Array 1 42810-43246 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI271175.1 Eubacterium ramulus ATCC 29099 Scaffold685, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== =========================================== ================== 42810 26 100.0 43 .......................... GCTGTCGTATACCAGTCCTGTGTAACCGAAGTTGATCGCACCG 42879 26 100.0 43 .......................... ACTGTCGTATACCAGTCCTGTGTAACCGAAGTTGATCGCACTG 42948 26 96.2 43 .....................T.... GCTGTCATATACCAGTCCTGTGCGTACAAATGTGATCGTGCTG 43017 25 88.5 41 .....C...............T.-.. CGTTTGCTGTCAGCCCTGTGAACGCAAATGTGATGGTTCCA 43083 26 100.0 43 .......................... CTTGTCATTGTACAGACCTGTGTAGCCAAAATTGATATTGCCA 43152 26 96.2 43 .....................T.... GCTGTCATATACCAGTCCTGTGTAGCCATAGTCGATGGTTCCA 43221 26 73.1 0 CCAA.................T.C.C | ========== ====== ====== ====== ========================== =========================================== ================== 7 26 93.4 43 TTCTCTACATACCACCAGCCACAGTT # Left flank : GTTCTGCCTGATTGGCGGAATCACCTGCATTAATATTTGCATTTTCGATATTCGCCAGCTGATCCATGTCCATATCCAGCGTAGAGGAAAGCAGATACATCCGTGATGCATCCGCACGGTTCCTGTCCATGGGATTTTCCGGGGCTGTCTTTCCAAAAGAAATCATCAGCGCCAGAACCAGAGCCACAATTCCGGCTCCCGCCAGTGCTCCTCTTATTTTCTTTTTATTTTTTCTGTTTCTACTTCCCGGTCTGTTCATGAAATTCCCCTGTTTTTTTGACAAAAGCAGGTTTGTTCCGGTTGCAAAGTCCGAAACAAACCTGTTTTTTACTTCCTTGTGTCCATCTAAATGATGTGTATGCAATAATTGTCAGATAATTATTCGCAATCTGCCCACGCTACTTGCTTATTCACGTTAGAATCTGACTGCTCCTCCAACTACATTCCATACACCGTATGCATTTCTTACAGTTCCTGTATACCCAAAGTTGATGGCACCG # Right flank : CACACTCAGCGAGCCCTGTATAATCAAAATCTACCGCACCGTCTTTGATGTACCACCAGCCGCATACACTGTCATTGTACAGACCTGTGTACTCAGCATCTACTTTACCGGCTTTGACATAACGCCATCCGTAAACAGCATCATTGTAAAGTCCGTTATAAGTAGTATCTACTTCGCCTTCTTTTACATAGTAGATACCGTCTTCTCTCTCCTGAAGACCTGTGAACTCTCTTGCTTTGTCTCTGGTTGTTACATGTGCAGTCAGGTCAACCGGAGCTGTGCTCTCATTGCCGTCCGTGAAATACAGACCTTTGATCGCTACTTCTACCGGATCATCTACATATTTTAATACTTTAAATTTTAATGCAAACGTTGCTTCCGAGAAGGTAGTATCTTTTGCAGATGTCAGGTAAGAGAAATTTCCTCCCGCAGTGGATACCATCGCTTTCTCCGGAAGATCTTTTTTCTCAAGTCCCTCAAATTCCAGTACAGTTTCATCG # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTCTACATACCACCAGCCACAGTT # Alternate repeat : TTCTCTACATACCACCAGCCATAGTT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 79540-79771 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI271077.1 Eubacterium ramulus ATCC 29099 Scaffold1153, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ================================ ================== 79540 34 97.1 32 ..G............................... AAAACTAACCATGTAGTAAGTCGTGTCACAGA 79606 34 100.0 32 .................................. AAAACTACATCACGCTTGGTAAAGCGGTTGTG 79672 34 100.0 32 .................................. AAAACAGCCTTGTAAGTCGTAGGTCTGACTTA 79738 34 97.1 0 .C................................ | ========== ====== ====== ====== ================================== ================================ ================== 4 34 98.6 32 TTCGTTTGAGAACCTTGTAAGTTTGTAATGGTGT # Left flank : TCAGTTGGATACAGAAGAAATTGATATGTTTGAACGGCTCTTGGAGTATGTCAAAGTACTGAAATCATTGTGTGGAGTTCGCTTGCTGGTATTTATAAATGTGAAAAATTATTTGTCAGAAATGCAGATAAAAGAATTGTACAAAGCAACATTTTATTATAAAATAAATTTATTATTAGTTGAGGCACATCAAGGGAAAAATTTAGAATGTGAAAAAAATCAATTAATAGATGAAGACATGTGTTTTATACATTACTAGGTGGCTTACGCATATTGACCGATATGTTCGGTTCGGTGATGATCTCATTTGAGGTTTGAGAACCTTGTAAGTTTGTAATGGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAACCTTGTAAGTTTGTAATGGTGTAAAACGTTTTTCTTCCGGAGTTTGACCCATGG # Right flank : TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAACCTTGTAAGTTTGTAATGGTGTAAAACTGTAATAAGCTGTCATGTATGAGCTTACAGTTTGAGAACCTTGTAAGTTTGTAATGGTGTAAAACTTCGACAGCCCAGCGATCAATATTACGCCTGTTTGAGAACCTTGTAAGTTTGTAATGGTGTAAAACGATAATAAAGTGCTTGATACGTTAGTTCCGGTTTGAGAACCTTGTAAGTTTGTAATGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAACCTTGTAAGTTTGTAATGGTGTAAAACAACAACCTTCCCTTCTGCGTCCATTCAGTCGTTTGAGAACCTTGTAAGT # Questionable array : NO Score: 2.79 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGTTTGAGAACCTTGTAAGTTTGTAATGGTGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //