Array 1 449770-447423 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIT01000004.1 Fibrisoma limi BUZ 3 strain type strain:BUZ 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 449769 29 100.0 32 ............................. GCCCTGTACACCATGACCGACCTGTACCCCAT 449708 29 100.0 32 ............................. ACTACAGCGAGTTGCAGACCCGCTTTACCCGG 449647 29 100.0 32 ............................. ACAACAAAAGATAGCGGCAAACCTGCGTTTGC 449586 29 100.0 32 ............................. ACGCTCTGACGGCTTAATCAAACGCCCGGGTG 449525 29 100.0 32 ............................. ATCGAACGCAACGCCCTGTCGGTCGTGAAGTT 449464 29 100.0 32 ............................. GTGACAGTCCGCTACAATGCCCTTCAGAATCA 449403 29 100.0 32 ............................. GTGACAGTCCGCTACAATGCCCTTCAGAATCA 449342 29 100.0 32 ............................. GGTGTACTGGAGCAGTGGAGTGCGATCGCCGT 449281 29 100.0 32 ............................. GGTTAGGAAAACTGTGTCGATCTAAAGGGCAT 449220 29 100.0 32 ............................. GTGGAGCAGACCAACCAGGAGCTGGACAAGCA 449159 29 100.0 32 ............................. ATTGAAACGGCATTATCTGGCTTTATTAATGA 449098 29 100.0 32 ............................. TCACGCGGCACCCCATCGCCAAACAGACCACC 449037 29 100.0 32 ............................. GGTACCCATACGGTCGAACGTTTTGGGCTCGC 448976 29 100.0 32 ............................. CCGCGTCGATAACGTGCGGCCTGACCTGCAGG 448915 29 100.0 32 ............................. GAGCGACAGGGAAACAATCCTCTCAATTCACA 448854 29 100.0 32 ............................. CAAAGGTACAGACCAATCAGACCTCACAACTC 448793 29 100.0 32 ............................. AGGTGATCAAACACCTACAGCCGAGCGAGGTT 448732 29 100.0 32 ............................. TCGGCCGGGAAGAAATCTGTACGTGGTTCGGT 448671 29 100.0 32 ............................. CAAATACGTACGTCCGAAAAAGGCTTTATTTA 448610 29 100.0 32 ............................. ACAGACAAGATCGGCGCTTTGCACCCTTGTAC 448549 29 100.0 32 ............................. ACAATCCGTTTGAAAAGCCCGACTGTTCGGAT 448488 29 100.0 32 ............................. ACTCGAAAAAGCTGGTTGAGAACTGGGTTAAG 448427 29 100.0 32 ............................. ATATTCGCAAATTTCAGGACAATCCTATCGTG 448366 29 100.0 32 ............................. ATATATCTACTTATTCTTATCAGGGCATTTTG 448305 29 100.0 32 ............................. TTCTTCTATTAAATTATCGTTTATCGCTACAT 448244 29 100.0 32 ............................. CGGCAGAGAACGGCTCTTCGTTAAGCTCCGAC 448183 29 100.0 32 ............................. AGAGGGCCGAGAAAGATGTGCAAACGCACGGC 448122 29 100.0 32 ............................. GGCGGGCGGGTTGATCTGATTGAAACACCTAT 448061 29 96.6 32 ........T.................... CAACTATGGCACTTTACATTCGCATTCACGAT 448000 29 96.6 32 ........T.................... ACCCCACCTACCCCGAAAGAAGAGGGCCAGTG 447939 29 96.6 32 ........T.................... GCAGCGAAAGAGCGCGAAAAACGGGCCAATGA 447878 29 96.6 32 ........T.................... TCATTTTTGAAATCCCCGAGCTACGGGAGTGC 447817 29 96.6 32 ........T.................... ATGGCCATTACGCTAGGATGGGGTCGTTCAGG 447756 29 96.6 32 ........T.................... TACTTATCGGCCATATCACGTTCCAGCGAGAC 447695 29 96.6 32 ........T.................... GATGGCAACATCATTCTGGAGCAGTGGATCTG 447634 29 96.6 32 ........T.................... TTTGGCAATGAAAGAAAGTAAGGGATTGGTTA 447573 29 93.1 32 ...G....T.................... GGCATTGACAACACGCCAACGCCGGAGCAATA 447512 29 96.6 32 ........T.................... TACACCCGGCCCATATCAAAGTTGCCGCGCTG 447451 29 79.3 0 ....T...T...T...........T.GT. | ========== ====== ====== ====== ============================= ================================ ================== 39 29 98.5 32 ATGACCCCCACGCTCGTGGGGATGAACCG # Left flank : GTTGGCCAGACCTTAGCTTTCCGCTTATTGGCCAACCCGACGAAGAAGGAAAAACGACCTGATCGGCGTCAAGGTCGGCGCATTGCCTTACCAGACTACGCAGAGGAGGATGAGATAACACCAGCTCGTGGGTGGTTGGTCCGTAAGGGGGAGCAAAATGGGTTTCATGTTCTTTACGCCACCACAGAGGCTTTTTGGTTGGGAATGGACCGGGGTAGGGCTACCAAAAACGCGATACCCATCTACGGCGTTCGTTACGATGGGTTATTACAAGTGACCGACCCTGCACTGCTAACCAGCGCTTTGCAATCAGGTATTGGCCCCTCTAAGGCCTTTGGTTTTGGTATGCTGTCACTGGCGAAACCTCAATAAATACCGATACAGTGTTGACAAAGCCGCGCCTTTTACAAGGTCGTGGCTTTGTTGTGTCAATCCGATAACGTGATAGACATAAATGTTCTTTGACATACAAATTGCCCATTTCGGCGTAAATTTCCAGT # Right flank : TTTGACCGGGAAGATAAGGCTGAACCGGTTTGTATCTCCCATAACGTAGACGACTGAGAACACTTTCAATTCATGGTGGTAAAATACGAATCGCTTTCTCAAATGGGGTAGGTTCTATGAAAGCAATTATTTTGAGAGTTTATATCATCGGTAATTGCCAACCGAATTATCGGGCGATGACGAAAGCGGCCAGGTACGCAAGGTGAATCAAACCAATGGTGAAAACCAGATACACGGCGAGCGACGTCCACGGGTACTGCCGATAATTTACTTTCGAGTGGTCCATCTTCCAACTGAAGAACACCAGCGCGGTATAAAACAAAACGATCTTAAACCGGTTTGGCCAATGTTCTCGTGGTGATCGGTAATAACACAAAACACGCGCCTTGGATGCGGTAAGTCCGAGCTGGTCCGATGGGAAGTATGCGTTCATAAATCGTTGGAAACCCAACAGGAATAACAGGAACGATGCCACAAAAGCGTAAAACGTGTTTTGTAAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGACCCCCACGCTCGTGGGGATGAACCG # Alternate repeat : ATGACCCCTACGCTCGTGGGGATGAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA // Array 2 460648-463850 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIT01000004.1 Fibrisoma limi BUZ 3 strain type strain:BUZ 3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 460648 29 100.0 32 ............................. GACAGTTTGTAGGTACAAATAAGCCTTTTGAG 460709 29 100.0 32 ............................. ACGGCGGTAAATTCTTTAAGGTTCTTAACTCC 460770 29 100.0 32 ............................. CCTGGGTGCGACCCGTCCCATGGCGAAAAGAA 460831 29 100.0 32 ............................. ATACCGTCGTTGCCCGCTGGATTCGTAAGGTT 460892 29 100.0 32 ............................. GACAAAGGGGGAGCGGCAGAGGTCGCTAAAAA 460953 29 100.0 32 ............................. ACCGTGGCCAGATTGATCGTTGCCAGCTCAAC 461014 29 100.0 32 ............................. TCGTTGTCATCCCGGCGGAAAACGCCCTCTTT 461075 29 100.0 32 ............................. TGAACTGAACAAGGTCACCGCCTACCACAGTC 461136 29 100.0 32 ............................. AATGAACGGACGGTGCTGAATGCCCTGGGCGA 461197 29 100.0 32 ............................. GCAGTTGAAAAGGACGTACTTTATGCAGAGAG 461258 29 100.0 32 ............................. ATGGCGGCTATGCCAAAATTGACTCCTCAGTA 461319 29 100.0 32 ............................. GTTGTGGTTTTCATGGGGAGGGAGGGGTTAAA 461380 29 100.0 32 ............................. CCCTCTGGGATCAGAAAGGCCAGCGCGTCCGG 461441 29 100.0 32 ............................. ACATTTGCCACCCGCTACTGCCTGAACTGGGG 461502 29 100.0 32 ............................. ACCTCGATACCAAGGAAGGGATTGTCACGGGC 461563 29 100.0 32 ............................. ATTGACGATGTGCTCAGGGAGTTGAACCTAAA 461624 29 100.0 32 ............................. TGATTAGATTCAGTAAAACAATAAGGGAAAAG 461685 29 100.0 32 ............................. TTGTTCGCGCCACCAGTTTGTCGCCAGTGGTG 461746 29 100.0 32 ............................. GAGAAAGTGCCAAAGGCCGTTAAACCCGAAAA 461807 29 100.0 32 ............................. GACCTGCTGCAGGGAACGGCCGACGCCCTGGC 461868 29 100.0 32 ............................. ACCGGGGTATGTTCTTGAATCATGCTCTGATC 461929 29 100.0 32 ............................. CATTAGGAATATAACTTACTACAACTAAACTA 461990 29 100.0 32 ............................. CGGGATTGGGCAGGGAGCCTGACCGTTGACAG 462051 29 100.0 32 ............................. GCCGCTGATAGTCTGGGTGCGCTCAATTCGCT 462112 29 100.0 33 ............................. GTCGGTAGCTGTAGCCGAGTAGTTGCCGGTGAT 462174 29 100.0 32 ............................. ACACGCTTATTTTCAAGACGCCGGGCTTTGGT 462235 29 100.0 32 ............................. AATGGACGGAGTTCGTAAAAGCTGAAAGAGCG 462296 29 100.0 32 ............................. GATCTGGCCACGGTCGACTTGCAGGGCATCGA 462357 29 100.0 32 ............................. TTGGGATTAGTCAATGCTCAACTGACGAGAGA 462418 29 100.0 32 ............................. ACGTTCGGCTGATCCCTAATTCGGATGCTATA 462479 29 100.0 32 ............................. GTTTAGGCGAAAAGCTGGGATTTAAGCGCGTC 462540 29 100.0 32 ............................. GTGGAACCCCTGCAAATCACGTACAAAACGGA 462601 29 100.0 32 ............................. TAAAACAACATTATCAAAATGGCGATTGCATA 462662 29 100.0 32 ............................. GTCGCAGTATTTATTCGTACTGATTACCAAGC 462723 29 100.0 32 ............................. TCAGATAAGCGCGTGCTGATTACCGAGAAGGA 462784 29 96.6 32 ............................T ACATTTTCGGGCTGAACGATGCGAGCCGCGCA 462845 29 100.0 32 ............................. CTGATCCTGCCCGAGGTGAAAGTGACGCCAAA 462906 29 100.0 32 ............................. AAATCGACGCCGAAAAACGGGCGCTGGATGAA 462967 29 100.0 32 ............................. TTAGCCGACGCAACTACGGTTGTACTTCAATT 463028 29 96.6 32 ..................A.......... TTTGGCCTGATTCTTTTTCGTATCGCCTAACA 463089 29 100.0 32 ............................. GCCAGCGTGTCCGGGGCAAGCACCGCGATATA 463150 29 100.0 32 ............................. TTGTCGGCAGCCACCTGTCGGCGTTTCGGCCG 463211 29 100.0 32 ............................. CCCGCCGTAGCAGGTCTGCTCTGAAAGGTCGT 463272 29 100.0 32 ............................. GATACGCTGCGCTCGCCCCGCTACCGGATGGG 463333 29 100.0 32 ............................. GATGCCGCTGCATCAAGTGTAAACCCGCACCG 463394 29 100.0 32 ............................. GAACAACTCGCACGTACAGGGGAAGCGAAATC 463455 29 100.0 32 ............................. ATAGCGTCGTTGTGGTCGTCGTTGGTTCAAAA 463516 29 100.0 32 ............................. GCGGCTGTCCGTGGCGCACTCAACGACCTGAT 463577 29 100.0 32 ............................. GCGCACCCTGAGTTTTGGGAGGCAGTCACGCG 463638 29 100.0 32 ............................. TGATCCGGGCCTGTACGACCACAGACAACAAA 463699 29 100.0 32 ............................. TTTGACGATTTATCCGTGTTTGGCTAATGAGC 463760 29 93.1 32 ...........................TA TCCGTGGATGCACTGACATGGGTCAGGTAGTT 463821 28 86.2 0 ...................A......TT- | GC [463845] Deletion [463849] ========== ====== ====== ====== ============================= ================================= ================== 53 29 99.5 32 GTGTTCCCTACGTACGTGGGGATGAACCG # Left flank : CGAAAGCGTTGCCGTGATGCCTTTACCAACATGCGCTTATTACAGCGCATCGTCCCCGACGTTGATCGGCTGTTACGCTTGGACATTGAACCAGAAAATCCGGATGGTTTTGATCCGGACGAAGATCCTGCGTTACCAACACCTTGGTGGAGTAATCCAAAACAAGACCAACCATGACTGTATTCATCTTGGAAAGGGTATCCCCGTCGCTACGTGGCGATCTAAGTCGATGGCTCGTTGAAGTACAGGCCGGTGTGTTTGTAGGCCGAATCAATGAAGTGGTACGCGACGCATTGTGGGAGCGGGCGACGGACCGGGCGGATGACGGTACTGTCACCATGTTATGGCGTATGAACAATGAGCAAGGGTTCGACCTAAGAACCTGGCAGCCTAAGCAATACATACCCATCAACATAGAAGGTATATGGTTAACGATGCGACCTTTGACACATAAAAGTTAGATTGTCCATAAAATCGGCCTTATTTTGCCATTGGTCAGT # Right flank : TAATTTGTGGTATTTGTATAATTTGTTCTTGCATAAGCGGTAAGAATCAGCGCTGTTCATTGTAAACATAAGCGAACACTTGTGTATCAAGTTGTGTTCACGTAAAGCAAATGAGCCACTTAGTACTTGTACTAAGTGGCTCATTTTCAAAGCTCCCGAAGCTGGGCTCGAACCAGCGACCCTCTGATTAACAGTCAGATGCTCTAACCGACTGAGCTATTCGGGATCGTTATCGAAAACGTGGTGCAAAAGTAGTGTAGATAGCGATAGCACGCAAGCTCCAACCGCAAAAAATCTGCAAAATTTGCAAGCTGATGCCCTTACCGCCCCGGATAGCCACCCCGTGGCGTATCAAACGCGTCGGGCCGATTGTTCGGTACGTTCTGGAGAATCAGCTCTTTAACCCGCCGGGCATCACCCCGCGTAAAGTTTTTGATGACAATCTCCGGGCGAGCCCGGGGAATCACCCGGATGGTCGAGAAAAACAGACCGTTGTCGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTACGTACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1753731-1744000 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIT01000009.1 Fibrisoma limi BUZ 3 strain type strain:BUZ 3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1753730 29 100.0 37 ............................. GGGTTAAAGTGCGAGACGCTGGATCTCTCCTGGGGCT 1753664 29 100.0 38 ............................. AAAGAGCCCCAGGTTATTCACATCATCGGGGTTTTAGA 1753597 29 100.0 37 ............................. GTAGCGGCTGGCCGTTGGCAGACAGCGCACCGTATGA 1753531 29 100.0 35 ............................. GTTTGACGAACTGAGCAAAGTAACGCGTACGGCTG 1753467 29 100.0 35 ............................. TTTGGCGTTGCGTTCGTAACGAATTGATAGTTCGG 1753403 29 100.0 35 ............................. TAGACGAAACCGAACGGTGATGGGCATACGTAGTC 1753339 29 100.0 37 ............................. GTTGCCCTCTGTCGAAGCCTTAGCCGCCTATCCAGCC 1753273 29 100.0 37 ............................. TGGGTATCAAAACGAAGTTTACGGGTCATAGTATCTC 1753207 29 100.0 37 ............................. TTGGTCTGCGTCGCTGAGGTGTTGGTCGACAGGAAGC 1753141 29 100.0 38 ............................. AATGGCGTCCAGGTTACGGTCGGTTAGATTCAGCCCCA 1753074 29 100.0 37 ............................. AGATGTTGGTACTCTCGTCCAGATACAGGCACATGAT 1753008 29 100.0 38 ............................. TCCCCAATGGTGAGGTTATACGCGGCCGGTTCGGGGTT 1752941 29 100.0 39 ............................. ACAGCAGCGACCTATCGGCCCTAACCATCCTGTCAGGTA 1752873 29 100.0 38 ............................. TAGGTGTCCAGAAACAGCTTTGGTGTCCCCGAGAAACT 1752806 29 100.0 38 ............................. GTGAATGATTCGGGCTTCGTAACCCGGCCCAGAAACTT 1752739 29 100.0 38 ............................. GTGGGGGCTATCAGGTCGTTGGCTCCGGCACCGTTCGT 1752672 29 100.0 38 ............................. GTTGAATTAATTTTCTGCTGGTTTATCCTCGTCAGCCG 1752605 29 100.0 35 ............................. GACTTAATCGACCGGGTGAACGCCAAGCTGACTGA 1752541 29 100.0 34 ............................. TACGAGGTCTTAATATTGGCGATGTCGGTAAGCG 1752478 29 100.0 35 ............................. AATACATACCGGCACCAAACTATAAGCGTAAAGGG 1752414 29 100.0 39 ............................. TATCAATCGTACCCCAGTCAATCGCCAGAATCTGACTGA 1752346 29 100.0 35 ............................. GAGCTAACCCCTAATTGATGGGACGCCCCACCAAT 1752282 29 100.0 37 ............................. GCGCTTGGCAAAGTCGCGTTCGATCTTTTCGCGGGCT 1752216 29 100.0 38 ............................. TAAAAGGCGGCATTTCAGACGCTATGAAGCGTTGCGCG 1752149 29 100.0 39 ............................. TCAGGCGCAATTCCCAAGTGTTACCCAGGCCGGCCGCTA 1752081 29 100.0 36 ............................. TAGCACCGTGGAGTAATGTTGTGATGGGTTGCACCT 1752016 29 100.0 37 ............................. TATTCAATTACTTGCCTTGCCGCCAACAGGGCGTTGT 1751950 29 100.0 37 ............................. TTGGAACGGGTCACGTTCGACGGTTCGCCGGGCATCC 1751884 29 100.0 38 ............................. TCGTTATGATTGGTGTAGATGTCGTTAATGAGCTCCGG 1751817 29 100.0 36 ............................. AGGTTAACAAACTCGCTTTTCCATCGAACCGGATCT 1751752 29 100.0 35 ............................. TGGTAGTTAAGCTGCTTTAGATCAAATTGCACTAG 1751688 29 100.0 36 ............................. ATTTAGGTCGGGGTATGGGGCTTGAGCCGGTCATTA 1751623 29 100.0 34 ............................. TCATTCTCACATTCAGACAGCTAAACGGATTCGG 1751560 29 100.0 37 ............................. GGCGGTGGTCTACTACCACCAATCGGGCTTACCGGGC 1751494 29 100.0 35 ............................. CTTCGTAACGCCGTTGACGTCGTCTAAGTCGGCAA 1751430 29 100.0 37 ............................. GTTTGAGCGGGAAAACGTCGCCGTCGAACTATTCGGA 1751364 29 100.0 35 ............................. ATGCCGTCGGCGCGGGTTCCCCGCAAACGATCCGC 1751300 29 100.0 35 ............................. CAGGTAATAGCCTTGAAGCATCGTATTCACCTGCC 1751236 29 100.0 38 ............................. TAGGTAGTTGTAGCTCACCGTGGCCGGGGGTGGGTCGG 1751169 29 100.0 34 ............................. GAAGGGGGTGGGCCTGCTCCAGATAGGCTTTAAT 1751106 29 100.0 37 ............................. ACGAAACAGCCGCCAGGACGTAACCATGCGCGGGTTT 1751040 29 100.0 36 ............................. TTTGTCGATGACCAGGCGCAAAGCCGGGATCAGAGC 1750975 29 100.0 35 ............................. CAGGGGCGGGTACGCCTTGTATTCTTCGCCGGTAT 1750911 29 100.0 36 ............................. CTGGTCGTACGCTGTTGGACGTGGGCTTCTACTCCC 1750846 29 100.0 36 ............................. GTGGTTATACTAGGCGTGGTTGTTTTGATTGCGGCA 1750781 29 100.0 36 ............................. GGCTTCTTCCTCCTCGCGCAACCTGATCTGCTCGGC 1750716 29 100.0 36 ............................. GGAAACTATCTGAGCAGACCCGCCTGCACGGAGAGA 1750651 29 100.0 36 ............................. ATCGCCACAGAAGATGTAGGCACCCAGAGACGGAAA 1750586 29 100.0 35 ............................. GCGAAATTCGGTTTAGCTCCTCAATCGCGGCTACC 1750522 29 100.0 35 ............................. CTGGGAGTAGAAGCCCACGTCGACCAGGGTACGAC 1750458 29 100.0 38 ............................. ATGTTATCCAGTGTCTGCCGGGAAATGCCTAATTCATA 1750391 29 100.0 39 ............................. ACCGTAAACCCACTCGATAAACTGACCACCCGGCAGCGG 1750323 29 100.0 36 ............................. TTTAGCCGTGGCCAGCTTGCGTTCCCACCAGCGTAG 1750258 29 100.0 35 ............................. TCGGCCACGCAGATTCACGGCAGCATGAGCATTGA 1750194 29 100.0 39 ............................. CTGGTGGGCCGCGCTGGTTGATGTTGTTCATACGCTCGG 1750126 29 100.0 38 ............................. GTAATTAATCATTTGAAAGGTGTAGCCAAAAACAAATT 1750059 29 100.0 39 ............................. CTTATCGGATCCTTTCTTACCCGATTTCAGCCCTTGCTT 1749991 29 100.0 36 ............................. ATGAGCTAGGCGATTCCGCCCGGGCTAAGTACCATA 1749926 29 100.0 37 ............................. CAACCACCAGTTCAGCGAGAACTCGGAACACAAGCTG 1749860 29 100.0 37 ............................. ACGGTTCACGCACGGCTACATCCTCATCGCAGACAAA 1749794 29 100.0 38 ............................. GAAACAGCTGCGCCCACCGTGCCCCCTTCCGCTTTGGA 1749727 29 100.0 35 ............................. GGGGGAAAGCCTACCAGCGCCACGGTGAAGCATGA 1749663 29 100.0 37 ............................. GCAAACCCGGCGCGGCTTTATACTGGTTTAGGCTGAT 1749597 29 100.0 37 ............................. CAGTTCGAGCACCTGGCGGGTCTGCCCCCGGGTCCGG 1749531 29 100.0 35 ............................. TTTCGAATCCTGATGGAAGATCCTGCGGTGAAGGG 1749467 29 100.0 36 ............................. CAAGCGGCTCATGCAGGCGACGGCGACGCTGACGGA 1749402 29 100.0 35 ............................. TTAAACGGCGCAAGGTGGAGCGGTTGCAGGCCAAC 1749338 29 100.0 38 ............................. GTGAACCGGCAGAAGCCCGGTAAGCTGAGCACGGGGGG 1749271 29 100.0 38 ............................. CTGTAGAGGTGTGGGCTAATTCCCGCTAACAGGCATTA 1749204 29 100.0 38 ............................. CATTCCAGCCGCCCCGGGATTTATCGTCCGCCCGCCAG 1749137 29 100.0 38 ............................. GGAATCAACCGGACCTCTACCGTACCGTCTACCGGTAC 1749070 29 100.0 36 ............................. CTTACACCAGTCTGGCATCTTTGCGGTGGCATGAAT 1749005 29 100.0 35 ............................. TTCTGGTCGACCGACGGTGAAATTTACAGTCAGCA 1748941 29 100.0 37 ............................. GGAGATACGGCCGAATTGGTGATGCGCGATTCTGATT 1748875 29 100.0 38 ............................. GAGTAGGAAAACGCCCGGATAAACGTCGCTCGAGCGGC 1748808 29 100.0 37 ............................. AAATCCGAGTCGAGCTCCAAAAAATCCGAGTCAACAT 1748742 29 100.0 36 ............................. GAGGGAAAGGCACGAAAGGCGGCTGCTACGTAAACC 1748677 29 100.0 35 ............................. GTTTTCTTGCAGACCAGGTACATCACGCCCTTTAT 1748613 29 100.0 37 ............................. CACCCAGTTACGCGCTTCAGCAGAACCGGTGACCCGG 1748547 29 100.0 35 ............................. ATGGCTTGAAATTGGGAGCTAGTAAAACCCTCTTT 1748483 29 100.0 36 ............................. GCGCAGGTCAGTATAGGCCCGGTAAAAACCCCGGGC 1748418 29 100.0 35 ............................. TTAGTATATCTCGCTTCAGGCACTCCACACACAAG 1748354 29 100.0 35 ............................. GTCTACCTCCTTTTCTAATGCGATACCGGCAAGAG 1748290 29 100.0 35 ............................. GTATTTGTAGCAGAACCACTCTTTGTTGAAGCCGG 1748226 29 100.0 36 ............................. TTTCCTTGACCAGCGCCACCGCGTCAACCTTTTGGT 1748161 29 100.0 37 ............................. TTCGTCGGCGCCAATGGTATGGTAATCGGTGGCGTTC 1748095 29 100.0 37 ............................. ATCAGCTGCTAAGCACCACGTTTACGGGGAACACCCC 1748029 29 100.0 35 ............................. TGCGAAGAACAATCCGGACTCACGATTCAGCAGAA 1747965 29 100.0 36 ............................. CTACGACACGCTGACAATATCGATAAGAAGAAAAAG 1747900 29 100.0 37 ............................. ATGGCAGTTTGAAGCTGTAGGGCTGGCCGGGCGTAAC 1747834 29 100.0 35 ............................. GATAGACGGAATACACGCCCGTGGTGTAGGTGACC 1747770 29 100.0 37 ............................. TCGGTACTGACGTGTAGTTCGAAGTCAATTGGAAAGT 1747704 29 100.0 38 ............................. AGTCGAATCTGATGCCGAATCCGTCCTGCTGAATCTCA 1747637 29 100.0 36 ............................. CAGCGTCTACGGCCTTGCTGGCGATTGAAAAGACAA 1747572 29 100.0 35 ............................. GGGGCAATGCCTCCGGCATTCTTACCAGCCGATTG 1747508 29 100.0 36 ............................. TAATATTTACCTATCCGATAAAATGCCGGAACCTAT 1747443 29 100.0 37 ............................. GCAGTTTTTTGCTGATTTCTTCTACGGCGAACACCAT 1747377 29 100.0 34 ............................. CTGGGTATCTGGCTGCGTAAATCGAAGGAGGGAG 1747314 29 100.0 38 ............................. TAGTATTCCTGGCCACCACGGTTGATGGCCATCACCTC 1747247 29 100.0 35 ............................. GTCTTTTACACGGCCTCGCATCCGTACATGAGCCT 1747183 29 100.0 38 ............................. CCTGAATCCGGACTGGTGTGAGCTGGACCACGTCGGCA 1747116 29 100.0 36 ............................. GGGGCTGTTGGTTTAGTCGTATTTGGTGAGCTTTGG 1747051 29 100.0 37 ............................. TTGATCTGCTGAGCCGCGAAGGGGCGGAAGATTTGTC 1746985 29 100.0 39 ............................. TATCTGCGTTCTGGATGGTCAGGAGTCGTCTACCGACAT 1746917 29 100.0 38 ............................. GGACGTTATAGAGCACAATCAGCGTACCGTCAGCCAGC 1746850 29 100.0 36 ............................. TGGACACGCCCCCGTTCCAGTAGTAGCTATTGGGCC 1746785 29 100.0 36 ............................. CGAATTTGTCATTAACAACCGGGCCTTACAGGAACC 1746720 29 100.0 37 ............................. TTTGCCCGCTTCCTGAGTTGTGGTTTATCGGCCAATC 1746654 29 100.0 34 ............................. TTACGTTCGTGGGTACTTCCGGCGGGGGGATCGG 1746591 29 100.0 36 ............................. TTTTAACGATTCGGTTTTCAGCTGGATCAGCCGAAG 1746526 29 100.0 39 ............................. TCCAAATCAATTCGGTCGCGCCGATACCCGTGGCCGCCT 1746458 29 100.0 36 ............................. GGGGTATATTCTTGAGTCATGCTCTGATCCTCGCTT 1746393 29 100.0 35 ............................. TATCCAGTGCGGGCTACCTCACGATCAGCAACAGC 1746329 29 100.0 35 ............................. CGAATTTGGCCCGCTTGCGAACGCGGCTCGCGGAC 1746265 29 100.0 36 ............................. AATACAGCTACGAAACGAGCGAGGACGAGACACCAG 1746200 29 100.0 37 ............................. GCGTTATTTGTCTGAGCTATCGGCTATCAACGTAGCG 1746134 29 100.0 37 ............................. TACACGTCAATCAACTCTTGCCACTTCTGAAACGCTT 1746068 29 100.0 38 ............................. TCAGGCGGCATTGGTGGTGATCAGACGGTTCTACGCGG 1746001 29 100.0 35 ............................. GTTGTAATCTGTTTGGCGCGGAGGTAAACCGTTTT 1745937 29 100.0 35 ............................. AATATCGTTTTCTACTTGTTCATAGCCCGCCTGAG 1745873 29 100.0 35 ............................. TTGCTTAGTAGCCAGACTTTCGAGTTGGTAGGATT 1745809 29 100.0 35 ............................. GAAGATTCTGAAGTTGATCCGAAAGGCGCATCTGT 1745745 29 100.0 35 ............................. AAGATTGAACTATACGCGGCTGATGCGGCCCTGGA 1745681 29 100.0 37 ............................. TCGTCGAGTCGCGTTTGAAAAACCGCGTAAGGGCCTG 1745615 29 100.0 38 ............................. GTGAGTGACGTGTAGCGGGCATCCCCCCGGGCGTTGGT 1745548 29 100.0 38 ............................. CAGACTCGCTGCAACTGAACTCGGGTAACTAACCGCCA 1745481 29 100.0 39 ............................. AAGAAAGCGAGAAGAAAATCAAGGAATCAGCCAAACAAA 1745413 29 100.0 37 ............................. CTGGCCTACGCCAACCATTAACCCCGATTTCGATGGA 1745347 29 100.0 37 ............................. TCGCCTAAAAGGCGAGGGATTTTCTCCCATTCCCAGA 1745281 29 100.0 37 ............................. GTTATGATCTAGAAGCAGAAGATTACTGTTATGTTGA 1745215 29 100.0 38 ............................. GACGGAGACGACAAGAGCCGCCAGCGTGGGCGCTGAAG 1745148 29 100.0 37 ............................. GTGACAAACGCCTGCACATCAACCCTCGCATGGCCTA 1745082 29 100.0 38 ............................. TTCGCATCCTGAAGCAAAGCGATCCAGCGAACCGCCCG 1745015 29 100.0 36 ............................. GATGAAATAATAAAACCGGCCTTCATCCACAAGTCC 1744950 29 100.0 36 ............................. GCGAATCTCATTAAACTGCTCTCGCAATGCATCGTA 1744885 29 100.0 37 ............................. TAGGGACTGTTTAGTCCTCTGTTGCCTCCGGCTTTTT 1744819 29 100.0 37 ............................. TATGCGTAGACGTATATACGCTCATGTAGGTTTTGAC 1744753 29 96.6 36 .....................T....... ACGCTAAACACGTCATTACTCCCTTTATCGACGCGT 1744688 29 100.0 36 ............................. TTGGCATCTGGACCGAAGGCCGTCGCGTTGAGGTAA 1744623 29 100.0 39 ............................. TGAGCTGAACAATATCAAGCTGATCAAGAATCAGCCTTA 1744555 29 100.0 36 ............................. TTCGGTTGCCTCGATTTTATGGTACTTCATACGATG 1744490 29 96.6 38 ............................G AGGAATTACCGGGCGATTCGTGGGCTACCAGCCAGCCC 1744423 29 100.0 38 ............................. ACGAGCAATTCGGGTGGGTGGCTGCAATACTATTCGGC 1744356 29 96.6 37 ............................G ACAAAAGCCGAGATGATCTCGCTTACCGATCTCGCAG 1744290 29 93.1 38 ...............A............A GGAATACGTAGCGCCGACGCCCGGCGCTATCGGCTTTG 1744223 29 100.0 37 ............................. GACCGACTGCCTGGCGGCTTTTGACAAAGCGGTCAAC 1744157 29 96.6 36 .................A........... GTCTTCGTCAAGCAGTTAGGGACGCATCTAGTCAAA 1744092 29 96.6 35 ............................G TATCGACCTTTGATGGCCTTCAGGAAATCCGACAC 1744028 29 93.1 0 T...T........................ | ========== ====== ====== ====== ============================= ======================================= ================== 149 29 99.8 37 GTATCAATCGCACCTTCGGGTATTGAAAT # Left flank : GTTATGGCTATGCCGTTTTGTATTGCCGTTTATGATGTGAACCAGAAGCGAGTGGGTAAAATGCTGAAGTTATTTCGGCGATACTTAACCTGGGTGCAGAATTCAGTTTTTGAGGGTGACCTGACTGTTAGCCAGTTAAAGCAGTTACAACTGGAGGCGGATGCACTTTTGCAAGAGGATGACGGGGTAGTGTTTTATCAGTTCCGTGACGAACGCTATGTCGAACGTATTGCATTAGGCAAAGACGATGTGAATCGGACACGATTTTTGTAGCTGATTCAGTCGTCATCCTTTATAGAGCAGCCAGACGACGGAGAGCCTAATTGCTAATAACACTCAGATTTTAGCTCTAAAATTGCTTGTAGCGCCTTAAAAAGCTATTTTCAAAAAGTCGTCGGCCTACTACTGTTTTTACAGTATTTCAGGCCGACGACTTTTGCGTTCGTTTTATAGTCTAAAAATCTTTACTTTAAGCTCTATAAAGTGTTATTTTGAGCTTG # Right flank : CTCTAATTATGACCTACTGTCTTCTGAATCCACGCCGATGCTGTTGTTGATGCTTTTGCTCTCGCTTCATGCGTGCTTGTTGCGCTAACTTTTTGACTTCAGCCTCATCAATAGGCTGACTTTTTACAGGTTGCGAATGTTCGATCTCTTGGCCTCCGTCCGTATCTTGTTGACCGCTGGTTTTGGTAGATGTTTGTTGCTGTCGATAGGCCTTGATCATATCAGCCGCCTTGTCCTGGCTCTGGGAGATATCGGGTATCGGGGTAGGTGGTATGGGCTCCCCCAAATAATCTCTTTGTTCTTGGGCGAAGCGGGTTTGGAACTCTTTGACCTTCTTCTCATGCAATACTTTGAGCCGGTCTAATTGACCGTCATACTGGCTTTTATCGTAATGTTTGTTTTGTAGATCTTTGAGATTTGCCTGATCCGCGTAATACTCCTGATTCAGCTGTTCAAGCTCTTTTTCCTGACGAGCGAGAAGATCACTGTATGACATAATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAATCGCACCTTCGGGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.00,-2.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //