Array 1 187552-184234 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKSI01000004.1 Klebsiella pneumoniae strain EuSCAPE_IT221, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 187551 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 187492 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187431 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187370 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187309 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187248 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 187187 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 187126 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 187065 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 187004 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 186943 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 186882 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 186821 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 186760 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 186699 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 186638 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 186577 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 186516 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 186455 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 186394 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186333 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186272 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186211 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186150 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186089 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 186028 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 185967 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 185906 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 185845 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 185784 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 185723 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 185662 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 185601 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 185540 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 185479 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 185418 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 185357 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185296 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185235 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185174 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 185113 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 185052 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 184991 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 184930 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184869 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184808 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184747 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184686 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184625 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184564 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184503 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184442 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184381 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184320 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184262 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 55 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //