Array 1 253676-254802 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JABUHD010000001.1 Gardnerella vaginalis strain UMB1698 ERS1455195_SC_contig000001, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	====================================	=============================	==================
    253676	    36	 100.0	    28	....................................	ACGTGTTCAAGTGATACGCGACTACTTA 	
    253740	    36	 100.0	    28	....................................	TTTCCAAAGATGAGAACGATCCGATAAT 	
    253804	    36	 100.0	    28	....................................	AATTTTTGGCGTTTACAATCTTTTGCGA 	
    253868	    36	 100.0	    28	....................................	ATTATCAAAGTACGGTAAAAGGATCTTT 	
    253932	    36	 100.0	    28	....................................	TGGTATTCGCTGCTGAAAATCGTTGGTA 	
    253996	    36	 100.0	    28	....................................	TAGTCGTAAAGATAGGGAAAAAGCAATA 	
    254060	    36	 100.0	    29	....................................	CCAGCAAACATTGTATGATACATATCCTT	
    254125	    36	 100.0	    28	....................................	CGTGCTGCGAGTCTAGTGTTCTCGTAAA 	
    254189	    36	 100.0	    28	....................................	AATCGGAGAGTTTATACAACGCGAAACT 	
    254253	    36	 100.0	    29	....................................	AGAATTGCACATTATTGATATTGTTTTTT	
    254318	    36	 100.0	    28	....................................	TGACCAAACTGTCACACCATTTTCAAAA 	
    254382	    36	 100.0	    28	....................................	AAACTTCAGCTGCATCGCGCAAAACTAT 	
    254446	    36	 100.0	    29	....................................	AAAGTGCTTGCATACCCTGTGCCTGCTTG	
    254511	    36	 100.0	    28	....................................	TATTGAAAGACGTGACAGCGGTTTTGCT 	
    254575	    36	 100.0	    28	....................................	CGATGATACAAGCCATGCGCTGCGATTA 	
    254639	    36	 100.0	    28	....................................	ACCACTCTCGACAATCTGCTGAGCGTAG 	
    254703	    36	 100.0	    28	....................................	CAAAGTTACACGTCTTGTCAAATTGCTG 	
    254767	    36	 100.0	     0	....................................	|                            	
==========	======	======	======	====================================	=============================	==================
        18	    36	 100.0	    28	CAATTATATCAAGAATGGTAGAAGCTAATTTTCAAC	                             	       

# Left flank :   TAATGGTTCTGGACATACGATTCCTAGTGCATTATCTGATTTAGCTCAATCATATGGTATCTATGCGGAAAAAGACGTGGAAGAATTTCAAGTACCACAATTCGTAAGGAGTGGATTATGAAAGTCGATGAGGACAGTGGTGGCATGTGGTGTTTAGTAATGTTTGATTTACCAGTGAAAACAAAAGTGGAGCGTCATGCTGCAACTGTATTTCGCAATATGCTGCTTGATATGGGATATGCAATGGTGCAATTTTCTGTATATGTTCGTTATAGTCCCACTCAAACAGGAAATAGAACTTCAGTAAAAATAATTAAGGATAATCTTCCGCCGCGTGGATCTATACGCATTTTACATGTCAGTGATCATCAATGGTCATCTGCGCAACGTTATTACAATGCCAGGCAAGAAAAGAAAGAAGAAACCCCAGATATCGCTATGCTTTTTTAATCGTAAAAAGCTTTATAATAGTTGAAATTCTACCATTCTTGACGATATAC
# Right flank :  CTAATAAATAAAAACGGGGAAGCTGGAAAGCTTCCCCTGCAGTGATAATCATCAAAACTGCTGAGCAATCAAACTGGATAACAAGTCCAGTCTTATTGAAAATTAGCACTCTTAATATATCATTTTTACGAAATAAAAAACAAGTGAACTTTTCTAAGTTTTGCTAAAAAATTTAAAAAATAACATATTGATATAATCAATAGATAGTGTAGTTGAAAATATTTTCGCTTTACGCATGTTCGCGTTTTCTAAAAAATGTCTTCTGGGAGTGTATGTAGGACTATAGGGTCAAAAGTGTGTAAATCTAAGCTGTGATGAATATTCTGTGACATAAACTAGCCTCAGCACTGTTACTAACTCAGTTATCTAACTGAAAAAATAACGGTAATCACCCAAACACTGTTAAAAACTCAGTCAGCAGACTGAGAAAACAACGGTCATGCGTTACTAGTGCAGTAAGTAGACTGCGCTAATAACGAATAATTGAGATTTATCGTTAC

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CAATTATATCAAGAATGGTAGAAGCTAATTTTCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.30,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.64,0   Confidence: HIGH] 

# Array family : NA
//