACCGCCGAGCGAGGGCGGGAAGG 286899 30 100.0 38 .............................. GCAAACGCCACCGCGTCGGCGTGGTCGTCATGGCCGCC 286831 30 100.0 35 .............................. GCCCTCCTCGAGCATCTCGGGACCACTACACCAGT 286766 30 100.0 33 .............................. AACTGTTGTACGGCGCGAAGATGACGCGGCCGT 286703 30 100.0 38 .............................. ACGCCCTGTCCGTCGTCTGTGTGGTCCATCGCCCGCTG 286635 30 100.0 35 .............................. AATCACCCACCGGAAATCGCCGTAATCATGCAACG 286570 30 100.0 35 .............................. AGCATCATCCATATTCGCCCACTCCGGCGGCGAGT 286505 30 100.0 37 .............................. ATTGTACTGGCTGGAATCAACCCTGTGCTTGCCGAGA 286438 30 96.7 0 .........................A.... | ========== ====== ====== ====== ============================== ====================================== ================== 16 30 99.6 36 GTTACAGACGAACCCTTGTGGGATTGAAGC # Left flank : GAATCCCCCCTTCGTCGCCAGCAGTATCGCCTCGCGGGCTACGTCGCTGTCGGCGACGGCGCGGCCGACGACGCGCTCGGAGCGCTGGTGGCGGTAGTTGATGGCCGTGTCGATGACGTTGACACCCGTCGCCAGCGCCTCGCGGATGGCGGTGTAGTAGGCATCGTCGCGCTCGTCGGTCGCGTCGCCGAGGTAGGTACCGACGCCGACCGACGAGACGAGCCCGTCACCGAACCGGCGGAAGTAGGTGCGGGCGAATGACTCGTGGAACTCGTTGCGGTATGCCCACGACGCGTCGCGGTTCATACCCAGCGTTCGGGACGACGGAGGCTAACGGTTCCGCTCTCGCAACCGTTCGGCCGTTCGAACTGAGGCTCGTTCGATGGTCGGTCGACGGCAGATTTCATCGACCTCCGGGGGTTCTGGGGGTATTGAGGGTCGACGGAAACACTAAGTCCCGAACACCAGTATAGCGGCGTGAGTGCCACGAATTGGGCACG # Right flank : GGGCCACTCATGACAATTTTGTCGACGCTGCACTTGTTACAGAAAGGAGGGCCGATAGCGACTACGTCGATTCCTGCCGGTACGCCTCTACCGCTGTGGCGTACCCCTCCCGATACGTCGGATACGTCAGTTCGTACCCCACTTCGTGGAGCAGGTCGTTGCTGACGCGCTTACTCGTGAGAATCCGGCGTTGGGCCGGCTCCGAGAGGTCGCCCGCGTCGAGTCGCTCCTGTTTCGTCCGTTTCTCGGGGCGCGATACGTCACACGCGTCGGCGAGCCAGTCGGCGAACGCGTGTTTCGAGGCCGGTTCGTCGTCGGCGACGTTGACGACCGACGGTTCGACGCCGGCGAGCAGATGCGCGACCGCACCGGCTGCGTCGTCGCGGTGAACCATATTCAGATAGCCGGCTGTCACCGGCCCCTCCAGATAGCGGTCGAGGCGATAGCGGTCCGGGCCGTACAGTCCGGCGAATCTGGCTACGGTTCCGTCGATACCGCGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGACGAACCCTTGTGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.20,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 100410-100823 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKKZ01000003.1 Halosegnis rubeus strain F18-79 NODE_3_length_309021_cov_6.965396, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 100410 30 100.0 36 .............................. CGATATTCTCGAAGAGGGGCCGCCTGGGAGCGGTGA 100476 30 96.7 33 .......G...................... CCGTGCTCGCGTGCCCACTTGACGACCGGCCGG 100539 30 100.0 35 .............................. CGTAAGCCGATGACGGCCGCCGAGCGACGTGTCGC 100604 30 100.0 34 .............................. AGAAATGGATATTACACACCTAACCCGTGGCCCA 100668 30 100.0 33 .............................. GCTGCGTCGGTCAGCGTCATGTAGCTGTGAACT 100731 30 100.0 33 .............................. GCTGTCGTTGTGACAGTCGCGGCTCTCGCGGCT 100794 30 93.3 0 ......................G.....A. | ========== ====== ====== ====== ============================== ==================================== ================== 7 30 98.6 34 GTTACAGACGAACCCTTGTGGGATTGAAGC # Left flank : ATTCCTCGATGTCGCCGACGAGAAGACCGAGCGGGTCTGCACGGAGAAACTCGGGTACCTAGCGGAAAGTCCGTACCCGGGCCGTGGTCGTGGGGACAAAGAAAAGCTCCCCATCGATGGCCGGCGCGACCGGTACCGGCTGCACGTCTCTCGGACCTACACGGCTATCTACACCGTCTTGGAGGACGAGAACGAGGTGCGCGTGCTGGAGATTGTCTCCATCGATCAGGCGCACAAGCGGTACGGATTTTAGATAACAGGTAGTCGACTCTGTTGAAATCCTATTGATCAGACACTATCTGCGGTGAAATTGACCAGTACAATGTCGGGGAGACAACCACGGCCTATGTCGTGCAAGGCTCGCCCTCGAAATCATATCTTAAGATAAAGTAGCCCTCTACTACTTATATTCGGCATCTTAGGCCTATTCCTGATCGGAAGACCAGTCTTGTGGGATTGAAGCGGAACGGTTCGACCATTCTGGGTGATTCTCGCCGATT # Right flank : CAGGATCGACTTGGCAGACAACCAGATACGTACCGACAAAATCGCTCCCGCGCGTCCCACCGACGGCCGGGAGTAATCCACCAAATCGCCAAACAGCGTTCAGACACCCTCGATGCCACCCATTGACCGTAGCTGATTTTCACTCAGCGCCTCGTGGAACTGGCTAACGACGACACAAGCCTCCGTCGCTTCTGCCCCCCCTCTCCCTCTCTCAGCCCCCGCTCGATCATGACATGGCTCCAAGACGGAGCAGTGCCTGCGAGAAACGAACCAGCCACAGCGGTGAGGAGGAAGCCAAGGTTGAGAACCCTGGCATAAATCAACAACACCCATGCCGTTTGGCTCTGGCTCAGTAAGGCACTGACACTCCCGTCGATTGCCACGGCATCGGCGTCGAAGTCGGTCGCAAGTCGGGCAAACAACGTCCAATCACTCGGCCCCACCCGGCTGAGACAGGCGATCATCAATGCCACCGCTGTGGCCAGCGTCGCCAAAGCGAC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGACGAACCCTTGTGGGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGATTGAAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.20,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //