Array 1 79639-80933 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABVEM010000005.1 Faecalibacterium prausnitzii strain P9122, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================================================================================================================================================================================== ================== 79639 28 100.0 33 ............................ CTGGATGACCGTGCCGATGGTCTCATCGGTGAT 79700 28 92.9 33 ............TG.............. TGAGTCAGAAGGTTGGCGAAGCACAGGCTGCCG 79761 28 100.0 33 ............................ TGCGGCTTCTCCCTTCTCGCCCTTGCCGGTGCA 79822 28 96.4 33 ..............T............. GGGGCAGCGCCTGCCCTGCTGGGGCCTATGTGA 79883 28 100.0 33 ............................ CAGGCTTGCCACCGAATCGATTTCAGCCGGACG 79944 28 96.4 33 ............T............... CTTCCGCGGCTATAAGCTGAACCTCATTTCCGT 80005 28 89.3 33 ............T.T......A...... TATCTGGCCGACGATGTTTCGCACATCTTCAAA 80066 27 78.6 203 .......T.....-T......A.AC... ATGGAATAATGGGCACAATGCGGGAGTGTTCAAGCTTAACCTGAGGATGCAGAAGCGAATTACAAGAAAGAAGGTGAAACAATGGAACATGAATATGAAGCACTATTCAGAGCGATTTTGGAGCTTATCGACAAATGCGACACGATTGAAGAATTGCGTGAGAGCGTGAAGCGTATCATAGGCGAGGGTTAAGCTGAGATGCA 80296 28 89.3 33 T...........T.T............. CTACTTTGGTATGCGTGACAACGTGGAAGTTAC 80357 28 100.0 33 ............................ TGATGATTCCACCTATCCCTTCATCAGCTACCT 80418 28 92.9 33 ............T..........A.... CAAAGTGCGGCCCGGCATTTACTTCAAATTTCG 80479 28 89.3 33 ............TGT............. TATAGCCGCGTTGCCTACTATCTGGATATGGGT 80540 28 92.9 33 ............T.T............. CTGGGTGTACCAGTCATTGCCGGTCGGGTTAAC 80601 28 92.9 33 .............G.........A.... GAAGGGGGATTATAGGGGGTTACTAGGGAGAGC 80662 28 96.4 33 ............T............... CATCACCCAGAACATTTACAGCAAGGCCCAGAC 80723 28 96.4 33 ..............T............. TATGATGGAGCGGTTTCGTGTGGAATTGCTCAA 80784 28 100.0 33 ............................ CTTCAAAGTCCACCACCGGGATTCTTCTGAATC 80845 28 89.3 33 ............T.T.........G... CATCTGGCTGAATGGTCTGGTCGGTGCAGGCTA 80906 28 75.0 0 ............TGT........TCCA. | ========== ====== ====== ====== ============================ =========================================================================================================================================================================================================== ================== 19 28 93.1 42 CTTTTCCCCGCCCACGCGGGGGTGATCC # Left flank : TGTACCTGCTCCTGCTCAGTGAGGAACGGCCGGACCTGACCGCTCTGTGTGCGCAGTTCGGCACCGGTGCGCCCCCGGAGACCCGGCCCTATGACCCGCTGCTGGAACGGGTGACAGCGGGCAGCTGCTGGCAGTTCCGCCTGACCGCCAACCCCACCCGCAGCAAAAAAGACTCTGCCGACCATACGGCCCGAGGAACCCTGAAACCCTGCTATCTCGAGGTAGAGCAGGAGGAATGGCTGTGGGCACAGGCCGCAAAGCACGGCTTTGCCGTCTCGGAGGGGTCCTTCGCAGTGACCCGGAAGCAGACCTATCACTTCAAGAAAAACGGCACCCGGCCTGTTACCCTGCTGGCTGTGACCTACGAGGGCATTCTGCAGGTAACGGACCCAGAGGCCTTCAAGGCCCTGCTGTGCGAGGGCGTTGGCCGGGGCAAGGCCTACGGCCTTGGCCTGATGACCATCATCCACAGGGGAGGAGACCATGGCTGAGATGCCGGG # Right flank : CATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAAATGCAGAGCGAGGGAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCGCATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGCTACGGCACCGATCCCTATTGCGCCAGTGCGCGGGAGAAGATCCGCGCAGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGCACCCAGAGCAACGCCATCGTCATTGCATCAATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCCGCTCACGAGGCCGGTGCCATCGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACTGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGAAATATGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCAC # Questionable array : NO Score: 4.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.90, 8:1, 9:0.38, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCCCACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,1.01 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], //