Array 1 237800-232967 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLQO010000001.1 Peptoniphilus sp. MSJ-1 M1_ctg0001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================================================================================================================================================================================================== ================== 237799 30 100.0 38 .............................. TAAGCCAATCCTTTCTATTTCATGTTCCAATCTGTCAT 237731 30 100.0 34 .............................. GTACCCATTGCAACCATTGCAGCACCAAGACCAG 237667 30 100.0 36 .............................. TGGAGATTTTGACAACTTTATTGGATTTGATTCAGT 237601 30 100.0 36 .............................. TCTGCTGATATATGAGTAGAATTTAGTTGTGATATA 237535 30 100.0 37 .............................. TTGCAAGCGTAAAAAGAGCAAATAAGACTTTACCAAG 237468 30 100.0 35 .............................. TTCCATTTGTCCCTTGCACGTGCTTGTGCAGGGGA 237403 30 100.0 35 .............................. TTAAAGGCTCTTTTAAGTTCTAAAGTGTTTTGTCT 237338 30 100.0 35 .............................. GTTTCTCCAGCAATGCCCGCACCTGATAAAGTTTC 237273 30 100.0 35 .............................. CTTCGTGCCTTTGAGTAAATTCCTATTAAATAAAG 237208 30 100.0 34 .............................. CAGCTTGGCACCTCTCCGTCTGGTTTTATGCCTT 237144 30 100.0 36 .............................. ATGATGCCGTAATTTTTATAAAAGAAATTATAAAGG 237078 30 100.0 36 .............................. TTAAAGTCTGGAATGCACCAAGTTGTTTTAAAGCAA 237012 30 100.0 36 .............................. TTTTCTCAATCTCCTTTTTATTTGTGTTGGTTTCTT 236946 30 100.0 36 .............................. TCTTTAACCTTTTGGATTCCATTTAGACCAAATCCA 236880 30 100.0 36 .............................. TTTAAATTTTTCTCGTCTCTATATAGTTGTTGTTGT 236814 30 100.0 36 .............................. TCTGTTTCTTCTATATAAGTCATATTTTTGTTAATA 236748 30 100.0 36 .............................. TTACCTTTTCGTTTTTTGTAACGAACTTTATGAATA 236682 30 100.0 36 .............................. GAGAAAAACAAAAAGAAAAACAAGGAAGAAAAGAAA 236616 30 100.0 36 .............................. AGTAGCTAGCTGGTAAGGAGTTAAATTATGAACAAA 236550 30 100.0 35 .............................. TTATCTCTGTCTTGCGATATTTGTATAAATACATT 236485 30 100.0 36 .............................. ACACTTTCAAACATTTCTTTAAACTGGTCTGATATA 236419 30 100.0 37 .............................. AGCGTTATAGCTCCTCCACCACCAAATAAATCATAAA 236352 30 100.0 35 .............................. GAATGCTTAAGTCGTGGTATTAACTGGGAAGGGGT 236287 30 100.0 35 .............................. ATACCTAACAATCCTAAATACACAGATACCACTTA 236222 30 100.0 35 .............................. TCATAGAAGTTTTTAAACTTATCTGATTTCTCAAA 236157 30 100.0 35 .............................. CTTTCTTCTACTAGAGTAGGCTTACCTTGTGGCTT 236092 30 100.0 36 .............................. AAAGAACTTCACAACTTATGTAAACAAGAGAGTTCC 236026 30 100.0 35 .............................. CACAACGAAGAAAATGTTAAATTGTTTAATTTAGA 235961 30 100.0 36 .............................. AATCAAAGAGCCAGCACTAAATAGCATTGTAAGAAT 235895 30 100.0 35 .............................. GCTGTCTTATCAACAAGGGCAACTTGAAGAGTTGT 235830 30 100.0 36 .............................. TCTAAGATTATGTTTGTTTTCTCATCCATAACTACG 235764 30 100.0 38 .............................. ATCCTTAGGTCGTCTCCAATTTCATACTTTTTGTCAAT 235696 30 100.0 36 .............................. TTATTAAATTCTACGCTCATAATTTCCTCCTTACTG 235630 30 100.0 37 .............................. CTATTGTAGTCTCTATTTATACCTTCATAATTTTCCA 235563 30 100.0 36 .............................. AAATATAATGGTTGGTATCAAGAATTTTTCCTATAT 235497 30 100.0 36 .............................. TCTGATTTTATTTTTTCAAGTATGAAATCACAATTT 235431 30 100.0 36 .............................. CATAAGACGTTTGTTACAATTGCAGAAGGTTGTGCA 235365 30 100.0 37 .............................. TTTATGGTTCTAAGCATTTTAGATTTATTTAAGGAGT 235298 30 100.0 35 .............................. TTGTCATTGTCTGTGTAAGAAAAATCCAATAAAAA 235233 30 100.0 37 .............................. GCTGGAGAAGATAATGTTTTATATTTGGTCGGTCCAA 235166 30 100.0 35 .............................. TTTGGTGGAGCTGAAAGAGAAACAGATGAACACTT 235101 30 100.0 34 .............................. AAATTTGGGTTAAAGATTTCCATTGCAGCAGTTG 235037 30 100.0 34 .............................. AGAGGAATGGAATATAAGATGTCCTAAATGTGGG 234973 30 100.0 35 .............................. TGGTCTCCGCCTTCTCCGACAAGTGCCATTTGCGG 234908 30 100.0 35 .............................. TGGAGATAGCATCAGGTTTGTTATCTCTTAACTGC 234843 30 100.0 36 .............................. ATGCTATCTTCCATTTGTTTTACTCCTGCCCCTGCT 234777 30 100.0 37 .............................. TTGGTATTGCAAAAATAAAATGACAGATAAGGACAAC 234710 30 100.0 36 .............................. ATCATTTCAAAATCTTTTAAATCTGTACCAAATTCT 234644 30 100.0 39 .............................. TCTTCTCACCTTCTCTCGTAAAAAAAATTTCATTTCACA 234575 30 100.0 35 .............................. CATCCTCACCCAAGTGTAGGAAATTTCATTTCACA 234510 30 100.0 35 .............................. GACATATTTTTATTTATATGAAGCTAGTACTCCAC 234445 30 100.0 37 .............................. ACGGTAAAATGTTTATATTTTTCTTGTTTTTCTTTAT 234378 30 100.0 35 .............................. AGGACTTGACCACTTATTTCATCAGCCGTTACTCC 234313 30 100.0 36 .............................. TCTTCTCACCTTCTCTCGTAAAAAAAAATTTTATTA 234247 30 100.0 35 .............................. CATCCTCACCCAAGTGTAGGAAATTTCATTTCACA 234182 30 100.0 36 .............................. GATTGCCCATCATAAAATCTAGGAATATACTTCAAA 234116 30 100.0 37 .............................. AGCCATATTTTTTTAAATAGCTTTTGTGCTCCTGTTC 234049 30 100.0 35 .............................. ATTATATTTTTACTAATCCTTATGGGAAGCATATA 233984 30 100.0 36 .............................. TCTTAAATAAAGTCGCAGTACCTTCAATTTTGCCAT 233918 30 100.0 36 .............................. CAAAAGGTTGTCAGTACTGTTAGAGAGAATTGATAA 233852 30 100.0 36 .............................. TCAGTAAACATAAGACAATCATCATTAAACTTAAGA 233786 30 100.0 37 .............................. CGTAACGTGTGCTTTCTTGAGAATTATGAACCACAAA 233719 30 100.0 35 .............................. CTATCTCCACACCAGTTTCTTCTTTTATAGTGTTT 233654 30 100.0 36 .............................. CCATCTGTGAATATTCTAGGCCAATCAGTTAATTCT 233588 30 100.0 232 .............................. CTGGGAAGAGGTAGGGCAGAAGACATTAGAGATGCTATATTGAAAGGAGGATTTGATGAAAAAGTATATTAAATATAATGATTATTTAGCTTGGTATGAATGGATTGAAGAAGATGAAGAATATCACGGCAGAATCTTAGGAGTTGAACCTATAATTGGGATTTATGGGGAAAACATAGAAGCATTAAAACAAGATTTTAAAAATGCTATTAAAGATTATGAAGAAGACTTT 233326 30 100.0 36 .............................. AGTTAAACTTGACAAAAGAAACAGGAAAGCTACATT 233260 30 100.0 36 .............................. AAGTTTTTCTTATTAAGATTTCCACTAAAATAAAGC 233194 30 100.0 36 .............................. TAGTGATGCTTTTTTTGATTCTTCTGTTTTATTAAA 233128 30 100.0 36 .............................. AGTTCTGCCTTAGTGCCATTATTAAAAATATATCTA 233062 30 96.7 36 ............T................. ATACTAGTGACACTTTCTGGAATTACTACTGATGTT 232996 30 86.7 0 .........C.....GT.....G....... | ========== ====== ====== ====== ============================== ======================================================================================================================================================================================================================================== ================== 71 30 99.8 39 CTTGACCAATAACATAAGATGTATTTAAAT # Left flank : TAGACTGCTACAAACTAATCAAATATATATTAGAAGATAAAAAATTTGAACCTTTTAATTTAGGAAGAAAATACTAATGGAAAAAAATTATAATTATGTATTTCTGTTTTATGACGTAGGAGAAAAAAGAGTTGGAAAGATATTTAAAATATGCAAAAAATATCTAACACATCATCAAATGTCAGTATTTCGAGGAGAAATAACACCATCAAAAATTATGGCGTTAAAAAGAGAAATAAAAAATTTAATAGAGCCAAATGAAGATTTTGTAACAATAATAAAAATGTATAGCAGAAATAACTTTGAAGAAGAAAGCATGGGAAGATCACACAAGATAGATATTGATATTAATGACATAATATAGTACCATGAAAATAACAAAAATAGCTAAAAATACAAGATTTATAAAAAATGAGATTAGCTGGTAAAAAAACCTTGAAAATAAGAAAATACCTAGAAATCTATAAAAATAAAACTTGAAGAAGGGCTAAATTACGTTA # Right flank : CTATTGAAAATTTCAACTGAAAAATGGTCCATATTTTTAATCGAAAAATGGTCCACTTATAGTATTTTCTCTTTACATAAATACTTAAATACTTCATTTCTTGTGAGGTAAGGTGAAAAATTTTAATTTTGATAAAATAAATTTTAAAATTATTATTAAATAGAATTCTTTTAATGAGTGTAGAAAAGAAAAATTAAATATTTTTTACACTCAATATTTGATATTAAAGATATTTTCAAAAACTATAAATTGCATATAAAATAATTTTAGGCTAAAAGCACAAACAATTTTATGTTATTGTGCTTTTTTGTATGTGATGGAATTTTTTAGATTTAATTATAATATATAAGCTTGCAAAATTATTATGAGATATTTTATATTTATTTTTATGAAAATTTGTTAAATTAAAGTAAAAACAAATATATTATCGACTATAAAACACCTTCCATATGTTAAAATAAAGGAAGTTAGGAGCGATAGATTGAAAAATAAATTACTTA # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.26, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGACCAATAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //