Array 1 79525-76689 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVXC010000006.1 Halomonas taeanensis strain As1101 NODE_6_length_182810_cov_40.6354, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 79524 29 100.0 32 ............................. GCCGCGCAGGCAGCGGCCGGGATGAGAACGTC 79463 29 100.0 33 ............................. TTTGCCGGTGACGACATAAACAGCCATTAGATA 79401 29 96.6 32 ............................A TCAAGAGTCCCGAAATTAACTAGAAAATCGAC 79340 29 100.0 32 ............................. TCGGCCTCGACCGGATCGGAGGCCATGACGCC 79279 29 100.0 32 ............................. CGACCAGATGCAGGGGTTCGAGATAAATGTGG 79218 29 100.0 32 ............................. CTCGTTATCTGAGCCCTTGCCGACGCCGATCT 79157 29 100.0 32 ............................. GGACTGTCAGACTCCACCGCTATCGCCGGATA 79096 29 100.0 32 ............................. CCCAACGATCAGAACTACAAGGTGGACTGGAC 79035 29 100.0 32 ............................. TTTACTGAATCGCGGTATGACTTTCTCTTATA 78974 29 100.0 32 ............................. TCCTGCCATGGTGTCACCTCCCGGTGAGTGTT 78913 29 100.0 32 ............................. CTGAATGCCGGTGACATCGCCGGTGCCTGTAA 78852 29 100.0 32 ............................. GCAAGAACCATGTCAGACACCGACTATAACAG 78791 29 100.0 32 ............................. GTCATCGTCGGTATCCCAGCCCAGCAGGCGAA 78730 29 100.0 32 ............................. CCGACCTTCATCAAGGGGTATCGCGCCGATAC 78669 29 100.0 32 ............................. CGCCCGCGCGGCCCTGCTCCACCCAGGCGCGC 78608 29 100.0 32 ............................. CGCTCATAGCCATCGACTCGCCGGAAGCCGCC 78547 29 100.0 32 ............................. CCATCGCCAACGGCGCGCTGAATAACTCGGAG 78486 29 100.0 33 ............................. CGCGTAATTCTTCGTCTAGCGACCGTTCTTCTT 78424 29 100.0 32 ............................. GTCTTTTCATTCTTCTGATCGGTTTTGGAATG 78363 29 100.0 32 ............................. CGATCGGCACCGGCAACGACTCTTACGACGAA 78302 29 100.0 32 ............................. CTTCCAGGGAGTCGGTCAGGCTGTCGGCGGTG 78241 29 100.0 32 ............................. TTCAGCCTGAGGGGGGCGATAGTGATGGTTAG 78180 29 100.0 32 ............................. CATCCATTTCAGGCCGTAACGCAGGCACCAGG 78119 29 100.0 32 ............................. TGCCAACAAATTTTCAGTTGATTGTGTAAAGC 78058 29 100.0 32 ............................. GGTCAGGAGGTTTCAGACCATACGAACCGCCG 77997 29 100.0 32 ............................. GTGCATACCCGCGTTACCGGCACCGCGGCCAG 77936 29 100.0 32 ............................. GGAGGGACACCCATTGAAACCGATAGACGTAC 77875 29 100.0 32 ............................. AATGCCCGGCTGCAGGCCATTGCCGATGCGGC 77814 29 100.0 32 ............................. AATGAGGCATGGTCGGCATTCATCGAGGATCC 77753 29 100.0 32 ............................. CGCAGCGGAACCGCCGGTGACCGCATGGGCCA 77692 29 100.0 32 ............................. TATTACGGCGTCGGCGCCCTGCTGGCCCTGGA 77631 29 100.0 32 ............................. CCGGGAGGTGCCGAGTGACCCAACCCACCCAC 77570 29 100.0 32 ............................. CGCATGAAGCGCCCGTCCGACGGCGGATTATC 77509 29 100.0 32 ............................. CGTCGCCAGTTGCGCGACTACACCCTGGTCAT 77448 29 100.0 32 ............................. GTCGCCCAGCAGCGACTGGCGATCCTCGAGGA 77387 29 100.0 32 ............................. TCGCCTAGCACGTATCCCGGATCTGTTGCATG 77326 29 100.0 32 ............................. CAAAGCCCCACCGCCTTCGGGCGGTGGGGCTT 77265 29 100.0 32 ............................. GGGGACATATTGATGGCTTTATGTGACATAAA 77204 29 100.0 32 ............................. CAGATACGTCGGCGAACCTGGTTGCCACCATT 77143 29 100.0 32 ............................. GTTCGGTTGTCGTCATCGAAGACCCGCTTGGC 77082 29 100.0 32 ............................. AACACGCACCTGAGCCGCGAGGTCCGCCAGGC 77021 29 100.0 32 ............................. GGCACGAGGGTGAGTAGACGGAGCGCAAAGGT 76960 29 100.0 32 ............................. AGAGCGTCTTCCCACCAGATCGAGGCAGTGTC 76899 29 100.0 32 ............................. ACCGGGACGCCGCCGAGGACATGGCGCTAATC 76838 29 100.0 32 ............................. GCGCCCGATTCATTCGTGATGCCGGCCTGCGA 76777 29 100.0 32 ............................. TACCAGAATTACGCCCGCGACTCGGCATTCGG 76716 28 75.9 0 ................T.TT-.A.TG... | ========== ====== ====== ====== ============================= ================================= ================== 47 29 99.4 32 CCGATCCCCGCAGGCGCGGGGCTCAACCG # Left flank : GCGATATCGAGCCGCCTCCGCCAGCGCCGGAAGCCATGTTGCCCGCCATTCCCGAACCCGCCTCCGTGGGTGACCAGGGACACAGGAGCAAATGACATGGCCATGCTTGTCGTTGTGACAGAAGCCGTGCCACCGCGTTTGCGCGGTAGGCTCGCCATCTGGCTGCTGGAGATTCGTGCTGGGGTCTATGTGGGGGATGTCAGCCAGCGCATTCGCGAAATGATCTGGGAGCAGGTCGATGCATTGGCTGAAGACGGCAACGTTGCCATGGCCTGGTCCAGTAACCACGAATCAGGCTTTGAATTTCAGACCTATGGTTCCAACCGACGCGAGCCTATCGACCACGATGGGCTGCGTTTGGTGCGCTTTTTACCTCAAGAAACCAACTGATTGATTTTATTGGATCTTTAACAAAACGCATTGATCGAAAAATGAGCAAAATCGCTGGTGGAATTTCCAACAGCGATTTTGTTCTTTCTAAACAATCGTCTACGATTAGT # Right flank : CCCAGGCAGCTAGAGCGAGTGCTATCAACAGCACCGGTGAAGACACCGAGTATGGTATGAGGTGGTCTTAGGTGTTGGCCCCGCTGTTTCAGCGTTAGGCTGATTGTCCATATCCACCAGTGGAGTGCTGCCATGACGTCTTCTTTTGATCAGGCGCTTGCCGCTCTCGATGCCTTGCATGGGCAAGACCCAAGAAGTGTCGAGGTCGAGGGCGAGTTGCTACCCCGCGAGCTGTGGCATGCGCGGCGGATGAGTGCCTGGCTGTCGAGCCTGCGAGATTCGCCGGATGAGTTGTTGTGGCTGGCGGTACGCGGTCAGCATCTGCAGCGCTGGCAGGTGCCGCGCGAGGATTACCCGGAGGGCCGAGTAGGGTATCTCACCTGGCGGCGCGATCAGGGCCGGCGGGCCGGCGAGATCACGGCGAAGGCGATGGAAGAGGCCGGTTACTCGTCCGAGCAGGCCGAACGCGTGGCGCAAATGATCCGCAAGCAGGGCCTGGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCAGGCGCGGGGCTCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGATCCCCGCAGGCGCGGGGCTCAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 95572-91393 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABVXC010000006.1 Halomonas taeanensis strain As1101 NODE_6_length_182810_cov_40.6354, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 95571 29 100.0 33 ............................. ACCTGGGGATGCGGCACATCGAGTTGCGGCAAC 95509 29 100.0 32 ............................. CCGAAATGGCGCAGCAACTCGACTAGGATCGG 95448 29 100.0 32 ............................. CTTCTTGCCGGCGGCGCCTCCGCCCTGGCTGC 95387 29 100.0 32 ............................. GTTTCGAGGATGATGCCGCCACCGTCGCTGAC 95326 29 100.0 32 ............................. GTGCGCTCGGTCTGCTCGGGCTCCACGATCTC 95265 29 100.0 32 ............................. AATCTTGCCCAATCTGTTTTATAGCATTAGAA 95204 29 100.0 32 ............................. GGTGTAGCTGTCGGTGATGTCGTCCCAGGTGG 95143 29 100.0 32 ............................. CAAGGCACCGCGCGAAGCGGCGGCCTGACGCT 95082 29 100.0 32 ............................. CCCACGCCTGACCCGGCCCCGCCACGCAATCG 95021 29 100.0 32 ............................. GTAGCTGGCCGGGTCTCTCACCACCCGGCCAG 94960 29 100.0 32 ............................. TTACGCAACAAGGCCAACAGCGCCGAGGTGTA 94899 29 100.0 32 ............................. TCGATGCCCGAGATCCTCGAGGAGCTGCGCGG 94838 29 100.0 32 ............................. CGCCTATCGTCAGCTCAACCATCTGCCACAGG 94777 29 100.0 32 ............................. CATGGAACCCGAGTTCCACTCGGGTGACCGCA 94716 29 100.0 32 ............................. GTATTGCGAGGTTTTTCGGCCCGCCCAATGGG 94655 29 100.0 32 ............................. CGGATAACCTCCCAACGCCGCCGAATAAGCCA 94594 29 100.0 32 ............................. CTGAGCGAGCGAGCGGCGAACAGAACTCGCAA 94533 29 100.0 32 ............................. CATGCTCGTCATGATGATTAATATGGTTTATC 94472 29 100.0 32 ............................. GTGCCTCTTAATGTCTTCAAGGTTTACGGCTC 94411 29 100.0 32 ............................. GTGTTGATCCTCCCCCTTATATGACTCCTGAT 94350 29 100.0 32 ............................. GCGTCTTCAAGGATGACGGCGGCATTCTCGGC 94289 29 100.0 32 ............................. GTCGAAGCGTTGCTGGCGGATGCCGGCCGCCC 94228 29 100.0 32 ............................. GTATATACACGTCGCGGTTGGCTGATTGTCGA 94167 29 100.0 32 ............................. CCTGCCTCTATCACCCAGGAGCAATCCGCATG 94106 29 100.0 32 ............................. CGGGTGGCGTGCAGCTGGTGGCGGCCGACTTG 94045 29 100.0 32 ............................. GCGCCGTACTGGCTGACCTGAAAATCCAGGGC 93984 29 100.0 32 ............................. CGGATAGGGTGAACCCTGAGTGTGTAGAAATG 93923 29 96.6 32 .............A............... GCTACGAATGTTCTGAAAGTCATCGCCGCTAT 93862 29 100.0 32 ............................. CCACTTAGGCCGTCGTCCTATTCCCTGCCAAA 93801 29 100.0 32 ............................. TTGTATGTGTGCTCCTGGGCCGCTCGATTGAT 93740 29 100.0 32 ............................. ACCCGCTGAAAGCGGGCCAAGGGGGGAGGGAT 93679 29 100.0 32 ............................. CAAACCTCTTTCGCAGTGCCATAGAGGTAGCC 93618 29 100.0 32 ............................. TGCCCTTCCTGTGGCTGATCCACCAGAACGAG 93557 29 100.0 32 ............................. CTGTCATCAAACTTGGCGATGGAAAATATTGT 93496 29 100.0 32 ............................. CTGGCATCCCGGTCAGCGTTCTCGATAGGACC 93435 29 100.0 32 ............................. CCAGGGCATGAGCCCGAAGAGCGCGAGATCGT 93374 29 100.0 32 ............................. CTGGATAACGACATCGGCTGGCACAAGACGCT 93313 29 100.0 32 ............................. CCAGTGGCCCAGACATCTAATGCCTCGGTGCC 93252 29 100.0 32 ............................. CGACCTATACCTTGGAGCAATGGCGGAAGGTT 93191 29 100.0 32 ............................. GCGGGCGTCGATGCTGACGGCACGCACCAGAC 93130 29 100.0 32 ............................. TCGCCGCGGATGCGCTGGTCGCCGTTCTCGCC 93069 29 100.0 32 ............................. ACGCTGCTTGGTGTCGAACAGCTTGTTCAGTT 93008 29 100.0 33 ............................. TACAGCGTGGTCTTGACCGGCTCTTCATCAAGG 92946 29 100.0 32 ............................. GTCACGCGCAGTTCATAGCGCGCGCCCTGCCA 92885 29 100.0 32 ............................. CACGGCAACAACGAAACGCCCTGGATCAAGTG 92824 29 100.0 32 ............................. ATCACGTCCCAGCCCAACTTTCGAGCGTGCAG 92763 29 100.0 32 ............................. TGAAAGCGGCATGACCCGACCACGCGCGCACA 92702 29 100.0 32 ............................. GTACGATGCTATCGGCAGTCCCTGACTTCTCC 92641 29 100.0 32 ............................. AGCTGTGGACCGTTGAGCGTGCGACGTCCAAA 92580 29 100.0 32 ............................. TCGCTATTCGAGAAGGCGCGCACCTTTGTTGG 92519 29 96.6 32 ........T.................... TCGCCGCGGATGCGCTGGTCGCCGTTCTCGCC 92458 29 100.0 32 ............................. ATCCGCGAGCTGCTGCGTCGCCTGTTCCCGAT 92397 29 100.0 32 ............................. TCGTGGCAGGCCGTTACCGATCGCGAACAGCA 92336 29 100.0 32 ............................. GTATAGGTGAGGATCTGTTTATCGTCGGCCTC 92275 29 100.0 32 ............................. ATGCTCCTATCGGGGCGACGGGCGATGAGCGC 92214 29 100.0 33 ............................. GGCACGTCGCTCTCGATCTTGATGTCGGTCAGC 92152 29 100.0 32 ............................. CGTGCCGCCGACGGTGAGGCCGGTGACTTTTT 92091 29 100.0 32 ............................. TAACCTGTCTTGGCCCCGGACTCGCGGAATTC 92030 29 100.0 32 ............................. CGACCTATACCTTGGAGCAATGGCGGAAGGTT 91969 29 100.0 32 ............................. GCGGGCGTCGATGCTGACGGCACGCACCAGAC 91908 29 100.0 33 ............................. TACAGCGTGGTCTTGACCGGCTCTTCATCAAGG 91846 29 100.0 32 ............................. GGGGGGGTAAATCCCTACAGCCTTTCGCCAGC 91785 29 100.0 32 ............................. CTGGGACGCATTCTTTCAGCACAGTCAGACCG 91724 29 100.0 32 ............................. TATCCTCATTCCGTAACTTTCAGAGTTTGGAG 91663 29 100.0 32 ............................. ACTCGCTCGTCGTCCTTCGACTGCGCCTCGAT 91602 27 93.1 32 .....................--...... GTCAGTACCTGGCTGCGGTTCTCCCAGTCGCG 91543 29 100.0 32 ............................. GTCGAAATGTACGGTGTCCCCTGCATGAACCG 91482 29 100.0 32 ............................. TGTTGGCATCGACCGCTGGTAGCGTATCGAAG 91421 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 69 29 99.8 32 CCGATCCCCGCAGGCGCGGGGCTCAACCG # Left flank : TATAGCACAGACTCTCACTCATCTTTCGTGCTCGCCCACGGTGCCAGCAAGCTGAATGAAGGATTTCATCCTGGCCATTGATCGGCCCCAACCTGGTGATCGCGACTACGAAGCGGGTGAGCCACGGCGACGGCTCAGTGCAACCGCTAGCTCGCCATCTGGCTATTGGAGATTCGTGCGGGTGTCTATGTGGGCGATGTCAGCCAACGCATTCGCGAAATGATCTGGGAGTAGGTCGATGCATTGGCCGAAGACGGTAATGTTGCCATGGCCTAGTCTAGCAACCACGAATCCGGGCCTGAATTTCAGGCCTACGGTACCAATCGACGCTAGCCTATCGACCATGATGGGTTGCGTCTGGTGCGCTTTTTACCCCAAGAAACCAACTGATTGATTTTATTGGATCTTTAACAAAACGCACTGATCAAAAAATGAGCAAAATCGCTGGTGGAATTTCCAACAGCGATTTTGTTCTTTTTAAACAATCGTCTACGATTAGT # Right flank : TAAGCGAAAGTAGTCGGTGGTATTCAGGGTGGGTGCGCTAGGCGTCGTCTTCTGGAGACTTGCTGCCTGTACGTTGCTTTTCCAAGATGCGAGGAGCAACGAATATCGCGACCATGCCAACGAGATCCAGCGTTCCGATCACACCCGCAGCGACAGAGCTGAAGGGTGCGATCACGGTGGCTGCCACGAGGCCGACGATGGCAACGGTCAGCCCGTATCGTTGTCCACGTTCATCTTTCTTGATCGCACCCTCCAGACCCTTGCGACGCATGTCGTGCGTATGGTGCTGTTCGTCGACGGCCATATTCACGATGAGGCGGCGCGTTTCCTCATCATAGGCATTCAGTTGCTCGGGAGGCGGGAGGGGGCCTTGATAGCTCACTTGCCGCATCATGGCGACGGATTGGTTTTGGGGCTCAGGGGCGGGGGCATTGACGATCAAATCGCCTAACCGTACCTGTTCTTCCTCGGAAAGCTGTCCATGATGCAACTGCTCAATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCAGGCGCGGGGCTCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGATCCCCGCAGGCGCGGGGCTCAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //