Array 1 912236-914251 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071096.1 Fusobacterium nucleatum subsp. polymorphum strain THCT7E2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 912236 30 100.0 37 .............................. TTTTAAAAAGCTATGTCAAATTTAACACTTTTATTGG 912303 30 100.0 35 .............................. AATAAAAGCATTTGGTAGAAAAATAAAAAATGGAA 912368 30 100.0 37 .............................. GAGTTAAGACTTGCAGAACATGAAAAAACTGATGATG 912435 30 100.0 35 .............................. AATGGAAAGACTACATCATTTACTGCTTATGATAT 912500 30 100.0 37 .............................. GATAATACGTTTGGAGCCATTTCTTTAAAATATACTT 912567 30 100.0 36 .............................. AGTAATTTATTATCATTAGTTAAAGAGTTTAACCAA 912633 30 100.0 37 .............................. TATTACGAATTAAGGTTTTCTATTGAAAAAGTAACAA 912700 30 100.0 35 .............................. CAATGGAGCTTGAAATTGAAAGAATGAACAAATTA 912765 30 100.0 35 .............................. AAGTGTGATATTTACTAGGTTGAGGTATTTTAATC 912830 30 100.0 35 .............................. CCATAGAATCACATCCAGCTTTCCAAAACTATAAA 912895 30 100.0 38 .............................. TGGGTAACTTGGAAAGAAATTGTTAAAGAATTTCTTGA 912963 30 100.0 36 .............................. CTTGAAAGATTACAGATAGAGGCTTATATTGATAGA 913029 30 100.0 37 .............................. AATAAAGTAGATTTAATTATAGATGGGATTAGAATGT 913096 30 100.0 36 .............................. TGGATTAAATTAAGTTGAATATATCTAATATTAATT 913162 30 100.0 36 .............................. AATGTAGTAAATTTCATAAAAGAACTTATAAAAGAG 913228 30 100.0 37 .............................. CCTAAACTTCAAAGAATAAATCAGCTGATAATTCTCT 913295 30 100.0 35 .............................. CAAGGAGATATGGAAAATTCAAGAGGTTATTTAGG 913360 30 100.0 36 .............................. TGTTGATACAATTTATTCTGTTCCTCTGCTGTTCTT 913426 30 100.0 36 .............................. AAGAAACTTATCAAGAGAACAAGAGAAAAATATAGT 913492 30 100.0 36 .............................. ATAACTAACATTGTAAAACCAGACTGTAAATTATTA 913558 30 100.0 35 .............................. GAAGCTAAGGAAAAGAAAAAAATATCTGCTATGAA 913623 30 100.0 37 .............................. TACAAAGTTTATGGAGCTTATATATCATCTCAACATA 913690 30 100.0 37 .............................. GGCAATGATTTTATTTTTTGCCCTAAGTTTGAGAAAA 913757 30 100.0 35 .............................. AACATATCAAGAGAATTTGAAATGATTGATTATGA 913822 30 100.0 35 .............................. TTGTTCTAAATCAGCTGGTCTCCAAGGTACATCTA 913887 30 100.0 39 .............................. TTTTCTCTTATATACTCAATCAATTCTTTTAAATCTTTA 913956 30 100.0 36 .............................. CTAATAAAAAAATTCTGTCACAGTACCTTTTTGATT 914022 30 100.0 37 .............................. AGGGTTAGAACTATTTATTTTCCATCTAAACACTGAA 914089 30 100.0 36 .............................. TAAAATAACTTTTCATCTTCATAAGAAAATGTAATT 914155 30 96.7 38 .............................G TGAATTTCTTTAAAATTTAATGTATAATTCAAGTATCA 914223 29 90.0 0 .......................-AA.... | ========== ====== ====== ====== ============================== ======================================= ================== 31 30 99.6 36 ATTTATGTATTTCTATATTAGAATTTAAAT # Left flank : TCTTTTCAAATGTGGTGGTGATAAAATGTATGTGGTTGCAGTGTATGATATTTCATTAGATGAAAAAGGTAATCGAAATTGGAGAAAAATTTTTGGAATTTGTAAAAGATATCTTCATCATATTCAAAATTCGGTCTTTGAAGGTGAATTATCAGAAGTTGATATTCAAAGGTTAAAATATGAAGTTTCAAAATACATTAGAGATGATTTAGATTCTTTTATAATTTTTAAATCAAGAAATGAAAGATGGATGGAAAAGGAAATGCTAGGTTTACAAGAAGATAAAACTGATAATTTCTTATAAAATTTATTGTCTACCTCTCATAATGTAAAATTACTGGAAGATTGACAAAAGTCAAAAAAGTCTTTATTTATAAATAAATTTAAGAAAATAAAAAAAAATTTAAGAAATTAAATTTTTTTATTTTTTATTAAAAAAACTTATATTGACAAAAAGATATTAAAAAAGTATTATATGGGAGTAGTTTTTTTAGGTAGCT # Right flank : TACAGAAGAAAGGAATTGAAAAATAAAGACTTAATGCTGTTATATAACAAAAGAATAAATAAAAAATTAAAAGGATTAACTCTAGTTTTTTATATAAGTTAATCCTTTTTAATAAGTTAAATTAAATTTATTCAATTTTTTAAGGGGAGTACATTTTTTATTATGTTAAGTATAGCTTTATAAAGTAAACTAAGAATTAAGTATTCATAAAGTAACAGAAAAATTAAAAAAACGAAATTCAACTAAAATATTAATATAATGAACACAAAAATTTAAGATAGAAAATAAAAATTATCAATTATTAAATTAATAAAATTTTATTAAAAATTAAGTGAATTTCACAATAAAAATATTGCATTTAATCGTAATTGGTGTTAATATATACTTAATAAATTTGAAAGATAAATTTAAAGTTTTATCTACTAAAAATAGGGAGTGATTATAATGAGTTTTTTAGGGCAAGTTAGAAAAAAAGCCTTACAAGCAAACAGAAGAATAGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATGTATTTCTATATTAGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:90.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 1917737-1914922 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071096.1 Fusobacterium nucleatum subsp. polymorphum strain THCT7E2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 1917736 37 100.0 40 ..................................... GTACGTCTAGCTTCATCATTACCTTCTAACCTCAAATGAT 1917659 37 100.0 38 ..................................... GCCTTGGCTTGTTACGGACTTTTTATGTCAATTTCTCT 1917584 37 100.0 39 ..................................... TTAAATTCTGGAAATTCCAATATATTAGCTTTTTCATAA 1917508 37 100.0 38 ..................................... TTTCTTTGAAATATCCCTTTATGTCCGTTTTTCATAGT 1917433 37 100.0 40 ..................................... ATAGTGCATCATCTCTAATAAATTATGATGAAAAATAAGT 1917356 37 100.0 41 ..................................... TCTTTCAGTTTCTGGTCTCCAAGTCCCTGCCATTACTTCAT 1917278 37 100.0 35 ..................................... TTTGAAATATTTTATATCTTAGTTTTATATTGATA 1917206 37 100.0 34 ..................................... AAAAAGCATAAATAAGGAAGCTCCAAGCTACACA 1917135 37 100.0 41 ..................................... AGAAGTTTATATGGTACATGCATTTGGATTTACTGGAGCAA 1917057 37 100.0 37 ..................................... ATGAAGCTACAAAAGATGCAAATAAAACTCTTGCTGT 1916983 37 100.0 40 ..................................... ACTAAAAACTACATTATTAACCGTAGTTAATATAGTTTGT 1916906 37 100.0 41 ..................................... TTATACACAAAGCTTCCATTAGTAATAGGCATATTACTTAG 1916828 37 100.0 37 ..................................... AGAAGCTAGCAAATCCTGATATAACTGTATCTATATA 1916754 37 100.0 37 ..................................... CGTCTTTCACGCTTTCTTATGTTTATCTCTATATCAA 1916680 37 100.0 38 ..................................... TTTCTTTGAAATATCCCTTTATGTCCGTTTTTCATAGT 1916605 37 100.0 40 ..................................... ATAGTGCATCATCTCTAATAAATTATGATGAAAAATAAGT 1916528 37 100.0 37 ..................................... TTTGGAGGTATTAAAATGAACAAACAAGAATTATTAA 1916454 37 100.0 34 ..................................... TTGGATTTCTATGTTCTTTAGTTCCAGCTTCAAC 1916383 37 100.0 37 ..................................... TACCTGTAAAATGGAAGATCCAGAACCTTTACCAAAA 1916309 37 100.0 39 ..................................... ACTACGCTCTGCTCTACGTCTAAGTCTTATAAGACTTTC 1916233 37 100.0 38 ..................................... CATCATAGTTTCCTCCAGCTTGCGTTATACCTTTTAAA 1916158 37 100.0 41 ..................................... TTGCTTCTGTTAAAGGAGGAGTAGTTGAAATACTAGATGGA 1916080 37 100.0 42 ..................................... TTCCTCTATTAAAATTTAAAAATATTGTTGTTTCTAGCATAA 1916001 37 100.0 36 ..................................... TTTATTAAATTCTTTCATTCTATTAGTCTCCTTTTT 1915928 37 100.0 36 ..................................... TAACAATAGGAGGTAAATATAAATGGCTATATTTTA 1915855 37 100.0 36 ..................................... TCATTCATTAATTTTATATCTGTATGAATAGTATCA 1915782 37 100.0 40 ..................................... TTCTTCAACTTCAGTTTTCGCTTCTGTTACAGGTGGTGTA 1915705 37 100.0 39 ..................................... TAAGAAATGCTTTAAACGCATACTGCTTTCCTGTCACAT 1915629 37 100.0 38 ..................................... AATAAATACTATAAGTTTACTATTCTTATTACTTACAG 1915554 37 100.0 38 ..................................... AAAAAAAGTGAATATTGATTACATTTTTACCAACACAA 1915479 37 100.0 38 ..................................... TATTACTTTCAATGTTTAAACTTTTGATTTTAACTACT 1915404 37 97.3 36 .........A........................... CTATCTTTATCTATAACAGAACCATTTCTTCTTAGT 1915331 37 94.6 39 .........AG.......................... GCATAAGTAGCCCATTTGATTATTTTGTCATCTGATTTA 1915255 37 97.3 36 .........A........................... CTTATTCTTTCTTGAACCTTTCTATTGTCTCCTTGA 1915182 37 94.6 38 .........A..............T............ TTTTGTAATTAATCTCTCATATAAAAGATTATTACACT 1915107 37 97.3 37 .........A........................... TTATGCTCTAACCCTCTATCTAAATAATCTCCTAAAA 1915033 37 94.6 38 .........A..............T............ AAGCCTGAGTTCTAGTTTTTTCAAAGAGTCTTTGTAAA 1914958 37 91.9 0 ........................T......A....A | ========== ====== ====== ====== ===================================== ========================================== ================== 38 37 99.1 38 ATATTGAAGGTTATCCATTTATAACAAGGTTTAAAAC # Left flank : TTCTATCTTTTCAGGTGAAAGAATAATAGATTTCTCTTTTGTTTTTACCAAAAAAGAATTTTTTTGTATGCTTATGTTTGTCCCCTCAGTTGAAATATATAAGTCCATAATATCCTCCTCTTAGAATTTTAAATAAAATAAATATAGTAGATAAAATTTAAAATAAAAATATTATACTAATATATTAACATAGTATTAAGAAAATAAACAATTTTTTTACTAAAAATAACTTTACATTTTTGTAAAGTTGGTGTAGAATAAATTACAAGCTAATTGCTTGTAATTTTTAGTTGCTAATGAACAATTTTTTAACATTTTATATTTTTATTTGAATTAAAGATAAATCTGCTTATTTTTTTATAGAAAAATAAAAAAAGATAGTAGATATTTAATATAAAAAATGAAAAAAGACTAAAAAATCGAAAAAATGTTCAATTGTTGCTACCCACTAAAAATTAAATTAAACAAGCATAAAATCAATATTCTTCTTTGAGTTAAGG # Right flank : AATAACCAATCGCATTTTTTATTTGCAATTGGTTATTTTATATTTAATCAAAATAATAGTTATCTACCTTATATAAAATTTTTTCTTTGCCTCTCTCATTAGATGGAGGCTCAATAAATTTTCTTAAATCTGCTTCATTTAGATTTTTTTCTTTTAATTCATCTATAACAATTTTATTCAAAGCTATAATAAACTTTTTAAAATCTACTTTTTTATTTTTATAAGTGTTAAATTTACAATTATAATTTTTTTCTAAATACTCCTTTAAATAAGCATCAGTAACTTCATAATCTTCTTTTGATATAATGGCATTTAAAATTCTTTCATTCCATTCATTTAGAATTATATTTTTGTCCTTTAAATCTATTTCTATCCCTAAATTTAAAAATTGTAAAACACCATCTTTATAGTTTATAATATTTGGAATTTTTTCCTTGAATGTAGAAAAATCAAATACTTTTTTAACAATATTTATATTTCTCTCAGTCCTTGAATTATCT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATATTGAAGGTTATCCATTTATAACAAGGTTTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //