Array 1 14039-11188 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMPT010000204.1 Flavobacterium solisilvae strain SE-s27 1025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 14038 45 91.3 30 TC.A...-...................................... TTGGCACCAAAATTAAGGTGTATGAATTCA 13963 46 100.0 30 .............................................. TTAATATCATAATTAAAACCACCATTGATG 13887 46 100.0 29 .............................................. TCTTCTTAATTTTGATAAAACTTTGCATT 13812 46 100.0 30 .............................................. CGTCATACCACCATTAGCGATGGTATTTCT 13736 46 100.0 30 .............................................. TGAAACTGCTATCACTTTTTTTTGTCATCA 13660 46 100.0 30 .............................................. TTTGGTTGATTAAACAGCATTTGTTGGGTA 13584 46 100.0 30 .............................................. AAAGAAGGCAAACAAGCCATCAGTGATTTC 13508 46 100.0 30 .............................................. TTTAACAAAATGGATGCCTGAGTATTTAGA 13432 46 100.0 30 .............................................. CTATGTTTTTCGATATATCCAACTTCTCCA 13356 46 100.0 30 .............................................. ATCCGTAAAGCCATTTTGTACCGCTATTGC 13280 46 100.0 30 .............................................. TCAAGCATTTGACAACACAATGACAGGTCA 13204 46 100.0 30 .............................................. TTGGCATAAGCTTTGATAACATGCTCCGTA 13128 46 100.0 30 .............................................. CGTAAAAAAATTTACTTCTATTGAGGTTAA 13052 46 100.0 30 .............................................. TTTAAGCGGTGTGTAGTCATTACTGCTAAC 12976 46 100.0 30 .............................................. TGGAGATAATGGAACACACGAAGACGCTAC 12900 46 100.0 30 .............................................. ACGATGGTAATTGAGAATAACAAATAAGTA 12824 46 100.0 30 .............................................. TCAAGCATTTGACAACACAATGACTGGACA 12748 46 100.0 30 .............................................. GCATGGAATGTTTTTGAGAATTCGTCACTA 12672 46 100.0 29 .............................................. AAGCATTCGAAAAATTGAATGCTGCAGAA 12597 46 100.0 30 .............................................. AAGAGATATTGATGGAGAAAACGCAAATAA 12521 46 100.0 29 .............................................. CTAAAAATAAAGCTGTGACTATCTGTAGC 12446 46 100.0 29 .............................................. GTTTTCCGGAACGTTCTAACTTATCGTAT 12371 46 100.0 30 .............................................. TCGCGATCATGCGATATCAGCATTGCTGTT 12295 46 100.0 30 .............................................. TTTTTTCGGTTTCAACACTTTGCTCAATAA 12219 46 100.0 30 .............................................. ATACTCAAAATAAAACCTTCCCATGCGCCA 12143 46 100.0 29 .............................................. TTTAGGTAACAGAGTAGATCTTGACGCTG 12068 46 100.0 30 .............................................. GTGATGGCGAATACTATCAAAGTACAACTA 11992 46 100.0 30 .............................................. AAACCGCTAGTGTTTAACACCATTCAAGGA 11916 46 100.0 30 .............................................. TAATTTCATCAAATAAACTAGGTAAGTTGT 11840 46 100.0 30 .............................................. AAAGCGGATACCATTGGTGGTGTTTAATTA 11764 46 100.0 30 .............................................. AAGGACTTATTGAAAGGTATGAAGTAGCAA 11688 46 100.0 29 .............................................. TTGTCAGGAGTGGGCGATTCACACGATGC 11613 46 100.0 30 .............................................. GCGAGTCGGGTGTTGGTATAGGTAAGAATT 11537 46 100.0 30 .............................................. GATGAAATCGAAGCCGAGCGCATTCGATTA 11461 46 100.0 30 .............................................. TTGTTTGAAAATATATATGTTGGTTTTAAA 11385 46 100.0 30 .............................................. ACGCCAAATTATGACAATCGCTTATGTTAA 11309 46 100.0 30 .............................................. ATCAAATAATTTCGCTTGTCCTTGTTGCTA 11233 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 38 46 99.8 30 GTTGTGAATTGCTTTCAAAATTGTATCTTTACTTATAATTCCCAAC # Left flank : TGCAATAGGCGTTCGAAAAGTTTTTCTTTTTCGTCGTATAACTCAATAAATTTGTCCAAAGGATTGAAATTAGTGTAATTATTAGTAAAGATGTTATTACCACTATTATCTGAAAAAGTATTAAAATAATTGATTACAGATTCTTCTGAGAAATTTTTAATAGCCTCAGAGGTAACGCCTAATGCTTGATCTATCAGTAGAAGCTTATCTTCATCAATAGACTCGCTGTTTTCAATGTTTGAAATGGTTTGTTGGCTCACGCCCATTGCGATAGCTAATACTTCTTGTTTCATGTCACGAAGTTCACGGATGCGGCTGATGTTTCTGCCGATGTGTTTTGGTTTTGATGTTGTATTCACAACCCAAATATAGAAAAAAGTTTTTGATAGGATGTATGCCAATAGGGAAAAAGTGTAGTTAAAAAAGTATATATTTAATTAGTATTTTTGTTTATTATTTGTTATTGCTTAATTTCATTGGATTTTATTTTTACTAGGTAT # Right flank : GTATCAGTGGTTAACTAATTGAAATGTTGGGAGTTGTGAGTGGAGTTAGAAATAGGATTTTGTTTCTGGTTATTGATAGGTTTTCTTTGTGAGAAGGTTTTTTTAATCCTACTGTTGTTTTAAAACAATTCGAGCTGTTGCGAAGGTTTGTCTGTTTCTACTGGTTTTTTTCCATAAAAAAGTTCCATCATTCCAAATTGTTTGTCGGTGATTTGCATTACTCCTATTTTCCCATGTTCTGGTAGGCTGTTTTTGATTCGTTTTGTATGTACTTCGGCATTTTCTCGGCTGGCGCAGAAGCGCATGTATATTGAAAATTGGAACATGCTGAAGCCATCGTCTAATAGTCGCTTTCTAAAAGCGGTTGCTATTTTACGATCCTTTCGGGTTTCGGTTGGTAAATCAAAAAATACTAATATCCACAAACTCCTATATTGATTTAATCGAGTATAATTCTCATCATACATAATTTTATAAACATATTAAATTCAATCCCTCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATCTTTACTTATAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //