Array 1 441518-442584 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGLA010000003.1 Klebsiella grimontii strain 4928STDY7071327, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 441518 29 100.0 32 ............................. TCAGTAGTGCGATAGCGCCACGCTACCGGCTC 441579 29 96.6 34 ............................T GATAGCTCCAATATTCTCTGTCTGCGCGGCAAGC 441642 29 100.0 32 ............................. GCCGCAATGGACAGTGAGCCGGTGGCAGAGAT 441703 29 100.0 32 ............................. TAACAGCCGGAGATTTTATACAGTCCACTTTC 441764 29 100.0 32 ............................. ACTGCCGTCGGTCATATATGCGGTGACATATA 441825 29 100.0 32 ............................. GTTCCTGCCGTCTGTAGGCAGCGCTAAACTCT 441886 29 100.0 32 ............................. TTACCTTTGTCGCTTTTACAGAGGCAATGGAC 441947 29 100.0 32 ............................. CCGGTATCGCATCGTTTTGCTTTTACAACCTG 442008 29 100.0 32 ............................. GCCGCTGGCAGGTGATGCGGCGCGTTAGCGAT 442069 29 100.0 32 ............................. GCGTTAACCGCTATCGTGCTGGCTTCCGTCTC 442130 29 100.0 32 ............................. TCAACCCGAGAATCTGCGAGTTAGTGGCGCCA 442191 29 100.0 32 ............................. GACGCCGAACCAGAGGAGGATGAGCCAGAGGA 442252 29 100.0 32 ............................. TACAACATGCTGGCGCAGCGGCATACCATCAG 442313 29 100.0 32 ............................. CGTAACGCAAATTCAGGCAGATTATTTAACCC 442374 28 96.6 32 .............-............... ATTGATCGCGCTTTCTCGCGCATCTCAGAAGA 442434 29 96.6 32 ...............A............. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 442495 29 96.6 32 .............T............... AACAGCCCACAAAACTTTTTGCATGGGGCCGC 442556 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================== ================== 18 29 98.9 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGCGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACTATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCCTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATAGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 239111-237556 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABGLA010000002.1 Klebsiella grimontii strain 4928STDY7071327, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 239110 29 96.6 32 ............................T ATGTGACACCTATACAAACCAGTCCGGCAGGC 239049 29 100.0 32 ............................. CGACAGACGGGGCAGAAGCGGATTATCGCGAA 238988 29 100.0 32 ............................. GCTGGCTGATTCCGGCAGGGCCAACCGGCACA 238927 29 100.0 32 ............................. CGCCGCCCGCTTGCGCCAGGCTATCACCTCGC 238866 29 100.0 32 ............................. ACCGATTCCCGGAAAACATCGATGGGGAGGGC 238805 29 100.0 32 ............................. CGGTAAACCGAGGCGATCACGCATTGCCTCTT 238744 29 100.0 32 ............................. GGATTAAGCTGATTCTGGCTGACAGAACAACG 238683 29 100.0 32 ............................. GCTTAATACCAGAGTATGGTAATAAATCCGAT 238622 29 100.0 32 ............................. CCGCCTACCACATCTTTCACGTTGGCCGGAGT 238561 29 100.0 32 ............................. CCGTCAGGCTGCATTTGAAAAGTTGGAGCGCG 238500 29 100.0 32 ............................. ACCAGGTGACTGCGGATAGCCAGTCAGGCAGT 238439 29 100.0 32 ............................. ACACGATACGACTCACCAGGTGAAACGGGTAT 238378 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 238317 29 100.0 32 ............................. ATAGTTTTGTGGGTGCTAACAGTATTCCGGGA 238256 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 238195 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 238134 29 100.0 32 ............................. GCGAGGCGCGCAAATCATTCGATCGCGCAAGG 238073 29 100.0 32 ............................. GGTACTGCCCTGCACTGTCTGCTGCTGGAGCC 238012 29 100.0 32 ............................. TAGTTTACGTTCGAATCCACGCGGCCTGAATT 237951 29 100.0 32 ............................. CTTTGCAGCGCAGTTCCACTACTTGCAGCTCC 237890 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 237829 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 237768 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 237707 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 237646 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTTTGCGAAT 237584 29 86.2 0 ............TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 26 29 99.2 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTTATTATTTAGTGTGGCAAAGTCCAGTTCGAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //