Array 1 3852000-3847699 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031093.1 Hydrocarboniclastica marina strain soil36-7 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3851999 29 100.0 32 ............................. TGTCCGTATCATTATCGTAGGTAATGCCGAAT 3851938 29 100.0 32 ............................. GCCAAGCGTCGCAGACCCAAGACGCCCGATCA 3851877 29 100.0 32 ............................. TTGCTGCCGGTGAATTCGTTGATGCCAGCAAT 3851816 29 100.0 32 ............................. GAAACCTCCGTTTGGTTAATCTTGATATTCAC 3851755 29 100.0 32 ............................. GATGCAATAAACGATTACGGTGGACATATTAT 3851694 29 100.0 32 ............................. CAAATTTCACACGCCCTGAACGGCCGGGCCGA 3851633 29 100.0 32 ............................. CTCAGTCTCCATCATGTACTTGCGAGATGAGC 3851572 29 100.0 32 ............................. GTGGTTACTTCAACACCGACGCGATCCAGTGG 3851511 29 100.0 32 ............................. AAGACGGGCGGCCGGCCAGGGGTGGCGGCATG 3851450 29 100.0 32 ............................. GTTGGCGACCCCTTTTGCGGAGTCTGACAAAT 3851389 29 100.0 32 ............................. CATCCCCTCAACGCTGAATTTCGGCGTGTAGT 3851328 29 100.0 32 ............................. TTCGAACGGAACAATAAGACCATCACGCGCAT 3851267 29 100.0 32 ............................. GTTTAGTTGCATTGGGCGCAATAGGCGCGGGG 3851206 29 100.0 32 ............................. AGATGCGGCCATCCCCTTAACCTGCTCGTCTG 3851145 29 100.0 32 ............................. GCTCTGAACAACCCAGATTTCGAGGTTATCAC 3851084 29 100.0 32 ............................. CGTTCCTGAAGGATGGGCCTTGTGTGATGGAG 3851023 29 100.0 32 ............................. AAGCCCTTCAGCTATTCTCTCATCACGCACCG 3850962 29 100.0 32 ............................. AGGTGCCGGCGGCGCGCCACAGGACCTCCATA 3850901 29 100.0 32 ............................. ATCGAGCAAGCACGGGCAATAGCCCAGTTGTC 3850840 29 100.0 32 ............................. TCTTTAGGTCGCCTAAAACCCACCCCACCCCT 3850779 29 100.0 32 ............................. GCTGGGGCGGGGTTCGATCAGGTGGCCGAGAC 3850718 29 100.0 32 ............................. ATGCTTTCGCTTCACGACGATGTAGCGTTCTT 3850657 29 100.0 32 ............................. GAGACGCGGCAGGTGGTAGACGCGCTCAAGGA 3850596 29 100.0 32 ............................. CGAATTGATGAGATAGGCAATATCAAAGGCGC 3850535 29 96.6 32 ............................T CCAGCGCAGTATCTGCCGATACCAGCGAGTCG 3850474 29 100.0 32 ............................. GAGTGGATCTTCCAGCAGGAGTATCCGTCGTT 3850413 29 100.0 32 ............................. ATCATCATCCAGGAGCTGACGGAAGCCGTCGA 3850352 29 100.0 32 ............................. ACAGCATCGTTCGCGTTGTCCGGCTGCTCGGT 3850291 29 100.0 32 ............................. TTACACCTGATCGCGTCATGAGTCGGGTTGTC 3850230 29 100.0 32 ............................. GCTGGCAAGACAGGACCACTTGCAAAGTGGTT 3850169 29 100.0 32 ............................. AATGGTGTCGCCTTCACCCAGAGCGTCGTTGC 3850108 29 100.0 32 ............................. GCCTACAAGTCAAGCCGCTCCCTGGCGCAGAA 3850047 29 100.0 32 ............................. GTACTACCTGTGTCAAACGCAAGAAATAAAGT 3849986 29 100.0 32 ............................. TACCTTTGCTGTATAGCCTGCAATGCCTCTCC 3849925 29 100.0 32 ............................. CGCAGGCAGATGATAGAGCGGTCCACCAGTAT 3849864 29 100.0 32 ............................. TCAACGGCCAGCGCATGGAAGTCTCGCCGAAG 3849803 29 100.0 32 ............................. ACGAACAGTGGTCGCTCAAGCGCCGCGCCGTC 3849742 29 100.0 32 ............................. GCTTCAATGTATGGATCAAGCTGAAGCCACTG 3849681 29 100.0 32 ............................. ACCATTTATTTTTACCAGTGCACCGTATGAGC 3849620 29 100.0 32 ............................. GTCTGCCGATCTTCATTCCAGCTCTCGAATCG 3849559 29 100.0 32 ............................. CCAGCGGAACCAGCTTACGGTCCAGGATGCGG 3849498 29 100.0 32 ............................. GGCTATAGGAGTAAGAAGTGATGGATCAGGAC 3849437 29 100.0 32 ............................. GCAGTACGCCAAGCGCGCGAGATTGCAATAAA 3849376 29 100.0 32 ............................. TAGCAGTAAAACCAGCCAGAAAGCCGAAGGCG 3849315 29 100.0 32 ............................. GAGGACATCCCTATGAACAACACCGGCTCTTG 3849254 29 100.0 32 ............................. TTGAGTGGTGCGATCGTCGGGCGCAGCCGGCC 3849193 29 96.6 33 ............................T TTATCCCCTTGCGAGCCTATCGGAGAACAGACC 3849131 29 100.0 32 ............................. AAACCATTCAATGGACGATCGACGGGGATGCT 3849070 29 96.6 32 ..................T.......... TAGGGGTTCATGGCTGACCAGCAGAAAGCCCG 3849009 29 100.0 32 ............................. CGCACCGCGAGCGTATCGGCATGCAGCGTGAA 3848948 29 100.0 32 ............................. GGTCTGCGCCATCTGGCGCTTGAGCCAGACCT 3848887 29 100.0 32 ............................. ACATTCTCACCGCAGCCATGCGTAGCCACCAG 3848826 29 100.0 32 ............................. ATCGAGAAGCAGGCCGCTGAAGCTCGCAATCG 3848765 29 100.0 32 ............................. GAGCGTGAAGAACGCGCCGAGGCCAAGCGCAA 3848704 29 100.0 32 ............................. GCCGCGCAGCTCTTTGGCGAAAGCTTCAACTG 3848643 29 100.0 32 ............................. GCCGTGCTAGTCAACGCGACGTTTAACGAGGC 3848582 29 100.0 32 ............................. ACTTCGCAGACCGTATTTTCCTGGACGCCATG 3848521 29 100.0 32 ............................. TCGTACGTGTCCGTTTCAATAATCAGCTCGTT 3848460 29 100.0 32 ............................. TCATGGCACTTGAAACCGCAACGAACATTACC 3848399 29 100.0 32 ............................. TACATGTAAGCTCCGCCCCCGGCCAGTGCGGC 3848338 29 100.0 32 ............................. CCGTCTTTGTGCTGACAAACGCCAGATCGGCC 3848277 29 100.0 32 ............................. AGGCAGCAACCGGCGGGGCCATGCTTGAGCGT 3848216 29 100.0 32 ............................. GCTGACTTACTGGGCACACTGGGCGCCCTGAG 3848155 29 100.0 32 ............................. CATGAATGGCAGCGAAGGTCAGCGCCGGCCGC 3848094 29 100.0 32 ............................. CCCCGCGAGATTGGATCAGGCGAGGCTTAGAG 3848033 29 100.0 32 ............................. CCAGCTATATATGTATTACTTGGCACGTGAAG 3847972 29 100.0 32 ............................. TTTGGTCCGGCAGTGCCACGGTGGTGACGCCA 3847911 29 100.0 32 ............................. GTATTAGACTGTTGACAGGGCTTGTCGAGGGG 3847850 29 100.0 32 ............................. CCGGTATCCCGGAGACTTGCGACACGTGGGCA 3847789 29 100.0 32 ............................. TCAAGAATAATCGTTACACAATGAAAGACATC 3847728 29 86.2 0 ..............C......G..T.T.. | C [3847719] ========== ====== ====== ====== ============================= ================================= ================== 71 29 99.7 32 CCGTTCCCCGCAGGTGCGGGGATCAACCG # Left flank : TGGTGGCATCGAACCCCCGCAACCAGCTCCGGATTCTCAACCCCCCGCAATCCCAGAGCCTGACTCCCTTGGCGACGCTGGCCATAGGAGTCAGTAGCATGAGTATGCTTGTTGTTGTGACCGAGAATGTGCCCCCCAGGCTCCGCGGACGCCTGGCCGTCTGGCTGCTTGAAATTAGGGCAGGTGTGTATATCGGCGACGTGAGTAAGCGCATACGGGAAATGATCTGGGAGCAGATCTCTGCCCTCGCCGAAGATGGCAACGTAGCAATGGCCTGGGCTTGCAACCATGAGTCTGGATTCGATTTCCAAACCTACGGAGAAAACCGCCGTGTTCCTATCGACTATGACGGATTGAGGTTGGTAAGTTTTCTGCCGAAAGATGTAAGTAATTGATAGGTAGGCGTTCTTTAAAAAAACAGTGATCCTAAAAGAAGGAATTCGGGCGGTGGATTTTTAGCTGTCTGATTTTCCTTTGTAATACAGTCGTGTACGATAAGT # Right flank : GACATTTCGGGGGACTGGCCGAGTAGGCAGCTCAGAAACTAAGGGGCCGACCCGCCTGAGCCAATGCGTTATTCTTTGATGGAGGGGTTGAGGAATTGTCGGTTCCAGAAAAAAGCGCGGTCTGTTTTAGAGAGCCCCGCTTCGTCACACACAGCCGTCCAGTGTTCACGGATCACTGCTTCCTGGCGATCCATCTCTTCAAGGGCTTCGGCCTCGCTTACGCCGAAACTTCCCGCCGCCCGAACACAGGCCAGCAGGGTGCTGGCATTTTCTCGGCCTGCGATAATCATCCCTTGAGAGGCCACGTTACCGGTGCGGCCCTGAGGGCAGATGTCGTATGCAGGGGAGAGGGTCAGCCTTTTGCCATCCCAGAAAGCGGCATGGTTTCGGGCGTGGTCGTCGGTATTGCCGGTAAGGACGTTGAAAATCAGACGCGAAAACAGCTCGCGGTTGGTGTCCGAGGGATTGATGAACCGTTTGCGTACAACGGCAGCCAGGTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCAGGTGCGGGGATCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGTTCCCCGCAGGCGCGGGGATCAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //