Array 1 3350506-3347183 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP037867.1 Hydrogenophaga pseudoflava strain DSM 1084 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3350505 29 100.0 32 ............................. ACCCGTGCGCGGGCCGACAGCGTGCGCGCCGT 3350444 29 100.0 32 ............................. CGCTGACGCGGACGCGCTGCGCGCTGCGTTCA 3350383 29 100.0 32 ............................. CTGGCCGCCAGCCTGGAAGAAACCAACCGCAT 3350322 29 96.6 32 ............................G TGGATGGAGACGGTGCCCGATGGGGCGGTGAT 3350261 29 100.0 32 ............................. GGTTCCCTACCTCTGGCCTTCACTTCAACGCC 3350200 29 100.0 32 ............................. GTCACGATTGATCCCTGCCAATGGCAATCGAC 3350139 29 100.0 32 ............................. TCGTCACCGGCCACATCGTCAGCCGATCCAGC 3350078 29 100.0 32 ............................. TTGGCGAGATCCAGCGCCGCCGAGCTGACGTC 3350017 29 100.0 32 ............................. CTGGCCGAGGTCTCGGCGCCCTACATCTACGT 3349956 29 100.0 32 ............................. CTCCCGCTGAATGCCCGCATTCGCGCCTTTTC 3349895 29 100.0 32 ............................. TGGCGACGCACCTCTGCCAGCAGACTGACGCT 3349834 29 100.0 32 ............................. CTATCAGGCAGGGGGCGTGGCGAATGGAGCTT 3349773 29 100.0 32 ............................. CCTTGCCGGTCCAACTGCCGGGGCCTCGACTC 3349712 29 96.6 32 ............................G TGGTCGGGGTCGACGATCTCGACCATGTCGCC 3349651 29 100.0 32 ............................. TGCTGGCACCGCCAGCGAGCACGTTTTACGTG 3349590 29 100.0 32 ............................. TGCCCAGCCGCCCCGTGGCAGCGCTGCTGTTC 3349529 29 96.6 32 ............................G TAGAAGGATTCATCTGACCATGACCGCACCTG 3349468 29 100.0 32 ............................. AGCCGGCGAGCCGGCGCGGCGCGGGAATGCTT 3349407 29 100.0 32 ............................. GCGCCGACCTATGGCTACCTCAAGATCATCGA 3349346 29 96.6 32 ............................G TACCGTGACGCCTGCTACATCCTGACCAAGCA 3349285 29 100.0 32 ............................. GCCGCGAACGTGCGGCGGATGTCGGTGTTTGC 3349224 29 100.0 32 ............................. CGCATGGAAATCATGGAAGTCATGGGCGGTAG 3349163 29 100.0 32 ............................. GAGTACCAAGCTCGCAAGACCTCTGAACTCAA 3349102 29 100.0 32 ............................. GAGCAAGGCCACGAGGCAGTGATCTACGAAAT 3349041 29 96.6 32 ............................T TCCCAGCGATCAGACCGAATGTCGGGATGACG 3348980 29 100.0 32 ............................. ACCGTTGCGCGCGCCTGGGCCTCTTCGGCTCC 3348919 29 100.0 32 ............................. GCACCCGTCACGCCGCCCACCAGAGCCGGAAT 3348858 29 100.0 32 ............................. GCTTCGTCAGGTGTGGACGGGTATTCCTGCCA 3348797 29 100.0 32 ............................. CGCCCATGAGTGGACATACCTACTGGCCCCCC 3348736 29 100.0 32 ............................. CAAAAGGACTGATGCAAATGGACCTCTATCGT 3348675 29 100.0 32 ............................. GAGACAGCGACGGAGACGACCGCGTGCGGTGG 3348614 29 100.0 32 ............................. CAGTCCAGCCACCCGTCGCGGTCGCCCACGTA 3348553 29 100.0 32 ............................. CTATTCGGCCGGCGTGGTCGGCGTCTCAACAT 3348492 29 100.0 32 ............................. AGCGTGTTGGCCTTCCCGAAAACTGCTGAATA 3348431 29 100.0 32 ............................. GGCGAAGCGCGCGTCACAGCCAAGGTTGGCGA 3348370 29 100.0 32 ............................. CTGCAAACAGCCACGGCGACGCCTGATGCTCC 3348309 29 100.0 32 ............................. CGCCCACCCTTCCGCGAGTGGCACATGGCCCA 3348248 29 100.0 32 ............................. AGACCCAGCGCCCCACGCTGCCGACCTTCGGC 3348187 29 100.0 32 ............................. AGCAGGGCGCACAGGGCCTGTTTGCAGGTGCT 3348126 29 100.0 32 ............................. CGAGCCCTCAAGCTCATGCGTTCTTCCCGAAA 3348065 29 100.0 32 ............................. TGCCCGTATTGGGTGTTGAAGGCTTGCTGAGC 3348004 29 100.0 32 ............................. ACGACCGAGGTGCGCGTGGTGGGCGAGCACGT 3347943 29 96.6 32 ........T.................... TGACCAGGGCCCAGTTCGCGGCCCGAATGAAC 3347882 29 100.0 32 ............................. CTGATGATCGATGCCGGCGTGCGCGGTGAGCA 3347821 29 96.6 32 .....T....................... CCGCTGCAACACACGCTGCAGCGCCTGCGCCA 3347760 29 100.0 32 ............................. CACTCCCAGAGAGGGCCCGCGCCATGAACGAA 3347699 29 100.0 32 ............................. AGGAGGTCTTCATAGGCGTTGCTCATGTCAGG 3347638 29 96.6 32 ............................G CGTTACAACGCCCTGATTGGTCGTGTCCACCC 3347577 29 100.0 32 ............................. TACACGGGCGCCGGAATCGACGGCCTGCTGGC 3347516 29 100.0 32 ............................. TACACCACCGGGCAGAACGCCATCAGCCCGAC 3347455 29 100.0 32 ............................. GAATTGAGGGGAGAGGTGGCCGCTTTGTCGTG 3347394 29 100.0 32 ............................. AGGCCCGCGATGAAACGACGGAGCATGTTTCC 3347333 29 100.0 32 ............................. ATGGCTGAACTCCCGGACCTTTCAGGACAAGA 3347272 29 96.6 32 ..........................T.. TGCCGCATCACCACATCCCAAAGTTTGGTGTA 3347211 29 89.7 0 T..............CA............ | ========== ====== ====== ====== ============================= ================================ ================== 55 29 99.3 32 GGTTCCCCCGCGCGAGCGGGGATAGGCCC # Left flank : AGGATGGCCGGAGGAGCCGAGGAAACGGTTGACCGGTTGGTTCGCCGTGAAGCGGCACAGGTGTTTCGCAAACAGCAAGTCATCCCGTCGATGATCGATAAGATCAAGCAGGTGCTGCGCATGGAGGAGATCGATGGCGCTTGTGATGATCGTGGCACGTGATGTCGCCGACCGATTCCACGGCTTCCTCGCGTCTGTGATGTTGGAGGTGGCTCCCAAAGTGTTCGTCGCACCCAGGATGAACAAGGGTGTTCGGGAGCGCATATGGGGAGTTGTTGCCGATTGGTATGGACAGGACCCGAGAGGCAGTCTGGTGATGGTTTGGCGTGATCTGAATGAGGTTGGCGGTATTGGCCTTGCGCACCTCGGTACTCCTCCTCGTGAGTTGGTGGAGCTGGACGGCATGTGGGTGACCCGTCTCGGCGGATCAGGAAACGCTCTTTAATAATCCGAATGTGATTCGTTGTTTTCTCTTACTCCTCAACAAGTTGGGTGTGAGA # Right flank : GGGCACGGCGCCGCTGAGCGGGCAGGTCAGAAGATCGCCAATCACTCTGTGGCCTTGAGGTCGTCCTCACATCTGTTTCAAACGATCAGCATAGGCGGTTGAGCGGCTACGCCCTTGCCACCGGCACGTCGGCCAGACAGGTGGTGTAGGCCGGTGTCCTGCGCTCCTGCTTCATCGTCCACACCCGATTTGTTCCCGGGTTGCCGGTGCCACCGGAGTGCACGGTGCCTTTCCCGAAGCGTGTGTTGATCAGGTCCATGGCCGCCATGAGCCGACAGTGCTGCCTATGAACGTGGTGCTGATCGCCCTCGTTGCCTTCGTGTTGTGGGGACGCACCCATGCCATCCCTGCGATCAATCGCTGACCACTGCCAGGACCACGATCATGACCAAACTGCTCGTCACCGGAGCCACCGGCCAGTTGGGCAAGCGCGTCCTGCACCATCTGCTGGACACCTTGCATGTCGCGCCGCAAGACATCATCGCCACGACGCGTCGGCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCCCCGCGCGAGCGGGGATAGGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //